RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 PBRM1Q86U86 1689 aa28.37■■■□□ 2.13
TUBA4A-201ENST00000248437 CTTNBP2Q8WZ74 1663 aa28.37■■■□□ 2.13
TUBA4A-201ENST00000248437 EIF4G3O43432 1585 aaKnown RBP28.35■■■□□ 2.13
TUBA4A-201ENST00000248437 GRIN2BQ13224 1484 aa28.3■■■□□ 2.12
TUBA4A-201ENST00000248437 EFCAB5A4FU69 1503 aa28.27■■■□□ 2.12
TUBA4A-201ENST00000248437 MAP3K1Q13233 1512 aa28.24■■■□□ 2.11
TUBA4A-201ENST00000248437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
TUBA4A-201ENST00000248437 ADAMTS12P58397 1594 aa28.22■■■□□ 2.11
TUBA4A-201ENST00000248437 FHAD1B1AJZ9 1412 aa28.2■■■□□ 2.11
TUBA4A-201ENST00000248437 SNAPC4Q5SXM2 1469 aa28.2■■■□□ 2.1
TUBA4A-201ENST00000248437 CCER1Q8TC90 406 aaPredicted RBP28.2■■■□□ 2.1
TUBA4A-201ENST00000248437 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
TUBA4A-201ENST00000248437 KANK4Q5T7N3 995 aaPredicted RBP28.15■■■□□ 2.1
TUBA4A-201ENST00000248437 CFAP43Q8NDM7 1665 aa28.09■■■□□ 2.09
TUBA4A-201ENST00000248437 PCF11O94913 1555 aaKnown RBP28.09■■■□□ 2.09
TUBA4A-201ENST00000248437 SAMD9Q5K651 1589 aa28.07■■■□□ 2.08
TUBA4A-201ENST00000248437 RRBP1Q9P2E9 1410 aaKnown RBP28.07■■■□□ 2.08
TUBA4A-201ENST00000248437 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
TUBA4A-201ENST00000248437 FYCO1Q9BQS8 1478 aa28.05■■■□□ 2.08
TUBA4A-201ENST00000248437 FHOD3Q2V2M9 1422 aa28.05■■■□□ 2.08
TUBA4A-201ENST00000248437 HNRNPUL2Q1KMD3 747 aaKnown RBP28.02■■■□□ 2.08
TUBA4A-201ENST00000248437 CASKIN1Q8WXD9 1431 aa28■■■□□ 2.07
TUBA4A-201ENST00000248437 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
TUBA4A-201ENST00000248437 FMN1Q68DA7 1419 aa27.99■■■□□ 2.07
TUBA4A-201ENST00000248437 GRIN2AQ12879 1464 aa27.99■■■□□ 2.07
TUBA4A-201ENST00000248437 SYNJ2O15056 1496 aa27.98■■■□□ 2.07
TUBA4A-201ENST00000248437 FBLN2P98095 1184 aa27.97■■■□□ 2.07
TUBA4A-201ENST00000248437 P3H3Q8IVL6 736 aa27.96■■■□□ 2.07
TUBA4A-201ENST00000248437 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
TUBA4A-201ENST00000248437 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
TUBA4A-201ENST00000248437 IQGAP2Q13576 1575 aa27.89■■■□□ 2.06
TUBA4A-201ENST00000248437 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
TUBA4A-201ENST00000248437 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
TUBA4A-201ENST00000248437 NUP160Q12769 1436 aa27.78■■■□□ 2.04
TUBA4A-201ENST00000248437 LRRIQ1Q96JM4 1722 aa27.78■■■□□ 2.04
TUBA4A-201ENST00000248437 CHD1O14646 1710 aa27.77■■■□□ 2.04
TUBA4A-201ENST00000248437 UGGT2Q9NYU1 1516 aa27.75■■■□□ 2.03
TUBA4A-201ENST00000248437 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
TUBA4A-201ENST00000248437 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
TUBA4A-201ENST00000248437 HECW1Q76N89 1606 aa27.67■■■□□ 2.02
TUBA4A-201ENST00000248437 CLSPNQ9HAW4 1339 aa27.66■■■□□ 2.02
TUBA4A-201ENST00000248437 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
TUBA4A-201ENST00000248437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.64■■■□□ 2.02
TUBA4A-201ENST00000248437 DISP1Q96F81 1524 aa27.63■■■□□ 2.01
TUBA4A-201ENST00000248437 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
TUBA4A-201ENST00000248437 MTUS2Q5JR59 1369 aa27.61■■■□□ 2.01
TUBA4A-201ENST00000248437 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
TUBA4A-201ENST00000248437 KIAA0556O60303 1618 aa27.6■■■□□ 2.01
TUBA4A-201ENST00000248437 SUPT6HQ7KZ85 1726 aaKnown RBP27.6■■■□□ 2.01
TUBA4A-201ENST00000248437 JPH4Q96JJ6 628 aa27.59■■■□□ 2.01
TUBA4A-201ENST00000248437 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
TUBA4A-201ENST00000248437 NCOA2Q15596 1464 aa27.52■■■□□ 2
TUBA4A-201ENST00000248437 EPRSP07814 1512 aaKnown RBP27.51■■■□□ 2
TUBA4A-201ENST00000248437 ITGAEP38570 1179 aa27.51■■□□□ 1.99
TUBA4A-201ENST00000248437 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
TUBA4A-201ENST00000248437 FAM50AQ14320 339 aaKnown RBP27.5■■□□□ 1.99
TUBA4A-201ENST00000248437 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
TUBA4A-201ENST00000248437 SETD5Q9C0A6 1442 aa27.47■■□□□ 1.99
TUBA4A-201ENST00000248437 RAB3GAP2Q9H2M9 1393 aa27.47■■□□□ 1.99
TUBA4A-201ENST00000248437 MYOM3Q5VTT5 1437 aa27.46■■□□□ 1.99
TUBA4A-201ENST00000248437 PRG4Q92954 1404 aaPredicted RBP27.43■■□□□ 1.98
TUBA4A-201ENST00000248437 CARMIL2Q6F5E8 1435 aa27.43■■□□□ 1.98
TUBA4A-201ENST00000248437 RAPGEF6Q8TEU7 1601 aa27.42■■□□□ 1.98
TUBA4A-201ENST00000248437 CLASP1Q7Z460 1538 aa27.42■■□□□ 1.98
TUBA4A-201ENST00000248437 SHROOM2Q13796 1616 aa27.39■■□□□ 1.98
TUBA4A-201ENST00000248437 CDK13Q14004 1512 aaKnown RBP27.39■■□□□ 1.98
TUBA4A-201ENST00000248437 PTPN23Q9H3S7 1636 aa27.36■■□□□ 1.97
TUBA4A-201ENST00000248437 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
TUBA4A-201ENST00000248437 NUP153P49790 1475 aaKnown RBP27.34■■□□□ 1.97
TUBA4A-201ENST00000248437 ARID3CA6NKF2 412 aa27.33■■□□□ 1.97
TUBA4A-201ENST00000248437 PLB1Q6P1J6 1458 aa27.32■■□□□ 1.96
TUBA4A-201ENST00000248437 ZNF316A6NFI3 1004 aaPredicted RBP27.32■■□□□ 1.96
TUBA4A-201ENST00000248437 TCOF1Q13428 1488 aaKnown RBP27.31■■□□□ 1.96
TUBA4A-201ENST00000248437 MAPKBP1O60336 1514 aa27.29■■□□□ 1.96
TUBA4A-201ENST00000248437 MIA2Q96PC5 1412 aa27.27■■□□□ 1.96
TUBA4A-201ENST00000248437 HFM1A2PYH4 1435 aa27.24■■□□□ 1.95
TUBA4A-201ENST00000248437 DIEXFQ68CQ4 756 aaKnown RBP27.23■■□□□ 1.95
TUBA4A-201ENST00000248437 PTPRKQ15262 1439 aa27.23■■□□□ 1.95
TUBA4A-201ENST00000248437 OSCARQ8IYS5 282 aa27.22■■□□□ 1.95
TUBA4A-201ENST00000248437 PTPRGP23470 1445 aa27.22■■□□□ 1.95
TUBA4A-201ENST00000248437 CDK11AQ9UQ88 783 aaPredicted RBP27.19■■□□□ 1.94
TUBA4A-201ENST00000248437 ABCA8O94911 1581 aa27.18■■□□□ 1.94
TUBA4A-201ENST00000248437 ADCY10Q96PN6 1610 aa27.14■■□□□ 1.94
TUBA4A-201ENST00000248437 NAIPQ13075 1403 aa27.14■■□□□ 1.93
TUBA4A-201ENST00000248437 GCC2Q8IWJ2 1684 aa27.13■■□□□ 1.93
TUBA4A-201ENST00000248437 TROQ12816 1431 aaPredicted RBP27.13■■□□□ 1.93
TUBA4A-201ENST00000248437 AKNAQ7Z591 1439 aa27.13■■□□□ 1.93
TUBA4A-201ENST00000248437 ITSN2Q9NZM3 1697 aa27.09■■□□□ 1.93
TUBA4A-201ENST00000248437 UACAQ9BZF9 1416 aa27.08■■□□□ 1.93
TUBA4A-201ENST00000248437 DNMT1P26358 1616 aaKnown RBP27.04■■□□□ 1.92
TUBA4A-201ENST00000248437 ATP10BO94823 1461 aa27.03■■□□□ 1.92
TUBA4A-201ENST00000248437 TIMELESSQ9UNS1 1208 aa27.01■■□□□ 1.91
TUBA4A-201ENST00000248437 KIF14Q15058 1648 aa26.99■■□□□ 1.91
TUBA4A-201ENST00000248437 ABCC2Q92887 1545 aa26.98■■□□□ 1.91
TUBA4A-201ENST00000248437 DAPK1P53355 1430 aa26.97■■□□□ 1.91
TUBA4A-201ENST00000248437 ROCK1Q13464 1354 aa26.95■■□□□ 1.9
TUBA4A-201ENST00000248437 GPATCH8Q9UKJ3 1502 aaKnown RBP26.94■■□□□ 1.9
TUBA4A-201ENST00000248437 ABCC5O15440 1437 aa26.91■■□□□ 1.9
TUBA4A-201ENST00000248437 CAMSAP2Q08AD1 1489 aa26.9■■□□□ 1.9
TUBA4A-201ENST00000248437 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms