RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
LAPTM4A-201ENST00000175091 EFCAB5A4FU69 1503 aa24.42■■□□□ 1.5
LAPTM4A-201ENST00000175091 SNAPC4Q5SXM2 1469 aa24.39■■□□□ 1.49
LAPTM4A-201ENST00000175091 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
LAPTM4A-201ENST00000175091 PPARGC1BQ86YN6 1023 aaKnown RBP24.35■■□□□ 1.49
LAPTM4A-201ENST00000175091 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
LAPTM4A-201ENST00000175091 IQGAP2Q13576 1575 aa24.28■■□□□ 1.48
LAPTM4A-201ENST00000175091 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
LAPTM4A-201ENST00000175091 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
LAPTM4A-201ENST00000175091 PCF11O94913 1555 aaKnown RBP24.24■■□□□ 1.47
LAPTM4A-201ENST00000175091 FHOD3Q2V2M9 1422 aa24.23■■□□□ 1.47
LAPTM4A-201ENST00000175091 APLP2Q06481 763 aa24.19■■□□□ 1.46
LAPTM4A-201ENST00000175091 CFAP43Q8NDM7 1665 aa24.17■■□□□ 1.46
LAPTM4A-201ENST00000175091 MAP3K1Q13233 1512 aa24.17■■□□□ 1.46
LAPTM4A-201ENST00000175091 UGGT2Q9NYU1 1516 aa24.16■■□□□ 1.46
LAPTM4A-201ENST00000175091 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
LAPTM4A-201ENST00000175091 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
LAPTM4A-201ENST00000175091 FYCO1Q9BQS8 1478 aa24.15■■□□□ 1.46
LAPTM4A-201ENST00000175091 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
LAPTM4A-201ENST00000175091 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
LAPTM4A-201ENST00000175091 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
LAPTM4A-201ENST00000175091 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
LAPTM4A-201ENST00000175091 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
LAPTM4A-201ENST00000175091 NUP160Q12769 1436 aa24.09■■□□□ 1.45
LAPTM4A-201ENST00000175091 KIAA0556O60303 1618 aa24.05■■□□□ 1.44
LAPTM4A-201ENST00000175091 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
LAPTM4A-201ENST00000175091 CHD1O14646 1710 aa24.03■■□□□ 1.44
LAPTM4A-201ENST00000175091 LRRIQ1Q96JM4 1722 aa24.03■■□□□ 1.44
LAPTM4A-201ENST00000175091 KANK4Q5T7N3 995 aaPredicted RBP24.02■■□□□ 1.44
LAPTM4A-201ENST00000175091 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
LAPTM4A-201ENST00000175091 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
LAPTM4A-201ENST00000175091 HECW1Q76N89 1606 aa23.95■■□□□ 1.42
LAPTM4A-201ENST00000175091 HRCP23327 699 aa23.94■■□□□ 1.42
LAPTM4A-201ENST00000175091 FBLN2P98095 1184 aa23.94■■□□□ 1.42
LAPTM4A-201ENST00000175091 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.41
LAPTM4A-201ENST00000175091 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
LAPTM4A-201ENST00000175091 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.4
LAPTM4A-201ENST00000175091 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
LAPTM4A-201ENST00000175091 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
LAPTM4A-201ENST00000175091 CARMIL2Q6F5E8 1435 aa23.81■■□□□ 1.4
LAPTM4A-201ENST00000175091 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
LAPTM4A-201ENST00000175091 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
LAPTM4A-201ENST00000175091 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
LAPTM4A-201ENST00000175091 PHLDB1Q86UU1 1377 aa23.75■■□□□ 1.39
LAPTM4A-201ENST00000175091 CCNB3Q8WWL7 1395 aa23.75■■□□□ 1.39
LAPTM4A-201ENST00000175091 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
LAPTM4A-201ENST00000175091 SUPT6HQ7KZ85 1726 aaKnown RBP23.75■■□□□ 1.39
LAPTM4A-201ENST00000175091 NUP153P49790 1475 aaKnown RBP23.74■■□□□ 1.39
LAPTM4A-201ENST00000175091 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
LAPTM4A-201ENST00000175091 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
LAPTM4A-201ENST00000175091 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
LAPTM4A-201ENST00000175091 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
LAPTM4A-201ENST00000175091 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
LAPTM4A-201ENST00000175091 ABCA8O94911 1581 aa23.68■■□□□ 1.38
LAPTM4A-201ENST00000175091 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
LAPTM4A-201ENST00000175091 NCOA2Q15596 1464 aa23.67■■□□□ 1.38
LAPTM4A-201ENST00000175091 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
LAPTM4A-201ENST00000175091 FGD6Q6ZV73 1430 aa23.6■■□□□ 1.37
LAPTM4A-201ENST00000175091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
LAPTM4A-201ENST00000175091 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.37
LAPTM4A-201ENST00000175091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.58■■□□□ 1.372e-6■■■■□ 19.8
LAPTM4A-201ENST00000175091 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
LAPTM4A-201ENST00000175091 ZEB1P37275 1124 aaPredicted RBP23.57■■□□□ 1.36
LAPTM4A-201ENST00000175091 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
LAPTM4A-201ENST00000175091 PTPRGP23470 1445 aa23.53■■□□□ 1.36
LAPTM4A-201ENST00000175091 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
LAPTM4A-201ENST00000175091 PTPN23Q9H3S7 1636 aa23.5■■□□□ 1.35
LAPTM4A-201ENST00000175091 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
LAPTM4A-201ENST00000175091 TROQ12816 1431 aaPredicted RBP23.48■■□□□ 1.35
LAPTM4A-201ENST00000175091 TCOF1Q13428 1488 aaKnown RBP23.46■■□□□ 1.35
LAPTM4A-201ENST00000175091 ATP10BO94823 1461 aa23.45■■□□□ 1.34
LAPTM4A-201ENST00000175091 FAM50AQ14320 339 aaKnown RBP23.45■■□□□ 1.34
LAPTM4A-201ENST00000175091 KIF14Q15058 1648 aa23.45■■□□□ 1.34
LAPTM4A-201ENST00000175091 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
LAPTM4A-201ENST00000175091 UACAQ9BZF9 1416 aa23.44■■□□□ 1.34
LAPTM4A-201ENST00000175091 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
LAPTM4A-201ENST00000175091 MIA2Q96PC5 1412 aa23.43■■□□□ 1.34
LAPTM4A-201ENST00000175091 ITSN2Q9NZM3 1697 aa23.43■■□□□ 1.34
LAPTM4A-201ENST00000175091 ITGAEP38570 1179 aa23.4■■□□□ 1.34
LAPTM4A-201ENST00000175091 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
LAPTM4A-201ENST00000175091 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
LAPTM4A-201ENST00000175091 PTPRKQ15262 1439 aa23.32■■□□□ 1.32
LAPTM4A-201ENST00000175091 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
LAPTM4A-201ENST00000175091 ABCC10Q5T3U5 1492 aa23.32■■□□□ 1.32
LAPTM4A-201ENST00000175091 RAB3GAP2Q9H2M9 1393 aa23.31■■□□□ 1.32
LAPTM4A-201ENST00000175091 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
LAPTM4A-201ENST00000175091 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
LAPTM4A-201ENST00000175091 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
LAPTM4A-201ENST00000175091 DNMT1P26358 1616 aaKnown RBP23.28■■□□□ 1.32
LAPTM4A-201ENST00000175091 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
LAPTM4A-201ENST00000175091 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
LAPTM4A-201ENST00000175091 KDM5BQ9UGL1 1544 aa23.26■■□□□ 1.31
LAPTM4A-201ENST00000175091 HFM1A2PYH4 1435 aa23.26■■□□□ 1.31
LAPTM4A-201ENST00000175091 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
LAPTM4A-201ENST00000175091 CAMSAP2Q08AD1 1489 aa23.23■■□□□ 1.31
LAPTM4A-201ENST00000175091 AKNAQ7Z591 1439 aa23.23■■□□□ 1.31
LAPTM4A-201ENST00000175091 PREX2Q70Z35 1606 aa23.22■■□□□ 1.31
LAPTM4A-201ENST00000175091 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
LAPTM4A-201ENST00000175091 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
LAPTM4A-201ENST00000175091 DAPK1P53355 1430 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms