RNA–Protein interactions for RNA: ENST00000256951.9

EMP1-201, Transcript of epithelial membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMP1, Length 5,921 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-201ENST00000256951 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
EMP1-201ENST00000256951 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
EMP1-201ENST00000256951 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
EMP1-201ENST00000256951 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
EMP1-201ENST00000256951 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
EMP1-201ENST00000256951 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
EMP1-201ENST00000256951 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
EMP1-201ENST00000256951 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
EMP1-201ENST00000256951 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
EMP1-201ENST00000256951 WIZO95785 1651 aa13.11□□□□□ -0.31
EMP1-201ENST00000256951 CUX2O14529 1486 aa13.1□□□□□ -0.31
EMP1-201ENST00000256951 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
EMP1-201ENST00000256951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
EMP1-201ENST00000256951 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
EMP1-201ENST00000256951 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
EMP1-201ENST00000256951 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
EMP1-201ENST00000256951 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
EMP1-201ENST00000256951 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
EMP1-201ENST00000256951 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
EMP1-201ENST00000256951 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
EMP1-201ENST00000256951 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
EMP1-201ENST00000256951 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
EMP1-201ENST00000256951 CDCA8Q53HL2 280 aa13.01□□□□□ -0.33
EMP1-201ENST00000256951 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
EMP1-201ENST00000256951 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
EMP1-201ENST00000256951 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
EMP1-201ENST00000256951 IRX6P78412 446 aaPredicted RBP13□□□□□ -0.33
EMP1-201ENST00000256951 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
EMP1-201ENST00000256951 SMARCA4P51532 1647 aa13□□□□□ -0.33
EMP1-201ENST00000256951 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
EMP1-201ENST00000256951 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
EMP1-201ENST00000256951 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
EMP1-201ENST00000256951 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
EMP1-201ENST00000256951 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
EMP1-201ENST00000256951 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
EMP1-201ENST00000256951 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
EMP1-201ENST00000256951 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.33
EMP1-201ENST00000256951 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
EMP1-201ENST00000256951 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
EMP1-201ENST00000256951 NBR1Q14596 966 aa12.94□□□□□ -0.34
EMP1-201ENST00000256951 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
EMP1-201ENST00000256951 BCL11AQ9H165 835 aa12.93□□□□□ -0.34
EMP1-201ENST00000256951 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
EMP1-201ENST00000256951 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
EMP1-201ENST00000256951 BECN1Q14457 450 aa12.9□□□□□ -0.34
EMP1-201ENST00000256951 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
EMP1-201ENST00000256951 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
EMP1-201ENST00000256951 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
EMP1-201ENST00000256951 RGL3Q3MIN7 710 aa12.88□□□□□ -0.35
EMP1-201ENST00000256951 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
EMP1-201ENST00000256951 MYH16Q9H6N6 1097 aa12.87□□□□□ -0.35
EMP1-201ENST00000256951 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
EMP1-201ENST00000256951 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
EMP1-201ENST00000256951 HSPA5P11021 654 aaKnown RBP12.84□□□□□ -0.35
EMP1-201ENST00000256951 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
EMP1-201ENST00000256951 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
EMP1-201ENST00000256951 EIF5BO60841 1220 aaKnown RBP12.84□□□□□ -0.35
EMP1-201ENST00000256951 TMF1P82094 1093 aa12.82□□□□□ -0.36
EMP1-201ENST00000256951 PPP1R15AO75807 674 aaPredicted RBP12.81□□□□□ -0.36
EMP1-201ENST00000256951 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
EMP1-201ENST00000256951 CARMIL2Q6F5E8 1435 aa12.81□□□□□ -0.36
EMP1-201ENST00000256951 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
EMP1-201ENST00000256951 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
EMP1-201ENST00000256951 KANK1Q14678 1352 aa12.78□□□□□ -0.36
EMP1-201ENST00000256951 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
EMP1-201ENST00000256951 DCAF11Q8TEB1 546 aa12.78□□□□□ -0.36
EMP1-201ENST00000256951 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
EMP1-201ENST00000256951 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
EMP1-201ENST00000256951 FHOD3Q2V2M9 1422 aa12.77□□□□□ -0.37
EMP1-201ENST00000256951 MS4A1P11836 297 aa12.76□□□□□ -0.37
EMP1-201ENST00000256951 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
EMP1-201ENST00000256951 KTN1Q86UP2 1357 aaKnown RBP12.75□□□□□ -0.37
EMP1-201ENST00000256951 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
EMP1-201ENST00000256951 RALBP1Q15311 655 aa12.75□□□□□ -0.37
EMP1-201ENST00000256951 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
EMP1-201ENST00000256951 PKD2Q13563 968 aa12.74□□□□□ -0.37
EMP1-201ENST00000256951 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
EMP1-201ENST00000256951 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
EMP1-201ENST00000256951 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
EMP1-201ENST00000256951 GOLGA6L22H0YM25 854 aa12.73□□□□□ -0.37
EMP1-201ENST00000256951 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
EMP1-201ENST00000256951 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
EMP1-201ENST00000256951 KIF21BO75037 1637 aa12.73□□□□□ -0.37
EMP1-201ENST00000256951 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
EMP1-201ENST00000256951 PNNQ9H307 717 aaKnown RBP12.72□□□□□ -0.37
EMP1-201ENST00000256951 RBM19Q9Y4C8 960 aaKnown RBP12.72□□□□□ -0.37
EMP1-201ENST00000256951 CASC1Q6TDU7 716 aa12.69□□□□□ -0.38
EMP1-201ENST00000256951 NUP155O75694 1391 aa12.68□□□□□ -0.38
EMP1-201ENST00000256951 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
EMP1-201ENST00000256951 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
EMP1-201ENST00000256951 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
EMP1-201ENST00000256951 ARID4BQ4LE39 1312 aaPredicted RBP12.67□□□□□ -0.38
EMP1-201ENST00000256951 NCLP19338 710 aaKnown RBP12.66□□□□□ -0.38
EMP1-201ENST00000256951 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
EMP1-201ENST00000256951 FOXD1Q16676 465 aa12.66□□□□□ -0.38
EMP1-201ENST00000256951 TRIM44Q96DX7 344 aaPredicted RBP12.66□□□□□ -0.38
EMP1-201ENST00000256951 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
EMP1-201ENST00000256951 CUX1P39880 1505 aa12.65□□□□□ -0.38
EMP1-201ENST00000256951 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
EMP1-201ENST00000256951 POGKQ9P215 609 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms