RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 CLSTN1O94985 981 aa11.32□□□□□ -0.6
USP6-201ENST00000250066 PLPPR3Q6T4P5 718 aa11.32□□□□□ -0.6
USP6-201ENST00000250066 NOC3LQ8WTT2 800 aaKnown RBP11.31□□□□□ -0.6
USP6-201ENST00000250066 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
USP6-201ENST00000250066 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
USP6-201ENST00000250066 MSNP26038 577 aaKnown RBP11.3□□□□□ -0.6
USP6-201ENST00000250066 TONSLQ96HA7 1378 aa11.29□□□□□ -0.6
USP6-201ENST00000250066 FBLN2P98095 1184 aa11.29□□□□□ -0.6
USP6-201ENST00000250066 PNNQ9H307 717 aaKnown RBP11.28□□□□□ -0.6
USP6-201ENST00000250066 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
USP6-201ENST00000250066 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
USP6-201ENST00000250066 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
USP6-201ENST00000250066 FGD1P98174 961 aa11.27□□□□□ -0.61
USP6-201ENST00000250066 DRC7Q8IY82 874 aa11.27□□□□□ -0.61
USP6-201ENST00000250066 DDX10Q13206 875 aaKnown RBP11.26□□□□□ -0.61
USP6-201ENST00000250066 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
USP6-201ENST00000250066 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
USP6-201ENST00000250066 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
USP6-201ENST00000250066 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
USP6-201ENST00000250066 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
USP6-201ENST00000250066 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
USP6-201ENST00000250066 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
USP6-201ENST00000250066 ABCC9O60706 1549 aa11.22□□□□□ -0.61
USP6-201ENST00000250066 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
USP6-201ENST00000250066 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.62
USP6-201ENST00000250066 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.62
USP6-201ENST00000250066 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
USP6-201ENST00000250066 NPHP1O15259 732 aa11.2□□□□□ -0.62
USP6-201ENST00000250066 KCNJ4P48050 445 aa11.2□□□□□ -0.62
USP6-201ENST00000250066 CCDC180Q9P1Z9 1646 aa11.19□□□□□ -0.62
USP6-201ENST00000250066 C14orf37Q86TY3 774 aa11.19□□□□□ -0.62
USP6-201ENST00000250066 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
USP6-201ENST00000250066 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
USP6-201ENST00000250066 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
USP6-201ENST00000250066 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
USP6-201ENST00000250066 ARID3AQ99856 593 aa11.17□□□□□ -0.62
USP6-201ENST00000250066 SETQ01105 290 aaPredicted RBP11.15□□□□□ -0.62
USP6-201ENST00000250066 USP35Q9P2H5 1018 aa11.15□□□□□ -0.62
USP6-201ENST00000250066 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
USP6-201ENST00000250066 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
USP6-201ENST00000250066 GNL2Q13823 731 aaKnown RBP11.12□□□□□ -0.63
USP6-201ENST00000250066 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
USP6-201ENST00000250066 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
USP6-201ENST00000250066 ISY1Q9ULR0 285 aaKnown RBP11.1□□□□□ -0.63
USP6-201ENST00000250066 HSCBQ8IWL3 235 aa11.1□□□□□ -0.63
USP6-201ENST00000250066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.63
USP6-201ENST00000250066 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
USP6-201ENST00000250066 PDE4CQ08493 712 aa11.09□□□□□ -0.63
USP6-201ENST00000250066 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
USP6-201ENST00000250066 MCCP23508 829 aa11.07□□□□□ -0.64
USP6-201ENST00000250066 RGS3P49796 1198 aa11.06□□□□□ -0.64
USP6-201ENST00000250066 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
USP6-201ENST00000250066 CEP89Q96ST8 783 aa11.05□□□□□ -0.64
USP6-201ENST00000250066 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
USP6-201ENST00000250066 TPM4P67936 248 aa11.03□□□□□ -0.64
USP6-201ENST00000250066 DEKP35659 375 aaKnown RBP11.02□□□□□ -0.65
USP6-201ENST00000250066 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP6-201ENST00000250066 PTMSP20962 102 aa11.01□□□□□ -0.65
USP6-201ENST00000250066 PATL2C9JE40 543 aaKnown RBP11.01□□□□□ -0.65
USP6-201ENST00000250066 RRP12Q5JTH9 1297 aaKnown RBP11.01□□□□□ -0.65
USP6-201ENST00000250066 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
USP6-201ENST00000250066 CCDC34Q96HJ3 373 aa11□□□□□ -0.65
USP6-201ENST00000250066 SYAP1Q96A49 352 aaPredicted RBP11□□□□□ -0.65
USP6-201ENST00000250066 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
USP6-201ENST00000250066 MS4A1P11836 297 aa10.99□□□□□ -0.65
USP6-201ENST00000250066 SUPT16HQ9Y5B9 1047 aaKnown RBP10.99□□□□□ -0.65
USP6-201ENST00000250066 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
USP6-201ENST00000250066 HTATSF1O43719 755 aaKnown RBP10.99□□□□□ -0.65
USP6-201ENST00000250066 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
USP6-201ENST00000250066 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
USP6-201ENST00000250066 FRAT1Q92837 279 aaPredicted RBP10.99□□□□□ -0.65
USP6-201ENST00000250066 CFAP44Q96MT7 982 aa10.99□□□□□ -0.65
USP6-201ENST00000250066 GBP4Q96PP9 640 aa10.98□□□□□ -0.65
USP6-201ENST00000250066 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
USP6-201ENST00000250066 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP6-201ENST00000250066 KIAA1211Q6ZU35 1233 aa10.97□□□□□ -0.65
USP6-201ENST00000250066 TPM3P06753 285 aa10.97□□□□□ -0.65
USP6-201ENST00000250066 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
USP6-201ENST00000250066 NEUROD2Q15784 382 aa10.96□□□□□ -0.66
USP6-201ENST00000250066 HSP90AA2PQ14568 343 aaPredicted RBP10.96□□□□□ -0.66
USP6-201ENST00000250066 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
USP6-201ENST00000250066 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP6-201ENST00000250066 CREBRFQ8IUR6 639 aa10.94□□□□□ -0.66
USP6-201ENST00000250066 MIER1Q8N108 512 aa10.94□□□□□ -0.66
USP6-201ENST00000250066 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
USP6-201ENST00000250066 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
USP6-201ENST00000250066 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
USP6-201ENST00000250066 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
USP6-201ENST00000250066 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
USP6-201ENST00000250066 NUDCQ9Y266 331 aa10.93□□□□□ -0.66
USP6-201ENST00000250066 CDCA8Q53HL2 280 aa10.92□□□□□ -0.66
USP6-201ENST00000250066 GPS2Q13227 327 aa10.92□□□□□ -0.66
USP6-201ENST00000250066 TSPY4P0CV99 314 aa10.92□□□□□ -0.66
USP6-201ENST00000250066 TSPY10P0CW01 314 aa10.92□□□□□ -0.66
USP6-201ENST00000250066 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
USP6-201ENST00000250066 RASSF8Q8NHQ8 419 aa10.91□□□□□ -0.66
USP6-201ENST00000250066 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
USP6-201ENST00000250066 CCDC70Q6NSX1 233 aa10.91□□□□□ -0.66
USP6-201ENST00000250066 TSR1Q2NL82 804 aaKnown RBP10.9□□□□□ -0.66
USP6-201ENST00000250066 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms