RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 TRIM26Q12899 539 aaPredicted RBP37.19■■■■□ 3.54
RRP9-201ENST00000232888 SNAPC4Q5SXM2 1469 aa37.16■■■■□ 3.54
RRP9-201ENST00000232888 EFCAB5A4FU69 1503 aa37.11■■■■□ 3.53
RRP9-201ENST00000232888 PCGF6Q9BYE7 350 aa37.04■■■■□ 3.52
RRP9-201ENST00000232888 SYNJ2O15056 1496 aa37.02■■■■□ 3.52
RRP9-201ENST00000232888 GRIN2AQ12879 1464 aa37■■■■□ 3.51
RRP9-201ENST00000232888 APLP2Q06481 763 aa36.98■■■■□ 3.51
RRP9-201ENST00000232888 IQGAP2Q13576 1575 aa36.91■■■■□ 3.5
RRP9-201ENST00000232888 CHMP7Q8WUX9 453 aaPredicted RBP36.91■■■■□ 3.5
RRP9-201ENST00000232888 SAMD9Q5K651 1589 aa36.9■■■■□ 3.5
RRP9-201ENST00000232888 KIAA0586Q9BVV6 1533 aa36.89■■■■□ 3.5
RRP9-201ENST00000232888 PPARGC1BQ86YN6 1023 aaKnown RBP36.86■■■■□ 3.49
RRP9-201ENST00000232888 FHOD3Q2V2M9 1422 aa36.8■■■■□ 3.48
RRP9-201ENST00000232888 UGGT2Q9NYU1 1516 aa36.79■■■■□ 3.48
RRP9-201ENST00000232888 FMN1Q68DA7 1419 aa36.79■■■■□ 3.48
RRP9-201ENST00000232888 NUP160Q12769 1436 aa36.77■■■■□ 3.48
RRP9-201ENST00000232888 MAP3K1Q13233 1512 aa36.76■■■■□ 3.47
RRP9-201ENST00000232888 P3H3Q8IVL6 736 aa36.75■■■■□ 3.47
RRP9-201ENST00000232888 FBLN2P98095 1184 aa36.7■■■■□ 3.47
RRP9-201ENST00000232888 CEP170Q5SW79 1584 aa36.7■■■■□ 3.47
RRP9-201ENST00000232888 CASKIN1Q8WXD9 1431 aa36.69■■■■□ 3.46
RRP9-201ENST00000232888 FYCO1Q9BQS8 1478 aa36.68■■■■□ 3.46
RRP9-201ENST00000232888 PCF11O94913 1555 aaKnown RBP36.62■■■■□ 3.45
RRP9-201ENST00000232888 TIAM1Q13009 1591 aa36.57■■■■□ 3.44
RRP9-201ENST00000232888 TTBK1Q5TCY1 1321 aaPredicted RBP36.54■■■■□ 3.44
RRP9-201ENST00000232888 DISP1Q96F81 1524 aa36.53■■■■□ 3.44
RRP9-201ENST00000232888 KIAA0556O60303 1618 aa36.52■■■■□ 3.44
RRP9-201ENST00000232888 KANK4Q5T7N3 995 aaPredicted RBP36.5■■■■□ 3.43
RRP9-201ENST00000232888 CFAP43Q8NDM7 1665 aa36.48■■■■□ 3.43
RRP9-201ENST00000232888 CHD1O14646 1710 aa36.47■■■■□ 3.43
RRP9-201ENST00000232888 JPH4Q96JJ6 628 aa36.47■■■■□ 3.43
RRP9-201ENST00000232888 CARMIL2Q6F5E8 1435 aa36.45■■■■□ 3.43
RRP9-201ENST00000232888 LRRC9Q6ZRR7 1453 aa36.42■■■■□ 3.42
RRP9-201ENST00000232888 ATP1B4Q9UN42 357 aaPredicted RBP36.4■■■■□ 3.42
RRP9-201ENST00000232888 HECW1Q76N89 1606 aa36.34■■■■□ 3.41
RRP9-201ENST00000232888 CCDC18Q5T9S5 1454 aa36.33■■■■□ 3.41
RRP9-201ENST00000232888 SHROOM2Q13796 1616 aa36.22■■■■□ 3.39
RRP9-201ENST00000232888 RRBP1Q9P2E9 1410 aaKnown RBP36.22■■■■□ 3.39
RRP9-201ENST00000232888 PRG4Q92954 1404 aaPredicted RBP36.2■■■■□ 3.39
RRP9-201ENST00000232888 LRRIQ1Q96JM4 1722 aa36.19■■■■□ 3.38
RRP9-201ENST00000232888 EPRSP07814 1512 aaKnown RBP36.18■■■■□ 3.38
RRP9-201ENST00000232888 RAPGEF6Q8TEU7 1601 aa36.17■■■■□ 3.38
RRP9-201ENST00000232888 MTUS2Q5JR59 1369 aa36.16■■■■□ 3.38
RRP9-201ENST00000232888 CLASP1Q7Z460 1538 aa36.16■■■■□ 3.38
RRP9-201ENST00000232888 EHBP1L1Q8N3D4 1523 aa36.11■■■■□ 3.37
RRP9-201ENST00000232888 NUP153P49790 1475 aaKnown RBP36.09■■■■□ 3.37
RRP9-201ENST00000232888 CCNB3Q8WWL7 1395 aa36.08■■■■□ 3.37
RRP9-201ENST00000232888 HRCP23327 699 aa36.07■■■■□ 3.37
RRP9-201ENST00000232888 PHLDB1Q86UU1 1377 aa36.04■■■■□ 3.36
RRP9-201ENST00000232888 PTPRGP23470 1445 aa36.03■■■■□ 3.36
RRP9-201ENST00000232888 ABCA8O94911 1581 aa36.02■■■■□ 3.36
RRP9-201ENST00000232888 PLB1Q6P1J6 1458 aa36.02■■■■□ 3.36
RRP9-201ENST00000232888 CDK13Q14004 1512 aaKnown RBP35.99■■■■□ 3.35
RRP9-201ENST00000232888 SUPT6HQ7KZ85 1726 aaKnown RBP35.98■■■■□ 3.35
RRP9-201ENST00000232888 CDK11AQ9UQ88 783 aaPredicted RBP35.98■■■■□ 3.35
RRP9-201ENST00000232888 MAGI3Q5TCQ9 1506 aa35.95■■■■□ 3.35
RRP9-201ENST00000232888 NCOA2Q15596 1464 aa35.94■■■■□ 3.34
RRP9-201ENST00000232888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.93■■■■□ 3.34
RRP9-201ENST00000232888 ARHGEF11O15085 1522 aa35.93■■■■□ 3.34
RRP9-201ENST00000232888 HNRNPUL2Q1KMD3 747 aaKnown RBP35.91■■■■□ 3.34
RRP9-201ENST00000232888 MYOM3Q5VTT5 1437 aa35.85■■■■□ 3.33
RRP9-201ENST00000232888 FGD6Q6ZV73 1430 aa35.84■■■■□ 3.33
RRP9-201ENST00000232888 UACAQ9BZF9 1416 aa35.83■■■■□ 3.33
RRP9-201ENST00000232888 OSCARQ8IYS5 282 aa35.83■■■■□ 3.33
RRP9-201ENST00000232888 ZEB1P37275 1124 aaPredicted RBP35.82■■■■□ 3.32
RRP9-201ENST00000232888 ERCC6L2Q5T890 1561 aa35.81■■■■□ 3.32
RRP9-201ENST00000232888 ARID3CA6NKF2 412 aa35.81■■■■□ 3.32
RRP9-201ENST00000232888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.81■■■■□ 3.32
RRP9-201ENST00000232888 TROQ12816 1431 aaPredicted RBP35.8■■■■□ 3.32
RRP9-201ENST00000232888 ATP10BO94823 1461 aa35.77■■■■□ 3.32
RRP9-201ENST00000232888 FAM50AQ14320 339 aaKnown RBP35.72■■■■□ 3.31
RRP9-201ENST00000232888 MIA2Q96PC5 1412 aa35.72■■■■□ 3.31
RRP9-201ENST00000232888 ABCC2Q92887 1545 aa35.7■■■■□ 3.31
RRP9-201ENST00000232888 PLEKHD1A6NEE1 506 aa35.69■■■■□ 3.3
RRP9-201ENST00000232888 UHRF1BP1LA0JNW5 1464 aa35.68■■■■□ 3.3
RRP9-201ENST00000232888 ADCY10Q96PN6 1610 aa35.67■■■■□ 3.3
RRP9-201ENST00000232888 CCER1Q8TC90 406 aaPredicted RBP35.64■■■■□ 3.3
RRP9-201ENST00000232888 TCOF1Q13428 1488 aaKnown RBP35.64■■■■□ 3.3
RRP9-201ENST00000232888 PTPN23Q9H3S7 1636 aa35.61■■■■□ 3.29
RRP9-201ENST00000232888 ITGAEP38570 1179 aa35.56■■■■□ 3.28
RRP9-201ENST00000232888 KIF14Q15058 1648 aa35.53■■■■□ 3.28
RRP9-201ENST00000232888 KDM5BQ9UGL1 1544 aa35.5■■■■□ 3.27
RRP9-201ENST00000232888 ITSN2Q9NZM3 1697 aa35.49■■■■□ 3.27
RRP9-201ENST00000232888 ABCC10Q5T3U5 1492 aa35.46■■■■□ 3.27
RRP9-201ENST00000232888 GPATCH8Q9UKJ3 1502 aaKnown RBP35.45■■■■□ 3.27
RRP9-201ENST00000232888 SETD5Q9C0A6 1442 aa35.45■■■■□ 3.27
RRP9-201ENST00000232888 ZCCHC11Q5TAX3 1644 aaKnown RBP35.39■■■■□ 3.26
RRP9-201ENST00000232888 CFDP1Q9UEE9 299 aaPredicted RBP35.38■■■■□ 3.25
RRP9-201ENST00000232888 RAB3GAP2Q9H2M9 1393 aa35.36■■■■□ 3.25
RRP9-201ENST00000232888 PTPRKQ15262 1439 aa35.35■■■■□ 3.25
RRP9-201ENST00000232888 CLSPNQ9HAW4 1339 aa35.33■■■■□ 3.25
RRP9-201ENST00000232888 HFM1A2PYH4 1435 aa35.32■■■■□ 3.24
RRP9-201ENST00000232888 AKNAQ7Z591 1439 aa35.3■■■■□ 3.24
RRP9-201ENST00000232888 CDC42BPAQ5VT25 1732 aa35.29■■■■□ 3.24
RRP9-201ENST00000232888 DHX57Q6P158 1386 aaKnown RBP35.27■■■■□ 3.24
RRP9-201ENST00000232888 CAMSAP2Q08AD1 1489 aa35.27■■■■□ 3.24
RRP9-201ENST00000232888 DNMT1P26358 1616 aaKnown RBP35.26■■■■□ 3.23
RRP9-201ENST00000232888 DAPK1P53355 1430 aa35.25■■■■□ 3.23
RRP9-201ENST00000232888 ZNF644Q9H582 1327 aaPredicted RBP35.21■■■■□ 3.23
RRP9-201ENST00000232888 ABCC5O15440 1437 aa35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms