RNA–Protein interactions for RNA: ENST00000216489.7

ALKBH1-201, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH1, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-201ENST00000216489 WDR62O43379 1518 aa20.69■□□□□ 0.9
ALKBH1-201ENST00000216489 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
ALKBH1-201ENST00000216489 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
ALKBH1-201ENST00000216489 FHOD3Q2V2M9 1422 aa20.66■□□□□ 0.9
ALKBH1-201ENST00000216489 ERCC6Q03468 1493 aa20.66■□□□□ 0.9
ALKBH1-201ENST00000216489 PCF11O94913 1555 aaKnown RBP20.63■□□□□ 0.89
ALKBH1-201ENST00000216489 EFCAB5A4FU69 1503 aa20.63■□□□□ 0.89
ALKBH1-201ENST00000216489 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
ALKBH1-201ENST00000216489 TIAM1Q13009 1591 aa20.61■□□□□ 0.89
ALKBH1-201ENST00000216489 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
ALKBH1-201ENST00000216489 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
ALKBH1-201ENST00000216489 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
ALKBH1-201ENST00000216489 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
ALKBH1-201ENST00000216489 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
ALKBH1-201ENST00000216489 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
ALKBH1-201ENST00000216489 MAP3K1Q13233 1512 aa20.54■□□□□ 0.88
ALKBH1-201ENST00000216489 CFAP43Q8NDM7 1665 aa20.54■□□□□ 0.88
ALKBH1-201ENST00000216489 SAMD9Q5K651 1589 aa20.53■□□□□ 0.88
ALKBH1-201ENST00000216489 RRBP1Q9P2E9 1410 aaKnown RBP20.51■□□□□ 0.87
ALKBH1-201ENST00000216489 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
ALKBH1-201ENST00000216489 LRRC9Q6ZRR7 1453 aa20.51■□□□□ 0.87
ALKBH1-201ENST00000216489 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
ALKBH1-201ENST00000216489 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
ALKBH1-201ENST00000216489 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
ALKBH1-201ENST00000216489 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
ALKBH1-201ENST00000216489 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
ALKBH1-201ENST00000216489 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
ALKBH1-201ENST00000216489 PHLDB1Q86UU1 1377 aa20.4■□□□□ 0.86
ALKBH1-201ENST00000216489 LRRIQ1Q96JM4 1722 aa20.4■□□□□ 0.86
ALKBH1-201ENST00000216489 ITGAEP38570 1179 aa20.37■□□□□ 0.85
ALKBH1-201ENST00000216489 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
ALKBH1-201ENST00000216489 MAGI1Q96QZ7 1491 aaPredicted RBP20.31■□□□□ 0.84
ALKBH1-201ENST00000216489 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
ALKBH1-201ENST00000216489 KIAA0586Q9BVV6 1533 aa20.29■□□□□ 0.84
ALKBH1-201ENST00000216489 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
ALKBH1-201ENST00000216489 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
ALKBH1-201ENST00000216489 SYNJ2O15056 1496 aa20.27■□□□□ 0.83
ALKBH1-201ENST00000216489 FBLN2P98095 1184 aa20.26■□□□□ 0.83
ALKBH1-201ENST00000216489 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
ALKBH1-201ENST00000216489 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
ALKBH1-201ENST00000216489 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
ALKBH1-201ENST00000216489 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
ALKBH1-201ENST00000216489 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
ALKBH1-201ENST00000216489 DISP1Q96F81 1524 aa20.23■□□□□ 0.83
ALKBH1-201ENST00000216489 MAGI3Q5TCQ9 1506 aa20.21■□□□□ 0.83
ALKBH1-201ENST00000216489 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
ALKBH1-201ENST00000216489 CCDC18Q5T9S5 1454 aa20.2■□□□□ 0.82
ALKBH1-201ENST00000216489 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
ALKBH1-201ENST00000216489 NCOA2Q15596 1464 aa20.19■□□□□ 0.82
ALKBH1-201ENST00000216489 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
ALKBH1-201ENST00000216489 SUPT6HQ7KZ85 1726 aaKnown RBP20.18■□□□□ 0.82
ALKBH1-201ENST00000216489 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
ALKBH1-201ENST00000216489 EPRSP07814 1512 aaKnown RBP20.18■□□□□ 0.82
ALKBH1-201ENST00000216489 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
ALKBH1-201ENST00000216489 NUP160Q12769 1436 aa20.14■□□□□ 0.81
ALKBH1-201ENST00000216489 MYOM3Q5VTT5 1437 aa20.11■□□□□ 0.81
ALKBH1-201ENST00000216489 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
ALKBH1-201ENST00000216489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.1■□□□□ 0.81
ALKBH1-201ENST00000216489 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
ALKBH1-201ENST00000216489 RAPGEF6Q8TEU7 1601 aa20.09■□□□□ 0.81
ALKBH1-201ENST00000216489 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.81
ALKBH1-201ENST00000216489 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
ALKBH1-201ENST00000216489 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
ALKBH1-201ENST00000216489 PTPN23Q9H3S7 1636 aa20.05■□□□□ 0.8
ALKBH1-201ENST00000216489 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
ALKBH1-201ENST00000216489 PLB1Q6P1J6 1458 aa20.02■□□□□ 0.8
ALKBH1-201ENST00000216489 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.79
ALKBH1-201ENST00000216489 CHD1O14646 1710 aa20.01■□□□□ 0.79
ALKBH1-201ENST00000216489 MAPKBP1O60336 1514 aa20.01■□□□□ 0.79
ALKBH1-201ENST00000216489 ZNF316A6NFI3 1004 aaPredicted RBP19.99■□□□□ 0.79
ALKBH1-201ENST00000216489 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
ALKBH1-201ENST00000216489 TCOF1Q13428 1488 aaKnown RBP19.95■□□□□ 0.78
ALKBH1-201ENST00000216489 HFM1A2PYH4 1435 aa19.92■□□□□ 0.78
ALKBH1-201ENST00000216489 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
ALKBH1-201ENST00000216489 MIA2Q96PC5 1412 aa19.9■□□□□ 0.78
ALKBH1-201ENST00000216489 ABCA8O94911 1581 aa19.89■□□□□ 0.78
ALKBH1-201ENST00000216489 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
ALKBH1-201ENST00000216489 NAIPQ13075 1403 aa19.89■□□□□ 0.77
ALKBH1-201ENST00000216489 TROQ12816 1431 aaPredicted RBP19.88■□□□□ 0.77
ALKBH1-201ENST00000216489 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
ALKBH1-201ENST00000216489 KIF14Q15058 1648 aa19.86■□□□□ 0.77
ALKBH1-201ENST00000216489 RRP7BPQ9NSQ0 103 aa19.85■□□□□ 0.77
ALKBH1-201ENST00000216489 SIN3AQ96ST3 1273 aa19.84■□□□□ 0.77
ALKBH1-201ENST00000216489 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.76
ALKBH1-201ENST00000216489 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
ALKBH1-201ENST00000216489 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
ALKBH1-201ENST00000216489 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
ALKBH1-201ENST00000216489 PTPRGP23470 1445 aa19.81■□□□□ 0.76
ALKBH1-201ENST00000216489 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
ALKBH1-201ENST00000216489 ATP10BO94823 1461 aa19.8■□□□□ 0.76
ALKBH1-201ENST00000216489 UACAQ9BZF9 1416 aa19.79■□□□□ 0.76
ALKBH1-201ENST00000216489 KDM6BO15054 1643 aa19.79■□□□□ 0.76
ALKBH1-201ENST00000216489 ERCC6L2Q5T890 1561 aa19.78■□□□□ 0.76
ALKBH1-201ENST00000216489 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
ALKBH1-201ENST00000216489 DAPK1P53355 1430 aa19.78■□□□□ 0.76
ALKBH1-201ENST00000216489 DNMT1P26358 1616 aaKnown RBP19.77■□□□□ 0.76
ALKBH1-201ENST00000216489 GPATCH8Q9UKJ3 1502 aaKnown RBP19.76■□□□□ 0.75
ALKBH1-201ENST00000216489 ABCC5O15440 1437 aa19.75■□□□□ 0.75
ALKBH1-201ENST00000216489 AKNAQ7Z591 1439 aa19.75■□□□□ 0.75
ALKBH1-201ENST00000216489 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms