RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
IRF1-201ENST00000245414 IPO9Q96P70 1041 aaKnown RBP13.4□□□□□ -0.26
IRF1-201ENST00000245414 HNRNPUQ00839 825 aaKnown RBP eCLIP13.39□□□□□ -0.27
IRF1-201ENST00000245414 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
IRF1-201ENST00000245414 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
IRF1-201ENST00000245414 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
IRF1-201ENST00000245414 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
IRF1-201ENST00000245414 A0A0U1RQG5 324 aaPredicted RBP13.33□□□□□ -0.27
IRF1-201ENST00000245414 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
IRF1-201ENST00000245414 HIRIP3Q9BW71 556 aaPredicted RBP13.29□□□□□ -0.28
IRF1-201ENST00000245414 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
IRF1-201ENST00000245414 CCER2I3L3R5 266 aa13.27□□□□□ -0.28
IRF1-201ENST00000245414 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
IRF1-201ENST00000245414 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
IRF1-201ENST00000245414 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
IRF1-201ENST00000245414 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
IRF1-201ENST00000245414 GSE1Q14687 1217 aa13.24□□□□□ -0.29
IRF1-201ENST00000245414 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
IRF1-201ENST00000245414 SOGA1O94964 1423 aa13.23□□□□□ -0.29
IRF1-201ENST00000245414 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
IRF1-201ENST00000245414 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
IRF1-201ENST00000245414 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
IRF1-201ENST00000245414 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
IRF1-201ENST00000245414 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.3
IRF1-201ENST00000245414 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
IRF1-201ENST00000245414 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
IRF1-201ENST00000245414 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
IRF1-201ENST00000245414 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
IRF1-201ENST00000245414 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
IRF1-201ENST00000245414 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
IRF1-201ENST00000245414 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
IRF1-201ENST00000245414 PPP1R15AO75807 674 aaPredicted RBP13.14□□□□□ -0.31
IRF1-201ENST00000245414 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
IRF1-201ENST00000245414 RUSC2Q8N2Y8 1516 aa13.13□□□□□ -0.31
IRF1-201ENST00000245414 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
IRF1-201ENST00000245414 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
IRF1-201ENST00000245414 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
IRF1-201ENST00000245414 PDE4CQ08493 712 aa13.09□□□□□ -0.31
IRF1-201ENST00000245414 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
IRF1-201ENST00000245414 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
IRF1-201ENST00000245414 ARID4BQ4LE39 1312 aaPredicted RBP13.06□□□□□ -0.32
IRF1-201ENST00000245414 CLIP1P30622 1438 aa13.06□□□□□ -0.32
IRF1-201ENST00000245414 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
IRF1-201ENST00000245414 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
IRF1-201ENST00000245414 EEA1Q15075 1411 aa13.05□□□□□ -0.32
IRF1-201ENST00000245414 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
IRF1-201ENST00000245414 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
IRF1-201ENST00000245414 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
IRF1-201ENST00000245414 ARXQ96QS3 562 aa13.04□□□□□ -0.32
IRF1-201ENST00000245414 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
IRF1-201ENST00000245414 FGD1P98174 961 aa13.01□□□□□ -0.33
IRF1-201ENST00000245414 AAMPQ13685 434 aa13.01□□□□□ -0.33
IRF1-201ENST00000245414 SLC4A3P48751 1232 aa13□□□□□ -0.33
IRF1-201ENST00000245414 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
IRF1-201ENST00000245414 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
IRF1-201ENST00000245414 PDE4AP27815 886 aa12.97□□□□□ -0.33
IRF1-201ENST00000245414 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
IRF1-201ENST00000245414 RRAGDQ9NQL2 400 aaPredicted RBP12.97□□□□□ -0.33
IRF1-201ENST00000245414 VPS8Q8N3P4 1428 aa12.95□□□□□ -0.34
IRF1-201ENST00000245414 MRS2Q9HD23 443 aa12.95□□□□□ -0.34
IRF1-201ENST00000245414 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
IRF1-201ENST00000245414 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
IRF1-201ENST00000245414 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
IRF1-201ENST00000245414 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
IRF1-201ENST00000245414 PDIA4P13667 645 aaKnown RBP12.92□□□□□ -0.34
IRF1-201ENST00000245414 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
IRF1-201ENST00000245414 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
IRF1-201ENST00000245414 RGS3P49796 1198 aa12.9□□□□□ -0.34
IRF1-201ENST00000245414 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
IRF1-201ENST00000245414 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
IRF1-201ENST00000245414 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
IRF1-201ENST00000245414 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
IRF1-201ENST00000245414 NCAPD3P42695 1498 aa12.87□□□□□ -0.35
IRF1-201ENST00000245414 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
IRF1-201ENST00000245414 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
IRF1-201ENST00000245414 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
IRF1-201ENST00000245414 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
IRF1-201ENST00000245414 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
IRF1-201ENST00000245414 RAB3GAP2Q9H2M9 1393 aa12.84□□□□□ -0.35
IRF1-201ENST00000245414 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
IRF1-201ENST00000245414 POGKQ9P215 609 aa12.81□□□□□ -0.36
IRF1-201ENST00000245414 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
IRF1-201ENST00000245414 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
IRF1-201ENST00000245414 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
IRF1-201ENST00000245414 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
IRF1-201ENST00000245414 PDCL3Q9H2J4 239 aa12.79□□□□□ -0.36
IRF1-201ENST00000245414 MS4A1P11836 297 aa12.78□□□□□ -0.36
IRF1-201ENST00000245414 CLCN1P35523 988 aa12.78□□□□□ -0.36
IRF1-201ENST00000245414 FBLN2P98095 1184 aa12.78□□□□□ -0.36
IRF1-201ENST00000245414 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
IRF1-201ENST00000245414 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
IRF1-201ENST00000245414 ARID3AQ99856 593 aa12.78□□□□□ -0.36
IRF1-201ENST00000245414 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
IRF1-201ENST00000245414 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
IRF1-201ENST00000245414 EXOC6Q8TAG9 804 aa12.77□□□□□ -0.37
IRF1-201ENST00000245414 KIF21BO75037 1637 aa12.74□□□□□ -0.37
IRF1-201ENST00000245414 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
IRF1-201ENST00000245414 GOLGA6L3A6NEY3 463 aa12.74□□□□□ -0.37
IRF1-201ENST00000245414 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
IRF1-201ENST00000245414 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms