RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TIMELESSQ9UNS1 1208 aa14.63□□□□□ -0.07
USP31-201ENST00000219689 GOLGA6L22H0YM25 854 aa14.63□□□□□ -0.07
USP31-201ENST00000219689 HSP90AA2PQ14568 343 aaPredicted RBP14.63□□□□□ -0.07
USP31-201ENST00000219689 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
USP31-201ENST00000219689 MSNP26038 577 aaKnown RBP14.6□□□□□ -0.07
USP31-201ENST00000219689 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
USP31-201ENST00000219689 PKNOX2Q96KN3 472 aa14.57□□□□□ -0.08
USP31-201ENST00000219689 PODXL2Q9NZ53 605 aa14.57□□□□□ -0.08
USP31-201ENST00000219689 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
USP31-201ENST00000219689 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
USP31-201ENST00000219689 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
USP31-201ENST00000219689 B4GALNT3Q6L9W6 998 aa14.56□□□□□ -0.08
USP31-201ENST00000219689 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
USP31-201ENST00000219689 RSPH6AQ9H0K4 717 aa14.55□□□□□ -0.08
USP31-201ENST00000219689 MYO15BQ96JP2 1530 aa14.55□□□□□ -0.08
USP31-201ENST00000219689 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
USP31-201ENST00000219689 PNNQ9H307 717 aaKnown RBP14.55□□□□□ -0.08
USP31-201ENST00000219689 TNNT3P45378 269 aaPredicted RBP14.54□□□□□ -0.08
USP31-201ENST00000219689 PPP4R2Q9NY27 417 aa14.54□□□□□ -0.08
USP31-201ENST00000219689 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.08
USP31-201ENST00000219689 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
USP31-201ENST00000219689 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
USP31-201ENST00000219689 PLCB2Q00722 1185 aa14.48□□□□□ -0.09
USP31-201ENST00000219689 SPRYD3Q8NCJ5 442 aa14.45□□□□□ -0.1
USP31-201ENST00000219689 GZF1Q9H116 711 aaPredicted RBP14.43□□□□□ -0.1
USP31-201ENST00000219689 HSP90AB1P08238 724 aaKnown RBP14.42□□□□□ -0.1
USP31-201ENST00000219689 RGS3P49796 1198 aa14.4□□□□□ -0.1
USP31-201ENST00000219689 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
USP31-201ENST00000219689 ZRSR1Q15695 479 aaKnown RBP14.38□□□□□ -0.11
USP31-201ENST00000219689 WDR43Q15061 677 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP31-201ENST00000219689 KAT6BQ8WYB5 2073 aa14.34□□□□□ -0.11
USP31-201ENST00000219689 DRC7Q8IY82 874 aa14.33□□□□□ -0.12
USP31-201ENST00000219689 GOLGA6L6A8MZA4 724 aa14.32□□□□□ -0.12
USP31-201ENST00000219689 IPO9Q96P70 1041 aaKnown RBP14.3□□□□□ -0.12
USP31-201ENST00000219689 HSCBQ8IWL3 235 aa14.29□□□□□ -0.12
USP31-201ENST00000219689 GOLGA6L3A6NEY3 463 aa14.29□□□□□ -0.12
USP31-201ENST00000219689 ZNF771Q7L3S4 317 aaPredicted RBP14.26□□□□□ -0.13
USP31-201ENST00000219689 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
USP31-201ENST00000219689 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
USP31-201ENST00000219689 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
USP31-201ENST00000219689 NRDCO43847 1150 aa14.23□□□□□ -0.13
USP31-201ENST00000219689 APPP05067 770 aa14.22□□□□□ -0.13
USP31-201ENST00000219689 PTMSP20962 102 aa14.21□□□□□ -0.13
USP31-201ENST00000219689 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
USP31-201ENST00000219689 CALRP27797 417 aaKnown RBP14.19□□□□□ -0.14
USP31-201ENST00000219689 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
USP31-201ENST00000219689 GSE1Q14687 1217 aa14.18□□□□□ -0.14
USP31-201ENST00000219689 FAM13BQ9NYF5 915 aa14.17□□□□□ -0.14
USP31-201ENST00000219689 GBP4Q96PP9 640 aa14.17□□□□□ -0.14
USP31-201ENST00000219689 GON4LQ3T8J9 2241 aa14.17□□□□□ -0.14
USP31-201ENST00000219689 IL27Q8NEV9 243 aa14.15□□□□□ -0.15
USP31-201ENST00000219689 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.156e-6■■■■□ 25.1
USP31-201ENST00000219689 ARID3CA6NKF2 412 aa14.14□□□□□ -0.15
USP31-201ENST00000219689 SETQ01105 290 aaPredicted RBP14.14□□□□□ -0.15
USP31-201ENST00000219689 USP35Q9P2H5 1018 aa14.13□□□□□ -0.15
USP31-201ENST00000219689 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
USP31-201ENST00000219689 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
USP31-201ENST00000219689 GOLGA6L1Q8N7Z2 621 aa14.11□□□□□ -0.15
USP31-201ENST00000219689 TULP1O00294 542 aaPredicted RBP14.09□□□□□ -0.15
USP31-201ENST00000219689 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
USP31-201ENST00000219689 GOLGA6L4A6NEF3 574 aa14.08□□□□□ -0.16
USP31-201ENST00000219689 TCERG1O14776 1098 aaKnown RBP14.07□□□□□ -0.16
USP31-201ENST00000219689 FRAT1Q92837 279 aaPredicted RBP14.07□□□□□ -0.16
USP31-201ENST00000219689 BRPF3Q9ULD4 1205 aa14.05□□□□□ -0.16
USP31-201ENST00000219689 ZNF777Q9ULD5 760 aaPredicted RBP14.05□□□□□ -0.16
USP31-201ENST00000219689 SLC4A3P48751 1232 aa14.03□□□□□ -0.16
USP31-201ENST00000219689 NOC3LQ8WTT2 800 aaKnown RBP14.03□□□□□ -0.16
USP31-201ENST00000219689 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.16
USP31-201ENST00000219689 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.17
USP31-201ENST00000219689 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
USP31-201ENST00000219689 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
USP31-201ENST00000219689 NAP1L2Q9ULW6 460 aaPredicted RBP14□□□□□ -0.17
USP31-201ENST00000219689 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
USP31-201ENST00000219689 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
USP31-201ENST00000219689 CCER2I3L3R5 266 aa13.98□□□□□ -0.17
USP31-201ENST00000219689 CALD1Q05682 793 aaKnown RBP13.97□□□□□ -0.17
USP31-201ENST00000219689 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
USP31-201ENST00000219689 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.17
USP31-201ENST00000219689 PATL2C9JE40 543 aaKnown RBP13.96□□□□□ -0.18
USP31-201ENST00000219689 PDE4CQ08493 712 aa13.95□□□□□ -0.18
USP31-201ENST00000219689 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
USP31-201ENST00000219689 FGD1P98174 961 aa13.95□□□□□ -0.18
USP31-201ENST00000219689 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
USP31-201ENST00000219689 KCNJ4P48050 445 aa13.93□□□□□ -0.18
USP31-201ENST00000219689 TEX35Q5T0J7 233 aa13.93□□□□□ -0.18
USP31-201ENST00000219689 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
USP31-201ENST00000219689 PHF14O94880 888 aa13.92□□□□□ -0.18
USP31-201ENST00000219689 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
USP31-201ENST00000219689 TPM2P07951 284 aa13.92□□□□□ -0.18
USP31-201ENST00000219689 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
USP31-201ENST00000219689 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
USP31-201ENST00000219689 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
USP31-201ENST00000219689 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
USP31-201ENST00000219689 ZNF592Q92610 1267 aa13.91□□□□□ -0.18
USP31-201ENST00000219689 MCCP23508 829 aa13.91□□□□□ -0.18
USP31-201ENST00000219689 R3HCC1Q9Y3T6 440 aaKnown RBP13.91□□□□□ -0.18
USP31-201ENST00000219689 NOM1Q5C9Z4 860 aaKnown RBP13.91□□□□□ -0.18
USP31-201ENST00000219689 CC2D1BQ5T0F9 858 aaKnown RBP13.9□□□□□ -0.18
USP31-201ENST00000219689 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
USP31-201ENST00000219689 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms