RNA–Protein interactions for RNA: ENST00000215071.8

PSMD8-201, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD8, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-201ENST00000215071 RANGAP1P46060 587 aaPredicted RBP30.81■■■□□ 2.52
PSMD8-201ENST00000215071 EFCAB5A4FU69 1503 aa30.81■■■□□ 2.52
PSMD8-201ENST00000215071 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
PSMD8-201ENST00000215071 PCGF6Q9BYE7 350 aa30.79■■■□□ 2.52
PSMD8-201ENST00000215071 SYNJ2O15056 1496 aa30.7■■■□□ 2.5
PSMD8-201ENST00000215071 GRIN2AQ12879 1464 aa30.68■■■□□ 2.5
PSMD8-201ENST00000215071 SAMD9Q5K651 1589 aa30.68■■■□□ 2.5
PSMD8-201ENST00000215071 IQGAP2Q13576 1575 aa30.64■■■□□ 2.49
PSMD8-201ENST00000215071 KIAA0586Q9BVV6 1533 aa30.61■■■□□ 2.49
PSMD8-201ENST00000215071 PPARGC1BQ86YN6 1023 aaKnown RBP30.59■■■□□ 2.49
PSMD8-201ENST00000215071 APLP2Q06481 763 aa30.58■■■□□ 2.49
PSMD8-201ENST00000215071 MAP3K1Q13233 1512 aa30.57■■■□□ 2.48
PSMD8-201ENST00000215071 UGGT2Q9NYU1 1516 aa30.55■■■□□ 2.48
PSMD8-201ENST00000215071 CHMP7Q8WUX9 453 aaPredicted RBP30.53■■■□□ 2.48
PSMD8-201ENST00000215071 FHOD3Q2V2M9 1422 aa30.52■■■□□ 2.48
PSMD8-201ENST00000215071 NUP160Q12769 1436 aa30.51■■■□□ 2.47
PSMD8-201ENST00000215071 FMN1Q68DA7 1419 aa30.51■■■□□ 2.47
PSMD8-201ENST00000215071 CEP170Q5SW79 1584 aa30.48■■■□□ 2.47
PSMD8-201ENST00000215071 CASKIN1Q8WXD9 1431 aa30.46■■■□□ 2.47
PSMD8-201ENST00000215071 FYCO1Q9BQS8 1478 aa30.45■■■□□ 2.47
PSMD8-201ENST00000215071 P3H3Q8IVL6 736 aa30.45■■■□□ 2.46
PSMD8-201ENST00000215071 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
PSMD8-201ENST00000215071 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
PSMD8-201ENST00000215071 CFAP43Q8NDM7 1665 aa30.35■■■□□ 2.45
PSMD8-201ENST00000215071 DISP1Q96F81 1524 aa30.34■■■□□ 2.45
PSMD8-201ENST00000215071 FBLN2P98095 1184 aa30.33■■■□□ 2.45
PSMD8-201ENST00000215071 KIAA0556O60303 1618 aa30.33■■■□□ 2.45
PSMD8-201ENST00000215071 KANK4Q5T7N3 995 aaPredicted RBP30.32■■■□□ 2.45
PSMD8-201ENST00000215071 CHD1O14646 1710 aa30.3■■■□□ 2.44
PSMD8-201ENST00000215071 TTBK1Q5TCY1 1321 aaPredicted RBP30.28■■■□□ 2.44
PSMD8-201ENST00000215071 LRRC9Q6ZRR7 1453 aa30.26■■■□□ 2.43
PSMD8-201ENST00000215071 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
PSMD8-201ENST00000215071 LRRIQ1Q96JM4 1722 aa30.19■■■□□ 2.42
PSMD8-201ENST00000215071 CARMIL2Q6F5E8 1435 aa30.17■■■□□ 2.42
PSMD8-201ENST00000215071 HECW1Q76N89 1606 aa30.16■■■□□ 2.42
PSMD8-201ENST00000215071 CCDC18Q5T9S5 1454 aa30.14■■■□□ 2.42
PSMD8-201ENST00000215071 RRBP1Q9P2E9 1410 aaKnown RBP30.12■■■□□ 2.41
PSMD8-201ENST00000215071 SHROOM2Q13796 1616 aa30.11■■■□□ 2.41
PSMD8-201ENST00000215071 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
PSMD8-201ENST00000215071 EPRSP07814 1512 aaKnown RBP30.04■■■□□ 2.4
PSMD8-201ENST00000215071 RAPGEF6Q8TEU7 1601 aa30.04■■■□□ 2.4
PSMD8-201ENST00000215071 HRCP23327 699 aa30.04■■■□□ 2.4
PSMD8-201ENST00000215071 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.39
PSMD8-201ENST00000215071 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
PSMD8-201ENST00000215071 EHBP1L1Q8N3D4 1523 aa29.98■■■□□ 2.39
PSMD8-201ENST00000215071 NUP153P49790 1475 aaKnown RBP29.96■■■□□ 2.39
PSMD8-201ENST00000215071 MTUS2Q5JR59 1369 aa29.96■■■□□ 2.39
PSMD8-201ENST00000215071 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.39
PSMD8-201ENST00000215071 PHLDB1Q86UU1 1377 aa29.94■■■□□ 2.38
PSMD8-201ENST00000215071 ABCA8O94911 1581 aa29.92■■■□□ 2.38
PSMD8-201ENST00000215071 MAGI3Q5TCQ9 1506 aa29.91■■■□□ 2.38
PSMD8-201ENST00000215071 SUPT6HQ7KZ85 1726 aaKnown RBP29.91■■■□□ 2.38
PSMD8-201ENST00000215071 ARHGEF11O15085 1522 aa29.89■■■□□ 2.38
PSMD8-201ENST00000215071 PLB1Q6P1J6 1458 aa29.89■■■□□ 2.37
PSMD8-201ENST00000215071 CDK13Q14004 1512 aaKnown RBP29.88■■■□□ 2.37
PSMD8-201ENST00000215071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.86■■■□□ 2.376e-13■■■■□ 24.7
PSMD8-201ENST00000215071 NCOA2Q15596 1464 aa29.84■■■□□ 2.37
PSMD8-201ENST00000215071 PTPRGP23470 1445 aa29.83■■■□□ 2.37
PSMD8-201ENST00000215071 HNRNPUL2Q1KMD3 747 aaKnown RBP29.77■■■□□ 2.36
PSMD8-201ENST00000215071 CDK11AQ9UQ88 783 aaPredicted RBP29.77■■■□□ 2.36
PSMD8-201ENST00000215071 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
PSMD8-201ENST00000215071 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
PSMD8-201ENST00000215071 ERCC6L2Q5T890 1561 aa29.75■■■□□ 2.35
PSMD8-201ENST00000215071 ZEB1P37275 1124 aaPredicted RBP29.74■■■□□ 2.35
PSMD8-201ENST00000215071 ATP10BO94823 1461 aa29.7■■■□□ 2.34
PSMD8-201ENST00000215071 UACAQ9BZF9 1416 aa29.7■■■□□ 2.34
PSMD8-201ENST00000215071 TROQ12816 1431 aaPredicted RBP29.69■■■□□ 2.34
PSMD8-201ENST00000215071 OSCARQ8IYS5 282 aa29.68■■■□□ 2.34
PSMD8-201ENST00000215071 ADCY10Q96PN6 1610 aa29.67■■■□□ 2.34
PSMD8-201ENST00000215071 MIA2Q96PC5 1412 aa29.65■■■□□ 2.34
PSMD8-201ENST00000215071 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
PSMD8-201ENST00000215071 ARID3CA6NKF2 412 aa29.63■■■□□ 2.33
PSMD8-201ENST00000215071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.63■■■□□ 2.33
PSMD8-201ENST00000215071 TCOF1Q13428 1488 aaKnown RBP29.62■■■□□ 2.33
PSMD8-201ENST00000215071 ABCC2Q92887 1545 aa29.61■■■□□ 2.33
PSMD8-201ENST00000215071 UHRF1BP1LA0JNW5 1464 aa29.6■■■□□ 2.33
PSMD8-201ENST00000215071 PTPN23Q9H3S7 1636 aa29.59■■■□□ 2.33
PSMD8-201ENST00000215071 FAM50AQ14320 339 aaKnown RBP29.58■■■□□ 2.33
PSMD8-201ENST00000215071 CCER1Q8TC90 406 aaPredicted RBP29.57■■■□□ 2.32
PSMD8-201ENST00000215071 PLEKHD1A6NEE1 506 aa29.55■■■□□ 2.32
PSMD8-201ENST00000215071 KIF14Q15058 1648 aa29.49■■■□□ 2.31
PSMD8-201ENST00000215071 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
PSMD8-201ENST00000215071 KDM5BQ9UGL1 1544 aa29.46■■■□□ 2.31
PSMD8-201ENST00000215071 ABCC10Q5T3U5 1492 aa29.46■■■□□ 2.31
PSMD8-201ENST00000215071 ITGAEP38570 1179 aa29.46■■■□□ 2.31
PSMD8-201ENST00000215071 GPATCH8Q9UKJ3 1502 aaKnown RBP29.44■■■□□ 2.3
PSMD8-201ENST00000215071 SETD5Q9C0A6 1442 aa29.44■■■□□ 2.3
PSMD8-201ENST00000215071 PTPRKQ15262 1439 aa29.4■■■□□ 2.3
PSMD8-201ENST00000215071 ZCCHC11Q5TAX3 1644 aaKnown RBP29.38■■■□□ 2.29
PSMD8-201ENST00000215071 CDC42BPAQ5VT25 1732 aa29.37■■■□□ 2.29
PSMD8-201ENST00000215071 RAB3GAP2Q9H2M9 1393 aa29.37■■■□□ 2.29
PSMD8-201ENST00000215071 CLSPNQ9HAW4 1339 aa29.36■■■□□ 2.29
PSMD8-201ENST00000215071 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
PSMD8-201ENST00000215071 DHX57Q6P158 1386 aaKnown RBP29.34■■■□□ 2.29
PSMD8-201ENST00000215071 AKNAQ7Z591 1439 aa29.33■■■□□ 2.29
PSMD8-201ENST00000215071 DNMT1P26358 1616 aaKnown RBP29.32■■■□□ 2.28
PSMD8-201ENST00000215071 CFDP1Q9UEE9 299 aaPredicted RBP29.3■■■□□ 2.28
PSMD8-201ENST00000215071 CAMSAP2Q08AD1 1489 aa29.28■■■□□ 2.28
PSMD8-201ENST00000215071 DAPK1P53355 1430 aa29.26■■■□□ 2.27
PSMD8-201ENST00000215071 NAIPQ13075 1403 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms