RNA–Protein interactions for RNA: ENST00000256497.8

EDEM1-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDEM1, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-201ENST00000256497 DEKP35659 375 aaKnown RBP24.19■■□□□ 1.46
EDEM1-201ENST00000256497 NCLP19338 710 aaKnown RBP24.18■■□□□ 1.46
EDEM1-201ENST00000256497 GOLGA6L22H0YM25 854 aa24.15■■□□□ 1.46
EDEM1-201ENST00000256497 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.46
EDEM1-201ENST00000256497 STAG3Q9UJ98 1225 aa24.13■■□□□ 1.45
EDEM1-201ENST00000256497 NPM1P06748 294 aaKnown RBP eCLIP24.12■■□□□ 1.45
EDEM1-201ENST00000256497 AMER1Q5JTC6 1135 aaPredicted RBP24.12■■□□□ 1.45
EDEM1-201ENST00000256497 WDR43Q15061 677 aaKnown RBP eCLIP24.11■■□□□ 1.45
EDEM1-201ENST00000256497 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
EDEM1-201ENST00000256497 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
EDEM1-201ENST00000256497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.452e-6■■■□□ 14.9
EDEM1-201ENST00000256497 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
EDEM1-201ENST00000256497 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.03■■□□□ 1.44
EDEM1-201ENST00000256497 TPRNQ4KMQ1 711 aa23.99■■□□□ 1.43
EDEM1-201ENST00000256497 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
EDEM1-201ENST00000256497 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
EDEM1-201ENST00000256497 ARID4BQ4LE39 1312 aaPredicted RBP23.97■■□□□ 1.43
EDEM1-201ENST00000256497 SENP3-EIF4A1A0A087X0R7 540 aa23.97■■□□□ 1.43
EDEM1-201ENST00000256497 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.43
EDEM1-201ENST00000256497 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
EDEM1-201ENST00000256497 RBM19Q9Y4C8 960 aaKnown RBP23.89■■□□□ 1.41
EDEM1-201ENST00000256497 PLCB2Q00722 1185 aa23.86■■□□□ 1.41
EDEM1-201ENST00000256497 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
EDEM1-201ENST00000256497 B4GALNT3Q6L9W6 998 aa23.82■■□□□ 1.4
EDEM1-201ENST00000256497 KCNH8Q96L42 1107 aa23.81■■□□□ 1.4
EDEM1-201ENST00000256497 RGS3P49796 1198 aa23.8■■□□□ 1.4
EDEM1-201ENST00000256497 ZRSR1Q15695 479 aaKnown RBP23.8■■□□□ 1.4
EDEM1-201ENST00000256497 L1TD1Q5T7N2 865 aaKnown RBP23.79■■□□□ 1.4
EDEM1-201ENST00000256497 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
EDEM1-201ENST00000256497 MSNP26038 577 aaKnown RBP23.78■■□□□ 1.4
EDEM1-201ENST00000256497 PLEKHG5O94827 1062 aa23.76■■□□□ 1.39
EDEM1-201ENST00000256497 TSPY4P0CV99 314 aa23.76■■□□□ 1.39
EDEM1-201ENST00000256497 TSPY10P0CW01 314 aa23.76■■□□□ 1.39
EDEM1-201ENST00000256497 ARID3AQ99856 593 aa23.75■■□□□ 1.39
EDEM1-201ENST00000256497 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
EDEM1-201ENST00000256497 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
EDEM1-201ENST00000256497 CHAF1AQ13111 956 aaPredicted RBP23.7■■□□□ 1.38
EDEM1-201ENST00000256497 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
EDEM1-201ENST00000256497 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
EDEM1-201ENST00000256497 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
EDEM1-201ENST00000256497 CASC1Q6TDU7 716 aa23.67■■□□□ 1.38
EDEM1-201ENST00000256497 ZBTB7CA1YPR0 619 aa23.64■■□□□ 1.38
EDEM1-201ENST00000256497 SPRYD3Q8NCJ5 442 aa23.62■■□□□ 1.37
EDEM1-201ENST00000256497 PNNQ9H307 717 aaKnown RBP23.61■■□□□ 1.37
EDEM1-201ENST00000256497 GOLGA6L6A8MZA4 724 aa23.61■■□□□ 1.37
EDEM1-201ENST00000256497 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
EDEM1-201ENST00000256497 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
EDEM1-201ENST00000256497 CLIP1P30622 1438 aa23.59■■□□□ 1.37
EDEM1-201ENST00000256497 A0A0G2JS52 829 aa23.57■■□□□ 1.36
EDEM1-201ENST00000256497 MYO15BQ96JP2 1530 aa23.56■■□□□ 1.36
EDEM1-201ENST00000256497 HSCBQ8IWL3 235 aa23.55■■□□□ 1.36
EDEM1-201ENST00000256497 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
EDEM1-201ENST00000256497 PLEKHD1A6NEE1 506 aa23.5■■□□□ 1.35
EDEM1-201ENST00000256497 GZF1Q9H116 711 aaPredicted RBP23.5■■□□□ 1.35
EDEM1-201ENST00000256497 FRAT1Q92837 279 aaPredicted RBP23.49■■□□□ 1.35
EDEM1-201ENST00000256497 C14orf37Q86TY3 774 aa23.49■■□□□ 1.35
EDEM1-201ENST00000256497 TNNT3P45378 269 aaPredicted RBP23.49■■□□□ 1.35
EDEM1-201ENST00000256497 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
EDEM1-201ENST00000256497 NRDCO43847 1150 aa23.49■■□□□ 1.35
EDEM1-201ENST00000256497 PPP1R15AO75807 674 aaPredicted RBP23.48■■□□□ 1.35
EDEM1-201ENST00000256497 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
EDEM1-201ENST00000256497 DRC7Q8IY82 874 aa23.46■■□□□ 1.35
EDEM1-201ENST00000256497 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
EDEM1-201ENST00000256497 VSIG10Q8N0Z9 540 aa23.44■■□□□ 1.34
EDEM1-201ENST00000256497 TAOK2Q9UL54 1235 aa23.44■■□□□ 1.34
EDEM1-201ENST00000256497 HSP90AA2PQ14568 343 aaPredicted RBP23.42■■□□□ 1.34
EDEM1-201ENST00000256497 ERCC6Q03468 1493 aa23.39■■□□□ 1.33
EDEM1-201ENST00000256497 TULP1O00294 542 aaPredicted RBP23.38■■□□□ 1.33
EDEM1-201ENST00000256497 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
EDEM1-201ENST00000256497 GOLGA6L4A6NEF3 574 aa23.37■■□□□ 1.33
EDEM1-201ENST00000256497 SLKQ9H2G2 1235 aaPredicted RBP23.36■■□□□ 1.33
EDEM1-201ENST00000256497 KNSTRNQ9Y448 316 aa23.36■■□□□ 1.33
EDEM1-201ENST00000256497 GOLGA6L3A6NEY3 463 aa23.35■■□□□ 1.33
EDEM1-201ENST00000256497 KIAA2012Q0VF49 1180 aa23.35■■□□□ 1.33
EDEM1-201ENST00000256497 CFAP53Q96M91 514 aa23.35■■□□□ 1.33
EDEM1-201ENST00000256497 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
EDEM1-201ENST00000256497 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
EDEM1-201ENST00000256497 RSPH6AQ9H0K4 717 aa23.34■■□□□ 1.33
EDEM1-201ENST00000256497 IPO9Q96P70 1041 aaKnown RBP23.34■■□□□ 1.33
EDEM1-201ENST00000256497 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
EDEM1-201ENST00000256497 GBP4Q96PP9 640 aa23.3■■□□□ 1.32
EDEM1-201ENST00000256497 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
EDEM1-201ENST00000256497 NACADO15069 1562 aa23.28■■□□□ 1.32
EDEM1-201ENST00000256497 FGD1P98174 961 aa23.26■■□□□ 1.31
EDEM1-201ENST00000256497 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
EDEM1-201ENST00000256497 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
EDEM1-201ENST00000256497 NAP1L2Q9ULW6 460 aaPredicted RBP23.25■■□□□ 1.31
EDEM1-201ENST00000256497 CC2D1BQ5T0F9 858 aaKnown RBP23.25■■□□□ 1.31
EDEM1-201ENST00000256497 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
EDEM1-201ENST00000256497 PTMSP20962 102 aa23.24■■□□□ 1.31
EDEM1-201ENST00000256497 KCNJ4P48050 445 aa23.23■■□□□ 1.31
EDEM1-201ENST00000256497 MAPK8IP3Q9UPT6 1336 aa23.23■■□□□ 1.31
EDEM1-201ENST00000256497 TCERG1O14776 1098 aaKnown RBP23.21■■□□□ 1.31
EDEM1-201ENST00000256497 MS4A1P11836 297 aa23.2■■□□□ 1.3
EDEM1-201ENST00000256497 HAP1P54257 671 aaPredicted RBP23.19■■□□□ 1.3
EDEM1-201ENST00000256497 CHMP4BQ9H444 224 aaKnown RBP23.18■■□□□ 1.3
EDEM1-201ENST00000256497 TIMELESSQ9UNS1 1208 aa23.17■■□□□ 1.3
EDEM1-201ENST00000256497 CDCA8Q53HL2 280 aa23.16■■□□□ 1.3
EDEM1-201ENST00000256497 MCCP23508 829 aa23.15■■□□□ 1.3
EDEM1-201ENST00000256497 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms