RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
UPK1A-201ENST00000222275 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
UPK1A-201ENST00000222275 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
UPK1A-201ENST00000222275 CUL7Q14999 1698 aa23.03■■□□□ 1.28
UPK1A-201ENST00000222275 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
UPK1A-201ENST00000222275 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
UPK1A-201ENST00000222275 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
UPK1A-201ENST00000222275 PTPRGP23470 1445 aa22.84■■□□□ 1.25
UPK1A-201ENST00000222275 ADCY10Q96PN6 1610 aa22.82■■□□□ 1.24
UPK1A-201ENST00000222275 DISP1Q96F81 1524 aa22.81■■□□□ 1.24
UPK1A-201ENST00000222275 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
UPK1A-201ENST00000222275 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
UPK1A-201ENST00000222275 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
UPK1A-201ENST00000222275 NPM1P06748 294 aaKnown RBP eCLIP22.77■■□□□ 1.24
UPK1A-201ENST00000222275 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
UPK1A-201ENST00000222275 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
UPK1A-201ENST00000222275 UGGT2Q9NYU1 1516 aa22.73■■□□□ 1.23
UPK1A-201ENST00000222275 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
UPK1A-201ENST00000222275 ABCC10Q5T3U5 1492 aa22.7■■□□□ 1.22
UPK1A-201ENST00000222275 KIF13AQ9H1H9 1805 aa22.7■■□□□ 1.22
UPK1A-201ENST00000222275 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
UPK1A-201ENST00000222275 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
UPK1A-201ENST00000222275 EEA1Q15075 1411 aa22.65■■□□□ 1.22
UPK1A-201ENST00000222275 UACAQ9BZF9 1416 aa22.65■■□□□ 1.22
UPK1A-201ENST00000222275 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
UPK1A-201ENST00000222275 UHRF1BP1LA0JNW5 1464 aa22.61■■□□□ 1.21
UPK1A-201ENST00000222275 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
UPK1A-201ENST00000222275 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
UPK1A-201ENST00000222275 P3H3Q8IVL6 736 aa22.58■■□□□ 1.21
UPK1A-201ENST00000222275 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
UPK1A-201ENST00000222275 PLB1Q6P1J6 1458 aa22.55■■□□□ 1.2
UPK1A-201ENST00000222275 CTTNBP2Q8WZ74 1663 aa22.54■■□□□ 1.2
UPK1A-201ENST00000222275 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
UPK1A-201ENST00000222275 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
UPK1A-201ENST00000222275 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
UPK1A-201ENST00000222275 ABCA8O94911 1581 aa22.45■■□□□ 1.18
UPK1A-201ENST00000222275 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
UPK1A-201ENST00000222275 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
UPK1A-201ENST00000222275 ZCCHC11Q5TAX3 1644 aaKnown RBP22.43■■□□□ 1.18
UPK1A-201ENST00000222275 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
UPK1A-201ENST00000222275 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
UPK1A-201ENST00000222275 GLI2P10070 1586 aa22.4■■□□□ 1.18
UPK1A-201ENST00000222275 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
UPK1A-201ENST00000222275 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
UPK1A-201ENST00000222275 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
UPK1A-201ENST00000222275 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
UPK1A-201ENST00000222275 ATP10BO94823 1461 aa22.34■■□□□ 1.17
UPK1A-201ENST00000222275 WDR7Q9Y4E6 1490 aa22.34■■□□□ 1.17
UPK1A-201ENST00000222275 FHOD3Q2V2M9 1422 aa22.31■■□□□ 1.16
UPK1A-201ENST00000222275 KIF21BO75037 1637 aa22.31■■□□□ 1.16
UPK1A-201ENST00000222275 KDM6BO15054 1643 aa22.28■■□□□ 1.16
UPK1A-201ENST00000222275 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
UPK1A-201ENST00000222275 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
UPK1A-201ENST00000222275 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
UPK1A-201ENST00000222275 KDM4FA0A1W2PPD8 638 aa22.23■■□□□ 1.15
UPK1A-201ENST00000222275 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
UPK1A-201ENST00000222275 NUP153P49790 1475 aaKnown RBP22.22■■□□□ 1.15
UPK1A-201ENST00000222275 RAPGEF6Q8TEU7 1601 aa22.18■■□□□ 1.14
UPK1A-201ENST00000222275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
UPK1A-201ENST00000222275 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
UPK1A-201ENST00000222275 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
UPK1A-201ENST00000222275 TEX14Q8IWB6 1497 aa22.13■■□□□ 1.13
UPK1A-201ENST00000222275 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
UPK1A-201ENST00000222275 EFCAB5A4FU69 1503 aa22.1■■□□□ 1.13
UPK1A-201ENST00000222275 CFAP43Q8NDM7 1665 aa22.07■■□□□ 1.12
UPK1A-201ENST00000222275 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
UPK1A-201ENST00000222275 CDK13Q14004 1512 aaKnown RBP22.03■■□□□ 1.12
UPK1A-201ENST00000222275 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
UPK1A-201ENST00000222275 ABCA9Q8IUA7 1624 aa22.02■■□□□ 1.12
UPK1A-201ENST00000222275 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
UPK1A-201ENST00000222275 ARAP3Q8WWN8 1544 aa21.98■■□□□ 1.11
UPK1A-201ENST00000222275 FMN1Q68DA7 1419 aa21.96■■□□□ 1.11
UPK1A-201ENST00000222275 ADGRL1O94910 1474 aa21.93■■□□□ 1.1
UPK1A-201ENST00000222275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.93■■□□□ 1.1
UPK1A-201ENST00000222275 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
UPK1A-201ENST00000222275 NEO1Q92859 1461 aa21.9■■□□□ 1.1
UPK1A-201ENST00000222275 LOC105371045A0A1W2PR82 267 aa21.88■■□□□ 1.09
UPK1A-201ENST00000222275 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
UPK1A-201ENST00000222275 AKNAQ7Z591 1439 aa21.86■■□□□ 1.09
UPK1A-201ENST00000222275 LRRIQ1Q96JM4 1722 aa21.83■■□□□ 1.09
UPK1A-201ENST00000222275 FANCAO15360 1455 aa21.83■■□□□ 1.08
UPK1A-201ENST00000222275 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
UPK1A-201ENST00000222275 PLCH2O75038 1416 aa21.82■■□□□ 1.08
UPK1A-201ENST00000222275 CLIP1P30622 1438 aa21.82■■□□□ 1.08
UPK1A-201ENST00000222275 CASKIN1Q8WXD9 1431 aa21.82■■□□□ 1.08
UPK1A-201ENST00000222275 HECW1Q76N89 1606 aa21.82■■□□□ 1.08
UPK1A-201ENST00000222275 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
UPK1A-201ENST00000222275 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
UPK1A-201ENST00000222275 KIF14Q15058 1648 aa21.78■■□□□ 1.08
UPK1A-201ENST00000222275 DENND4BO75064 1496 aaPredicted RBP21.77■■□□□ 1.08
UPK1A-201ENST00000222275 CEP162Q5TB80 1403 aa21.77■■□□□ 1.08
UPK1A-201ENST00000222275 PCF11O94913 1555 aaKnown RBP21.76■■□□□ 1.07
UPK1A-201ENST00000222275 SCAPERQ9BY12 1400 aa21.74■■□□□ 1.07
UPK1A-201ENST00000222275 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
UPK1A-201ENST00000222275 YEATS2Q9ULM3 1422 aa21.72■■□□□ 1.07
UPK1A-201ENST00000222275 RICTORQ6R327 1708 aa21.71■■□□□ 1.07
UPK1A-201ENST00000222275 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
UPK1A-201ENST00000222275 FYCO1Q9BQS8 1478 aa21.66■■□□□ 1.06
UPK1A-201ENST00000222275 ARID4BQ4LE39 1312 aaPredicted RBP21.66■■□□□ 1.06
UPK1A-201ENST00000222275 CCDC18Q5T9S5 1454 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms