RNA–Protein interactions for RNA: ENST00000220659.10

BRF2-201, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF2, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-201ENST00000220659 MAP3K1Q13233 1512 aa19.22■□□□□ 0.67
BRF2-201ENST00000220659 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
BRF2-201ENST00000220659 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
BRF2-201ENST00000220659 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.666e-9■■■□□ 18
BRF2-201ENST00000220659 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
BRF2-201ENST00000220659 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
BRF2-201ENST00000220659 KANK4Q5T7N3 995 aaPredicted RBP19.16■□□□□ 0.66
BRF2-201ENST00000220659 TIAM1Q13009 1591 aa19.13■□□□□ 0.65
BRF2-201ENST00000220659 SAMD9Q5K651 1589 aa19.13■□□□□ 0.65
BRF2-201ENST00000220659 ZNF608Q9ULD9 1512 aaPredicted RBP19.12■□□□□ 0.65
BRF2-201ENST00000220659 FHOD3Q2V2M9 1422 aa19.11■□□□□ 0.65
BRF2-201ENST00000220659 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
BRF2-201ENST00000220659 PCF11O94913 1555 aaKnown RBP19.09■□□□□ 0.65
BRF2-201ENST00000220659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.65
BRF2-201ENST00000220659 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.65
BRF2-201ENST00000220659 RRBP1Q9P2E9 1410 aaKnown RBP19.07■□□□□ 0.64
BRF2-201ENST00000220659 CFAP43Q8NDM7 1665 aa19.07■□□□□ 0.64
BRF2-201ENST00000220659 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
BRF2-201ENST00000220659 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
BRF2-201ENST00000220659 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
BRF2-201ENST00000220659 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
BRF2-201ENST00000220659 LRRC9Q6ZRR7 1453 aa19.04■□□□□ 0.64
BRF2-201ENST00000220659 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
BRF2-201ENST00000220659 IQGAP2Q13576 1575 aa19.01■□□□□ 0.63
BRF2-201ENST00000220659 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
BRF2-201ENST00000220659 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
BRF2-201ENST00000220659 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
BRF2-201ENST00000220659 UGGT2Q9NYU1 1516 aa18.96■□□□□ 0.63
BRF2-201ENST00000220659 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
BRF2-201ENST00000220659 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
BRF2-201ENST00000220659 SYNJ2O15056 1496 aa18.91■□□□□ 0.62
BRF2-201ENST00000220659 ATP1B4Q9UN42 357 aaPredicted RBP18.9■□□□□ 0.62
BRF2-201ENST00000220659 PHLDB1Q86UU1 1377 aa18.88■□□□□ 0.61
BRF2-201ENST00000220659 LRRIQ1Q96JM4 1722 aa18.87■□□□□ 0.61
BRF2-201ENST00000220659 FBLN2P98095 1184 aa18.83■□□□□ 0.61
BRF2-201ENST00000220659 CCDC18Q5T9S5 1454 aa18.83■□□□□ 0.61
BRF2-201ENST00000220659 DISP1Q96F81 1524 aa18.83■□□□□ 0.6
BRF2-201ENST00000220659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.82■□□□□ 0.6
BRF2-201ENST00000220659 KIAA0556O60303 1618 aa18.82■□□□□ 0.6
BRF2-201ENST00000220659 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
BRF2-201ENST00000220659 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
BRF2-201ENST00000220659 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
BRF2-201ENST00000220659 NUP160Q12769 1436 aa18.81■□□□□ 0.6
BRF2-201ENST00000220659 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
BRF2-201ENST00000220659 EHBP1L1Q8N3D4 1523 aa18.78■□□□□ 0.6
BRF2-201ENST00000220659 CLSPNQ9HAW4 1339 aa18.76■□□□□ 0.59
BRF2-201ENST00000220659 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
BRF2-201ENST00000220659 SUPT6HQ7KZ85 1726 aaKnown RBP18.74■□□□□ 0.59
BRF2-201ENST00000220659 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
BRF2-201ENST00000220659 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
BRF2-201ENST00000220659 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
BRF2-201ENST00000220659 NCOA2Q15596 1464 aa18.73■□□□□ 0.59
BRF2-201ENST00000220659 MAGI3Q5TCQ9 1506 aa18.72■□□□□ 0.59
BRF2-201ENST00000220659 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
BRF2-201ENST00000220659 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
BRF2-201ENST00000220659 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
BRF2-201ENST00000220659 RAPGEF6Q8TEU7 1601 aa18.67■□□□□ 0.58
BRF2-201ENST00000220659 ITGAEP38570 1179 aa18.67■□□□□ 0.58
BRF2-201ENST00000220659 JPH4Q96JJ6 628 aa18.67■□□□□ 0.58
BRF2-201ENST00000220659 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
BRF2-201ENST00000220659 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
BRF2-201ENST00000220659 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
BRF2-201ENST00000220659 NUP153P49790 1475 aaKnown RBP18.65■□□□□ 0.58
BRF2-201ENST00000220659 RAB3GAP2Q9H2M9 1393 aa18.65■□□□□ 0.58
BRF2-201ENST00000220659 TCOF1Q13428 1488 aaKnown RBP18.6■□□□□ 0.57
BRF2-201ENST00000220659 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
BRF2-201ENST00000220659 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
BRF2-201ENST00000220659 CHD1O14646 1710 aa18.57■□□□□ 0.56
BRF2-201ENST00000220659 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
BRF2-201ENST00000220659 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
BRF2-201ENST00000220659 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
BRF2-201ENST00000220659 ABCA8O94911 1581 aa18.54■□□□□ 0.56
BRF2-201ENST00000220659 HFM1A2PYH4 1435 aa18.52■□□□□ 0.56
BRF2-201ENST00000220659 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
BRF2-201ENST00000220659 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
BRF2-201ENST00000220659 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
BRF2-201ENST00000220659 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
BRF2-201ENST00000220659 ADCY10Q96PN6 1610 aa18.48■□□□□ 0.55
BRF2-201ENST00000220659 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
BRF2-201ENST00000220659 NAIPQ13075 1403 aa18.46■□□□□ 0.55
BRF2-201ENST00000220659 AKNAQ7Z591 1439 aa18.46■□□□□ 0.55
BRF2-201ENST00000220659 PTPRGP23470 1445 aa18.44■□□□□ 0.54
BRF2-201ENST00000220659 ATP10BO94823 1461 aa18.42■□□□□ 0.54
BRF2-201ENST00000220659 GCC2Q8IWJ2 1684 aa18.39■□□□□ 0.54
BRF2-201ENST00000220659 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
BRF2-201ENST00000220659 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
BRF2-201ENST00000220659 ITSN2Q9NZM3 1697 aa18.39■□□□□ 0.53
BRF2-201ENST00000220659 KIF14Q15058 1648 aa18.38■□□□□ 0.53
BRF2-201ENST00000220659 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
BRF2-201ENST00000220659 DNMT1P26358 1616 aaKnown RBP18.37■□□□□ 0.53
BRF2-201ENST00000220659 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
BRF2-201ENST00000220659 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
BRF2-201ENST00000220659 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
BRF2-201ENST00000220659 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
BRF2-201ENST00000220659 DAPK1P53355 1430 aa18.36■□□□□ 0.53
BRF2-201ENST00000220659 ABCC5O15440 1437 aa18.34■□□□□ 0.53
BRF2-201ENST00000220659 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
BRF2-201ENST00000220659 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
BRF2-201ENST00000220659 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
BRF2-201ENST00000220659 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms