RNA–Protein interactions for RNA: ENST00000242728.4

BHLHE41-201, Transcript of basic helix-loop-helix family member e41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE41, Length 3,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41-201ENST00000242728 CNGB1Q14028 1251 aaPredicted RBP23.2■■□□□ 1.3
BHLHE41-201ENST00000242728 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
BHLHE41-201ENST00000242728 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
BHLHE41-201ENST00000242728 SOGA1O94964 1423 aa23.08■■□□□ 1.29
BHLHE41-201ENST00000242728 LAS1LQ9Y4W2 734 aaKnown RBP23.08■■□□□ 1.28
BHLHE41-201ENST00000242728 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
BHLHE41-201ENST00000242728 NEFMP07197 916 aa23.07■■□□□ 1.28
BHLHE41-201ENST00000242728 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
BHLHE41-201ENST00000242728 CCER2I3L3R5 266 aa23.05■■□□□ 1.28
BHLHE41-201ENST00000242728 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
BHLHE41-201ENST00000242728 CLIP1P30622 1438 aa23.03■■□□□ 1.28
BHLHE41-201ENST00000242728 GLIPR1L2Q4G1C9 344 aa23.03■■□□□ 1.28
BHLHE41-201ENST00000242728 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
BHLHE41-201ENST00000242728 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
BHLHE41-201ENST00000242728 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
BHLHE41-201ENST00000242728 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
BHLHE41-201ENST00000242728 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
BHLHE41-201ENST00000242728 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
BHLHE41-201ENST00000242728 IPO9Q96P70 1041 aaKnown RBP22.94■■□□□ 1.26
BHLHE41-201ENST00000242728 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
BHLHE41-201ENST00000242728 UBE2Q2Q8WVN8 375 aa22.92■■□□□ 1.26
BHLHE41-201ENST00000242728 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
BHLHE41-201ENST00000242728 POLR3GLQ9BT43 218 aa22.91■■□□□ 1.26
BHLHE41-201ENST00000242728 NESP48681 1621 aa22.91■■□□□ 1.26
BHLHE41-201ENST00000242728 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
BHLHE41-201ENST00000242728 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
BHLHE41-201ENST00000242728 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
BHLHE41-201ENST00000242728 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
BHLHE41-201ENST00000242728 MRS2Q9HD23 443 aa22.82■■□□□ 1.24
BHLHE41-201ENST00000242728 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
BHLHE41-201ENST00000242728 EEA1Q15075 1411 aa22.8■■□□□ 1.24
BHLHE41-201ENST00000242728 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
BHLHE41-201ENST00000242728 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
BHLHE41-201ENST00000242728 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
BHLHE41-201ENST00000242728 SENP3-EIF4A1A0A087X0R7 540 aa22.75■■□□□ 1.23
BHLHE41-201ENST00000242728 PKNOX2Q96KN3 472 aa22.75■■□□□ 1.23
BHLHE41-201ENST00000242728 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
BHLHE41-201ENST00000242728 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
BHLHE41-201ENST00000242728 CUX2O14529 1486 aa22.71■■□□□ 1.23
BHLHE41-201ENST00000242728 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
BHLHE41-201ENST00000242728 BRPF3Q9ULD4 1205 aa22.7■■□□□ 1.22
BHLHE41-201ENST00000242728 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
BHLHE41-201ENST00000242728 ARXQ96QS3 562 aa22.64■■□□□ 1.22
BHLHE41-201ENST00000242728 USP35Q9P2H5 1018 aa22.63■■□□□ 1.21
BHLHE41-201ENST00000242728 VSIG10Q8N0Z9 540 aa22.62■■□□□ 1.21
BHLHE41-201ENST00000242728 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
BHLHE41-201ENST00000242728 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
BHLHE41-201ENST00000242728 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
BHLHE41-201ENST00000242728 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
BHLHE41-201ENST00000242728 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
BHLHE41-201ENST00000242728 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
BHLHE41-201ENST00000242728 GSE1Q14687 1217 aa22.57■■□□□ 1.2
BHLHE41-201ENST00000242728 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
BHLHE41-201ENST00000242728 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
BHLHE41-201ENST00000242728 ZNF777Q9ULD5 760 aaPredicted RBP22.56■■□□□ 1.2
BHLHE41-201ENST00000242728 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
BHLHE41-201ENST00000242728 NAP1L5Q96NT1 182 aaPredicted RBP22.55■■□□□ 1.2
BHLHE41-201ENST00000242728 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
BHLHE41-201ENST00000242728 EIF4G2P78344 907 aaKnown RBP eCLIP22.44■■□□□ 1.18
BHLHE41-201ENST00000242728 SLC4A3P48751 1232 aa22.4■■□□□ 1.18
BHLHE41-201ENST00000242728 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
BHLHE41-201ENST00000242728 PDE4AP27815 886 aa22.39■■□□□ 1.17
BHLHE41-201ENST00000242728 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
BHLHE41-201ENST00000242728 CHIC2Q9UKJ5 165 aa22.39■■□□□ 1.17
BHLHE41-201ENST00000242728 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
BHLHE41-201ENST00000242728 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
BHLHE41-201ENST00000242728 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
BHLHE41-201ENST00000242728 TMC1Q8TDI8 760 aa22.36■■□□□ 1.17
BHLHE41-201ENST00000242728 CFTRP13569 1480 aa22.36■■□□□ 1.17
BHLHE41-201ENST00000242728 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
BHLHE41-201ENST00000242728 HSP90AA2PQ14568 343 aaPredicted RBP22.35■■□□□ 1.17
BHLHE41-201ENST00000242728 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
BHLHE41-201ENST00000242728 SYNJ1O43426 1573 aa22.33■■□□□ 1.17
BHLHE41-201ENST00000242728 NFKBIBQ15653 356 aa22.33■■□□□ 1.17
BHLHE41-201ENST00000242728 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
BHLHE41-201ENST00000242728 HSPA5P11021 654 aaKnown RBP22.33■■□□□ 1.16
BHLHE41-201ENST00000242728 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
BHLHE41-201ENST00000242728 NUDCQ9Y266 331 aa22.31■■□□□ 1.16
BHLHE41-201ENST00000242728 ZNF326Q5BKZ1 582 aaKnown RBP22.3■■□□□ 1.16
BHLHE41-201ENST00000242728 CCDC184Q52MB2 194 aa22.29■■□□□ 1.16
BHLHE41-201ENST00000242728 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
BHLHE41-201ENST00000242728 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
BHLHE41-201ENST00000242728 PODXL2Q9NZ53 605 aa22.28■■□□□ 1.16
BHLHE41-201ENST00000242728 WASHC2AQ641Q2 1341 aa22.28■■□□□ 1.16
BHLHE41-201ENST00000242728 C11orf95C9JLR9 678 aaPredicted RBP22.26■■□□□ 1.15
BHLHE41-201ENST00000242728 ZMYND15Q9H091 742 aa22.24■■□□□ 1.15
BHLHE41-201ENST00000242728 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
BHLHE41-201ENST00000242728 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
BHLHE41-201ENST00000242728 FAM43AQ8N2R8 423 aa22.22■■□□□ 1.15
BHLHE41-201ENST00000242728 IGF1RP08069 1367 aa22.21■■□□□ 1.15
BHLHE41-201ENST00000242728 CUX1P39880 1505 aa22.2■■□□□ 1.14
BHLHE41-201ENST00000242728 EXOC6Q8TAG9 804 aa22.18■■□□□ 1.14
BHLHE41-201ENST00000242728 AKNAQ7Z591 1439 aa22.18■■□□□ 1.14
BHLHE41-201ENST00000242728 WASHC2CQ9Y4E1 1318 aa22.16■■□□□ 1.14
BHLHE41-201ENST00000242728 L1TD1Q5T7N2 865 aaKnown RBP22.14■■□□□ 1.14
BHLHE41-201ENST00000242728 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.14
BHLHE41-201ENST00000242728 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
BHLHE41-201ENST00000242728 RGS3P49796 1198 aa22.13■■□□□ 1.13
BHLHE41-201ENST00000242728 KIF21BO75037 1637 aa22.13■■□□□ 1.13
BHLHE41-201ENST00000242728 FRAT2O75474 233 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms