RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
ALPK3-201ENST00000258888 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
ALPK3-201ENST00000258888 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.45
ALPK3-201ENST00000258888 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
ALPK3-201ENST00000258888 NPM1P06748 294 aaKnown RBP eCLIP17.83■□□□□ 0.44
ALPK3-201ENST00000258888 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
ALPK3-201ENST00000258888 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
ALPK3-201ENST00000258888 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
ALPK3-201ENST00000258888 BECN1Q14457 450 aa17.71■□□□□ 0.43
ALPK3-201ENST00000258888 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
ALPK3-201ENST00000258888 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
ALPK3-201ENST00000258888 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
ALPK3-201ENST00000258888 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
ALPK3-201ENST00000258888 SUPT16HQ9Y5B9 1047 aaKnown RBP17.68■□□□□ 0.42
ALPK3-201ENST00000258888 EEA1Q15075 1411 aa17.68■□□□□ 0.42
ALPK3-201ENST00000258888 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
ALPK3-201ENST00000258888 A0A0G2JS52 829 aa17.65■□□□□ 0.42
ALPK3-201ENST00000258888 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
ALPK3-201ENST00000258888 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
ALPK3-201ENST00000258888 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
ALPK3-201ENST00000258888 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
ALPK3-201ENST00000258888 ANP32EQ9BTT0 268 aa17.61■□□□□ 0.41
ALPK3-201ENST00000258888 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
ALPK3-201ENST00000258888 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
ALPK3-201ENST00000258888 TRIM44Q96DX7 344 aaPredicted RBP17.59■□□□□ 0.41
ALPK3-201ENST00000258888 GOLGA6L22H0YM25 854 aa17.58■□□□□ 0.4
ALPK3-201ENST00000258888 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
ALPK3-201ENST00000258888 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
ALPK3-201ENST00000258888 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
ALPK3-201ENST00000258888 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
ALPK3-201ENST00000258888 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
ALPK3-201ENST00000258888 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
ALPK3-201ENST00000258888 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
ALPK3-201ENST00000258888 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
ALPK3-201ENST00000258888 TNIKQ9UKE5 1360 aa17.56■□□□□ 0.4
ALPK3-201ENST00000258888 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
ALPK3-201ENST00000258888 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
ALPK3-201ENST00000258888 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
ALPK3-201ENST00000258888 RGS3P49796 1198 aa17.55■□□□□ 0.4
ALPK3-201ENST00000258888 TPRNQ4KMQ1 711 aa17.55■□□□□ 0.4
ALPK3-201ENST00000258888 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
ALPK3-201ENST00000258888 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
ALPK3-201ENST00000258888 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.39
ALPK3-201ENST00000258888 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
ALPK3-201ENST00000258888 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
ALPK3-201ENST00000258888 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
ALPK3-201ENST00000258888 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
ALPK3-201ENST00000258888 CDK11BP21127 795 aaKnown RBP17.47■□□□□ 0.39
ALPK3-201ENST00000258888 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
ALPK3-201ENST00000258888 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
ALPK3-201ENST00000258888 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
ALPK3-201ENST00000258888 FRAT1Q92837 279 aaPredicted RBP17.47■□□□□ 0.39
ALPK3-201ENST00000258888 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
ALPK3-201ENST00000258888 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
ALPK3-201ENST00000258888 CCNB3Q8WWL7 1395 aa17.42■□□□□ 0.38
ALPK3-201ENST00000258888 ZRSR1Q15695 479 aaKnown RBP17.41■□□□□ 0.38
ALPK3-201ENST00000258888 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
ALPK3-201ENST00000258888 DNTTIP2Q5QJE6 756 aaKnown RBP17.39■□□□□ 0.38
ALPK3-201ENST00000258888 NAP1L5Q96NT1 182 aaPredicted RBP17.39■□□□□ 0.38
ALPK3-201ENST00000258888 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
ALPK3-201ENST00000258888 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
ALPK3-201ENST00000258888 POGKQ9P215 609 aa17.36■□□□□ 0.37
ALPK3-201ENST00000258888 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
ALPK3-201ENST00000258888 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
ALPK3-201ENST00000258888 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
ALPK3-201ENST00000258888 HSP90AB1P08238 724 aaKnown RBP17.34■□□□□ 0.37
ALPK3-201ENST00000258888 NACADO15069 1562 aa17.34■□□□□ 0.37
ALPK3-201ENST00000258888 TAOK2Q9UL54 1235 aa17.33■□□□□ 0.36
ALPK3-201ENST00000258888 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
ALPK3-201ENST00000258888 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
ALPK3-201ENST00000258888 SOGA1O94964 1423 aa17.31■□□□□ 0.36
ALPK3-201ENST00000258888 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
ALPK3-201ENST00000258888 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
ALPK3-201ENST00000258888 OS9Q13438 667 aaPredicted RBP17.29■□□□□ 0.36
ALPK3-201ENST00000258888 LMOD2Q6P5Q4 547 aa17.28■□□□□ 0.36
ALPK3-201ENST00000258888 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
ALPK3-201ENST00000258888 TMF1P82094 1093 aa17.27■□□□□ 0.35
ALPK3-201ENST00000258888 SPRYD3Q8NCJ5 442 aa17.26■□□□□ 0.35
ALPK3-201ENST00000258888 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
ALPK3-201ENST00000258888 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
ALPK3-201ENST00000258888 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
ALPK3-201ENST00000258888 FGD1P98174 961 aa17.25■□□□□ 0.35
ALPK3-201ENST00000258888 MS4A1P11836 297 aa17.25■□□□□ 0.35
ALPK3-201ENST00000258888 ARHGAP35Q9NRY4 1499 aa17.24■□□□□ 0.35
ALPK3-201ENST00000258888 KCNJ4P48050 445 aa17.24■□□□□ 0.35
ALPK3-201ENST00000258888 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
ALPK3-201ENST00000258888 CUX2O14529 1486 aa17.24■□□□□ 0.35
ALPK3-201ENST00000258888 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
ALPK3-201ENST00000258888 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
ALPK3-201ENST00000258888 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
ALPK3-201ENST00000258888 RBM19Q9Y4C8 960 aaKnown RBP17.23■□□□□ 0.35
ALPK3-201ENST00000258888 FOXD1Q16676 465 aa17.23■□□□□ 0.35
ALPK3-201ENST00000258888 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
ALPK3-201ENST00000258888 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
ALPK3-201ENST00000258888 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
ALPK3-201ENST00000258888 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
ALPK3-201ENST00000258888 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
ALPK3-201ENST00000258888 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
ALPK3-201ENST00000258888 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
ALPK3-201ENST00000258888 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms