RNA–Protein interactions for RNA: ENST00000249344.6

STRIP2-201, Transcript of striatin interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRIP2, Length 5,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRIP2-201ENST00000249344 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
STRIP2-201ENST00000249344 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
STRIP2-201ENST00000249344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■□□ 17.4
STRIP2-201ENST00000249344 SOGA1O94964 1423 aa17.58■□□□□ 0.41
STRIP2-201ENST00000249344 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.41
STRIP2-201ENST00000249344 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.4
STRIP2-201ENST00000249344 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
STRIP2-201ENST00000249344 CHGAP10645 457 aaKnown RBP17.56■□□□□ 0.4
STRIP2-201ENST00000249344 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
STRIP2-201ENST00000249344 SENP3-EIF4A1A0A087X0R7 540 aa17.54■□□□□ 0.4
STRIP2-201ENST00000249344 ANP32BQ92688 251 aaKnown RBP17.53■□□□□ 0.4
STRIP2-201ENST00000249344 NACADO15069 1562 aa17.52■□□□□ 0.4
STRIP2-201ENST00000249344 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
STRIP2-201ENST00000249344 PPP4R2Q9NY27 417 aa17.5■□□□□ 0.39
STRIP2-201ENST00000249344 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
STRIP2-201ENST00000249344 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
STRIP2-201ENST00000249344 ARXQ96QS3 562 aa17.47■□□□□ 0.39
STRIP2-201ENST00000249344 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
STRIP2-201ENST00000249344 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
STRIP2-201ENST00000249344 DDRGK1Q96HY6 314 aa17.42■□□□□ 0.38
STRIP2-201ENST00000249344 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
STRIP2-201ENST00000249344 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
STRIP2-201ENST00000249344 RGL3Q3MIN7 710 aa17.4■□□□□ 0.38
STRIP2-201ENST00000249344 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
STRIP2-201ENST00000249344 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
STRIP2-201ENST00000249344 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
STRIP2-201ENST00000249344 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
STRIP2-201ENST00000249344 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
STRIP2-201ENST00000249344 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
STRIP2-201ENST00000249344 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
STRIP2-201ENST00000249344 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
STRIP2-201ENST00000249344 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
STRIP2-201ENST00000249344 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
STRIP2-201ENST00000249344 GLIPR1L2Q4G1C9 344 aa17.34■□□□□ 0.37
STRIP2-201ENST00000249344 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
STRIP2-201ENST00000249344 BECN1Q14457 450 aa17.33■□□□□ 0.36
STRIP2-201ENST00000249344 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
STRIP2-201ENST00000249344 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.36
STRIP2-201ENST00000249344 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
STRIP2-201ENST00000249344 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
STRIP2-201ENST00000249344 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
STRIP2-201ENST00000249344 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
STRIP2-201ENST00000249344 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
STRIP2-201ENST00000249344 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
STRIP2-201ENST00000249344 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
STRIP2-201ENST00000249344 ESF1Q9H501 851 aaKnown RBP17.24■□□□□ 0.35
STRIP2-201ENST00000249344 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
STRIP2-201ENST00000249344 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
STRIP2-201ENST00000249344 RGS3P49796 1198 aa17.23■□□□□ 0.35
STRIP2-201ENST00000249344 CUX2O14529 1486 aa17.23■□□□□ 0.35
STRIP2-201ENST00000249344 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
STRIP2-201ENST00000249344 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
STRIP2-201ENST00000249344 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
STRIP2-201ENST00000249344 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
STRIP2-201ENST00000249344 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
STRIP2-201ENST00000249344 DEKP35659 375 aaKnown RBP17.18■□□□□ 0.34
STRIP2-201ENST00000249344 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
STRIP2-201ENST00000249344 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
STRIP2-201ENST00000249344 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
STRIP2-201ENST00000249344 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
STRIP2-201ENST00000249344 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
STRIP2-201ENST00000249344 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
STRIP2-201ENST00000249344 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
STRIP2-201ENST00000249344 FOXD1Q16676 465 aa17.13■□□□□ 0.33
STRIP2-201ENST00000249344 FTSJ3Q8IY81 847 aaKnown RBP17.12■□□□□ 0.33
STRIP2-201ENST00000249344 WIZO95785 1651 aa17.12■□□□□ 0.33
STRIP2-201ENST00000249344 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
STRIP2-201ENST00000249344 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
STRIP2-201ENST00000249344 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
STRIP2-201ENST00000249344 TMF1P82094 1093 aa17.07■□□□□ 0.32
STRIP2-201ENST00000249344 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
STRIP2-201ENST00000249344 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
STRIP2-201ENST00000249344 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
STRIP2-201ENST00000249344 NCLP19338 710 aaKnown RBP17.04■□□□□ 0.32
STRIP2-201ENST00000249344 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
STRIP2-201ENST00000249344 PKD2Q13563 968 aa17.04■□□□□ 0.32
STRIP2-201ENST00000249344 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
STRIP2-201ENST00000249344 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
STRIP2-201ENST00000249344 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
STRIP2-201ENST00000249344 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
STRIP2-201ENST00000249344 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
STRIP2-201ENST00000249344 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
STRIP2-201ENST00000249344 NUDCQ9Y266 331 aa17■□□□□ 0.31
STRIP2-201ENST00000249344 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
STRIP2-201ENST00000249344 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
STRIP2-201ENST00000249344 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
STRIP2-201ENST00000249344 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
STRIP2-201ENST00000249344 RALBP1Q15311 655 aa16.96■□□□□ 0.31
STRIP2-201ENST00000249344 MS4A1P11836 297 aa16.95■□□□□ 0.3
STRIP2-201ENST00000249344 IPO9Q96P70 1041 aaKnown RBP16.95■□□□□ 0.3
STRIP2-201ENST00000249344 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
STRIP2-201ENST00000249344 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
STRIP2-201ENST00000249344 PTMAP06454 111 aaKnown RBP16.93■□□□□ 0.3
STRIP2-201ENST00000249344 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
STRIP2-201ENST00000249344 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
STRIP2-201ENST00000249344 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
STRIP2-201ENST00000249344 NUP155O75694 1391 aa16.89■□□□□ 0.29
STRIP2-201ENST00000249344 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
STRIP2-201ENST00000249344 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
STRIP2-201ENST00000249344 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms