RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 CCER1Q8TC90 406 aaPredicted RBP19.75■□□□□ 0.75
PLOD3-201ENST00000223127 AQRO60306 1485 aaKnown RBP eCLIP19.75■□□□□ 0.755e-7■■■■■ 28.9
PLOD3-201ENST00000223127 CUL7Q14999 1698 aa19.74■□□□□ 0.75
PLOD3-201ENST00000223127 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
PLOD3-201ENST00000223127 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
PLOD3-201ENST00000223127 DIEXFQ68CQ4 756 aaKnown RBP19.68■□□□□ 0.74
PLOD3-201ENST00000223127 WDR62O43379 1518 aa19.68■□□□□ 0.74
PLOD3-201ENST00000223127 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
PLOD3-201ENST00000223127 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
PLOD3-201ENST00000223127 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
PLOD3-201ENST00000223127 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
PLOD3-201ENST00000223127 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
PLOD3-201ENST00000223127 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
PLOD3-201ENST00000223127 PBRM1Q86U86 1689 aa19.58■□□□□ 0.73
PLOD3-201ENST00000223127 GRIN2BQ13224 1484 aa19.58■□□□□ 0.73
PLOD3-201ENST00000223127 CTTNBP2Q8WZ74 1663 aa19.58■□□□□ 0.72
PLOD3-201ENST00000223127 MYT1Q01538 1121 aa19.58■□□□□ 0.72
PLOD3-201ENST00000223127 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
PLOD3-201ENST00000223127 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
PLOD3-201ENST00000223127 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
PLOD3-201ENST00000223127 EFCAB5A4FU69 1503 aa19.51■□□□□ 0.71
PLOD3-201ENST00000223127 SNAPC4Q5SXM2 1469 aa19.49■□□□□ 0.71
PLOD3-201ENST00000223127 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
PLOD3-201ENST00000223127 PCF11O94913 1555 aaKnown RBP19.49■□□□□ 0.71
PLOD3-201ENST00000223127 FBLN2P98095 1184 aa19.48■□□□□ 0.71
PLOD3-201ENST00000223127 TIAM1Q13009 1591 aa19.45■□□□□ 0.7
PLOD3-201ENST00000223127 FMN1Q68DA7 1419 aa19.43■□□□□ 0.7
PLOD3-201ENST00000223127 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
PLOD3-201ENST00000223127 ITGAEP38570 1179 aa19.41■□□□□ 0.7
PLOD3-201ENST00000223127 CASKIN1Q8WXD9 1431 aa19.41■□□□□ 0.7
PLOD3-201ENST00000223127 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
PLOD3-201ENST00000223127 SAMD9Q5K651 1589 aa19.4■□□□□ 0.7
PLOD3-201ENST00000223127 FYCO1Q9BQS8 1478 aa19.39■□□□□ 0.7
PLOD3-201ENST00000223127 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
PLOD3-201ENST00000223127 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
PLOD3-201ENST00000223127 MAP3K1Q13233 1512 aa19.37■□□□□ 0.69
PLOD3-201ENST00000223127 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
PLOD3-201ENST00000223127 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
PLOD3-201ENST00000223127 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
PLOD3-201ENST00000223127 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
PLOD3-201ENST00000223127 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.69
PLOD3-201ENST00000223127 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
PLOD3-201ENST00000223127 CFAP43Q8NDM7 1665 aa19.31■□□□□ 0.68
PLOD3-201ENST00000223127 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
PLOD3-201ENST00000223127 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
PLOD3-201ENST00000223127 FAM50AQ14320 339 aaKnown RBP19.3■□□□□ 0.68
PLOD3-201ENST00000223127 YTHDC1Q96MU7 727 aaKnown RBP19.29■□□□□ 0.68
PLOD3-201ENST00000223127 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
PLOD3-201ENST00000223127 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
PLOD3-201ENST00000223127 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
PLOD3-201ENST00000223127 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
PLOD3-201ENST00000223127 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
PLOD3-201ENST00000223127 MIER1Q8N108 512 aa19.21■□□□□ 0.67
PLOD3-201ENST00000223127 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
PLOD3-201ENST00000223127 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
PLOD3-201ENST00000223127 NUP160Q12769 1436 aa19.16■□□□□ 0.66
PLOD3-201ENST00000223127 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
PLOD3-201ENST00000223127 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.66
PLOD3-201ENST00000223127 HECW1Q76N89 1606 aa19.14■□□□□ 0.65
PLOD3-201ENST00000223127 NCOA2Q15596 1464 aa19.13■□□□□ 0.65
PLOD3-201ENST00000223127 CCDC18Q5T9S5 1454 aa19.13■□□□□ 0.65
PLOD3-201ENST00000223127 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
PLOD3-201ENST00000223127 FGD6Q6ZV73 1430 aa19.11■□□□□ 0.65
PLOD3-201ENST00000223127 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
PLOD3-201ENST00000223127 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
PLOD3-201ENST00000223127 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
PLOD3-201ENST00000223127 RAB3GAP2Q9H2M9 1393 aa19.08■□□□□ 0.64
PLOD3-201ENST00000223127 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
PLOD3-201ENST00000223127 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
PLOD3-201ENST00000223127 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
PLOD3-201ENST00000223127 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
PLOD3-201ENST00000223127 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
PLOD3-201ENST00000223127 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
PLOD3-201ENST00000223127 PRG4Q92954 1404 aaPredicted RBP19.01■□□□□ 0.63
PLOD3-201ENST00000223127 CHD1O14646 1710 aa19■□□□□ 0.63
PLOD3-201ENST00000223127 CDK11AQ9UQ88 783 aaPredicted RBP18.99■□□□□ 0.63
PLOD3-201ENST00000223127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
PLOD3-201ENST00000223127 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
PLOD3-201ENST00000223127 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
PLOD3-201ENST00000223127 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
PLOD3-201ENST00000223127 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
PLOD3-201ENST00000223127 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
PLOD3-201ENST00000223127 PTPRGP23470 1445 aa18.93■□□□□ 0.62
PLOD3-201ENST00000223127 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
PLOD3-201ENST00000223127 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
PLOD3-201ENST00000223127 TROQ12816 1431 aaPredicted RBP18.88■□□□□ 0.61
PLOD3-201ENST00000223127 PLEKHD1A6NEE1 506 aa18.87■□□□□ 0.61
PLOD3-201ENST00000223127 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
PLOD3-201ENST00000223127 ABCA8O94911 1581 aa18.86■□□□□ 0.61
PLOD3-201ENST00000223127 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
PLOD3-201ENST00000223127 MIA2Q96PC5 1412 aa18.85■□□□□ 0.61
PLOD3-201ENST00000223127 ATP10BO94823 1461 aa18.85■□□□□ 0.61
PLOD3-201ENST00000223127 TCOF1Q13428 1488 aaKnown RBP18.84■□□□□ 0.61
PLOD3-201ENST00000223127 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
PLOD3-201ENST00000223127 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
PLOD3-201ENST00000223127 MAPKBP1O60336 1514 aa18.83■□□□□ 0.61
PLOD3-201ENST00000223127 HFM1A2PYH4 1435 aa18.83■□□□□ 0.61
PLOD3-201ENST00000223127 NAIPQ13075 1403 aa18.82■□□□□ 0.6
PLOD3-201ENST00000223127 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
PLOD3-201ENST00000223127 KIF14Q15058 1648 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms