RNA–Protein interactions for RNA: ENST00000260302.7

MMP13-201, Transcript of matrix metallopeptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP13, Length 2,716 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-201ENST00000260302 FGD1P98174 961 aa8.69□□□□□ -1.02
MMP13-201ENST00000260302 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
MMP13-201ENST00000260302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.67□□□□□ -1.02
MMP13-201ENST00000260302 IRX6P78412 446 aaPredicted RBP8.67□□□□□ -1.02
MMP13-201ENST00000260302 HSP90B1P14625 803 aaKnown RBP8.63□□□□□ -1.03
MMP13-201ENST00000260302 TRHP20396 242 aaPredicted RBP8.63□□□□□ -1.03
MMP13-201ENST00000260302 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
MMP13-201ENST00000260302 ZCCHC6Q5VYS8 1495 aaKnown RBP8.6□□□□□ -1.03
MMP13-201ENST00000260302 ARID3AQ99856 593 aa8.59□□□□□ -1.03
MMP13-201ENST00000260302 NPM3O75607 178 aaKnown RBP8.58□□□□□ -1.04
MMP13-201ENST00000260302 PAXIP1Q6ZW49 1069 aaPredicted RBP8.58□□□□□ -1.04
MMP13-201ENST00000260302 NECTIN2Q92692 538 aa8.58□□□□□ -1.04
MMP13-201ENST00000260302 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
MMP13-201ENST00000260302 WRNQ14191 1432 aaPredicted RBP eCLIP8.55□□□□□ -1.04
MMP13-201ENST00000260302 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
MMP13-201ENST00000260302 GLIPR1L2Q4G1C9 344 aa8.54□□□□□ -1.04
MMP13-201ENST00000260302 A0A0U1RQG5 324 aaPredicted RBP8.53□□□□□ -1.04
MMP13-201ENST00000260302 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
MMP13-201ENST00000260302 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.52□□□□□ -1.05
MMP13-201ENST00000260302 PUS7Q96PZ0 661 aaKnown RBP8.51□□□□□ -1.05
MMP13-201ENST00000260302 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
MMP13-201ENST00000260302 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
MMP13-201ENST00000260302 RSPH4AQ5TD94 716 aa8.5□□□□□ -1.05
MMP13-201ENST00000260302 HMGB1P09429 215 aaKnown RBP8.48□□□□□ -1.05
MMP13-201ENST00000260302 RSPH6AQ9H0K4 717 aa8.48□□□□□ -1.05
MMP13-201ENST00000260302 NOP58Q9Y2X3 529 aaKnown RBP8.47□□□□□ -1.05
MMP13-201ENST00000260302 NBR1Q14596 966 aa8.46□□□□□ -1.06
MMP13-201ENST00000260302 WASHC2AQ641Q2 1341 aa8.46□□□□□ -1.06
MMP13-201ENST00000260302 BCCIPQ9P287 314 aaKnown RBP eCLIP8.45□□□□□ -1.06
MMP13-201ENST00000260302 WASHC2CQ9Y4E1 1318 aa8.45□□□□□ -1.06
MMP13-201ENST00000260302 AAMPQ13685 434 aa8.45□□□□□ -1.06
MMP13-201ENST00000260302 RTL5Q5HYW3 569 aaPredicted RBP8.44□□□□□ -1.06
MMP13-201ENST00000260302 C1orf115Q9H7X2 142 aa8.44□□□□□ -1.06
MMP13-201ENST00000260302 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
MMP13-201ENST00000260302 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
MMP13-201ENST00000260302 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
MMP13-201ENST00000260302 USP35Q9P2H5 1018 aa8.42□□□□□ -1.06
MMP13-201ENST00000260302 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
MMP13-201ENST00000260302 NAP1L5Q96NT1 182 aaPredicted RBP8.39□□□□□ -1.07
MMP13-201ENST00000260302 ZNF692Q9BU19 519 aaPredicted RBP8.38□□□□□ -1.07
MMP13-201ENST00000260302 ZBTB7CA1YPR0 619 aa8.38□□□□□ -1.07
MMP13-201ENST00000260302 ITGAEP38570 1179 aa8.36□□□□□ -1.07
MMP13-201ENST00000260302 NPM1P06748 294 aaKnown RBP eCLIP8.35□□□□□ -1.07
MMP13-201ENST00000260302 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
MMP13-201ENST00000260302 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
MMP13-201ENST00000260302 FAM43AQ8N2R8 423 aa8.33□□□□□ -1.08
MMP13-201ENST00000260302 PAK3O75914 559 aaPredicted RBP8.33□□□□□ -1.08
MMP13-201ENST00000260302 PRDM10Q9NQV6 1147 aa8.32□□□□□ -1.08
MMP13-201ENST00000260302 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
MMP13-201ENST00000260302 RBM10P98175 930 aaKnown RBP8.32□□□□□ -1.08
MMP13-201ENST00000260302 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
MMP13-201ENST00000260302 TICAM2Q86XR7 235 aa8.32□□□□□ -1.08
MMP13-201ENST00000260302 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
MMP13-201ENST00000260302 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
MMP13-201ENST00000260302 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
MMP13-201ENST00000260302 ARID3CA6NKF2 412 aa8.31□□□□□ -1.08
MMP13-201ENST00000260302 CCER2I3L3R5 266 aa8.31□□□□□ -1.08
MMP13-201ENST00000260302 EEA1Q15075 1411 aa8.3□□□□□ -1.08
MMP13-201ENST00000260302 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
MMP13-201ENST00000260302 RAD21O60216 631 aa8.3□□□□□ -1.08
MMP13-201ENST00000260302 CERS3Q8IU89 383 aa8.3□□□□□ -1.08
MMP13-201ENST00000260302 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
MMP13-201ENST00000260302 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
MMP13-201ENST00000260302 ABCC9O60706 1549 aa8.29□□□□□ -1.08
MMP13-201ENST00000260302 KCTD17Q8N5Z5 321 aa8.28□□□□□ -1.08
MMP13-201ENST00000260302 RBM25P49756 843 aaKnown RBP8.28□□□□□ -1.08
MMP13-201ENST00000260302 ZBTB47Q9UFB7 747 aaPredicted RBP8.27□□□□□ -1.09
MMP13-201ENST00000260302 ANP32AP39687 249 aaKnown RBP8.27□□□□□ -1.09
MMP13-201ENST00000260302 RGS22Q8NE09 1264 aa8.26□□□□□ -1.09
MMP13-201ENST00000260302 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
MMP13-201ENST00000260302 NACADO15069 1562 aa8.25□□□□□ -1.09
MMP13-201ENST00000260302 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
MMP13-201ENST00000260302 FAM177A1Q8N128 213 aaPredicted RBP8.25□□□□□ -1.09
MMP13-201ENST00000260302 PIAS4Q8N2W9 510 aaPredicted RBP8.25□□□□□ -1.09
MMP13-201ENST00000260302 PKD2Q13563 968 aa8.24□□□□□ -1.09
MMP13-201ENST00000260302 KCNH8Q96L42 1107 aa8.24□□□□□ -1.09
MMP13-201ENST00000260302 RB1CC1Q8TDY2 1594 aa8.24□□□□□ -1.09
MMP13-201ENST00000260302 PRDM16Q9HAZ2 1276 aa8.24□□□□□ -1.09
MMP13-201ENST00000260302 CEP162Q5TB80 1403 aa8.23□□□□□ -1.09
MMP13-201ENST00000260302 NEFMP07197 916 aa8.23□□□□□ -1.09
MMP13-201ENST00000260302 DHX57Q6P158 1386 aaKnown RBP8.23□□□□□ -1.09
MMP13-201ENST00000260302 CENPJQ9HC77 1338 aaPredicted RBP8.23□□□□□ -1.09
MMP13-201ENST00000260302 GSE1Q14687 1217 aa8.23□□□□□ -1.09
MMP13-201ENST00000260302 CNPY4Q8N129 248 aa8.22□□□□□ -1.09
MMP13-201ENST00000260302 PSMD1Q99460 953 aa8.22□□□□□ -1.09
MMP13-201ENST00000260302 TNIKQ9UKE5 1360 aa8.21□□□□□ -1.09
MMP13-201ENST00000260302 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.09
MMP13-201ENST00000260302 NCAPD3P42695 1498 aa8.21□□□□□ -1.1
MMP13-201ENST00000260302 CLSTN1O94985 981 aa8.2□□□□□ -1.1
MMP13-201ENST00000260302 CALD1Q05682 793 aaKnown RBP8.18□□□□□ -1.1
MMP13-201ENST00000260302 BBXQ8WY36 941 aaPredicted RBP8.18□□□□□ -1.1
MMP13-201ENST00000260302 NCLP19338 710 aaKnown RBP8.18□□□□□ -1.1
MMP13-201ENST00000260302 FOXD4L1Q9NU39 408 aa8.17□□□□□ -1.1
MMP13-201ENST00000260302 CUX2O14529 1486 aa8.16□□□□□ -1.1
MMP13-201ENST00000260302 HSP90AA1P07900 732 aaKnown RBP8.16□□□□□ -1.1
MMP13-201ENST00000260302 ARID4BQ4LE39 1312 aaPredicted RBP8.15□□□□□ -1.1
MMP13-201ENST00000260302 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
MMP13-201ENST00000260302 PRDM4Q9UKN5 801 aa8.15□□□□□ -1.1
MMP13-201ENST00000260302 RSF1Q96T23 1441 aaPredicted RBP8.13□□□□□ -1.11
MMP13-201ENST00000260302 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms