RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 PPP1R15AO75807 674 aaPredicted RBP20.76■□□□□ 0.91
PDZD4-201ENST00000164640 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
PDZD4-201ENST00000164640 PPP4R2Q9NY27 417 aa20.75■□□□□ 0.91
PDZD4-201ENST00000164640 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
PDZD4-201ENST00000164640 ANP32AP39687 249 aaKnown RBP20.74■□□□□ 0.91
PDZD4-201ENST00000164640 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
PDZD4-201ENST00000164640 CCDC136Q96JN2 1154 aa20.73■□□□□ 0.91
PDZD4-201ENST00000164640 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
PDZD4-201ENST00000164640 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
PDZD4-201ENST00000164640 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
PDZD4-201ENST00000164640 KIF21BO75037 1637 aa20.71■□□□□ 0.91
PDZD4-201ENST00000164640 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
PDZD4-201ENST00000164640 ZBTB47Q9UFB7 747 aaPredicted RBP20.68■□□□□ 0.9
PDZD4-201ENST00000164640 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
PDZD4-201ENST00000164640 NACADO15069 1562 aa20.65■□□□□ 0.9
PDZD4-201ENST00000164640 PAK3O75914 559 aaPredicted RBP20.65■□□□□ 0.9
PDZD4-201ENST00000164640 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
PDZD4-201ENST00000164640 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
PDZD4-201ENST00000164640 SETD5Q9C0A6 1442 aa20.61■□□□□ 0.89
PDZD4-201ENST00000164640 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
PDZD4-201ENST00000164640 EIF5BO60841 1220 aaKnown RBP20.6■□□□□ 0.89
PDZD4-201ENST00000164640 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
PDZD4-201ENST00000164640 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
PDZD4-201ENST00000164640 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
PDZD4-201ENST00000164640 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.87
PDZD4-201ENST00000164640 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
PDZD4-201ENST00000164640 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
PDZD4-201ENST00000164640 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
PDZD4-201ENST00000164640 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
PDZD4-201ENST00000164640 NEFMP07197 916 aa20.45■□□□□ 0.86
PDZD4-201ENST00000164640 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
PDZD4-201ENST00000164640 IPO9Q96P70 1041 aaKnown RBP20.45■□□□□ 0.86
PDZD4-201ENST00000164640 ERICH6BQ5W0A0 696 aa20.43■□□□□ 0.86
PDZD4-201ENST00000164640 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
PDZD4-201ENST00000164640 MAPKBP1O60336 1514 aa20.41■□□□□ 0.86
PDZD4-201ENST00000164640 EIF4G2P78344 907 aaKnown RBP eCLIP20.39■□□□□ 0.86
PDZD4-201ENST00000164640 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.85
PDZD4-201ENST00000164640 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
PDZD4-201ENST00000164640 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
PDZD4-201ENST00000164640 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
PDZD4-201ENST00000164640 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
PDZD4-201ENST00000164640 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
PDZD4-201ENST00000164640 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
PDZD4-201ENST00000164640 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
PDZD4-201ENST00000164640 CUX2O14529 1486 aa20.25■□□□□ 0.83
PDZD4-201ENST00000164640 ZBED9Q6R2W3 1325 aa20.23■□□□□ 0.83
PDZD4-201ENST00000164640 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
PDZD4-201ENST00000164640 FOXD1Q16676 465 aa20.21■□□□□ 0.83
PDZD4-201ENST00000164640 AKNAQ7Z591 1439 aa20.21■□□□□ 0.83
PDZD4-201ENST00000164640 TMC1Q8TDI8 760 aa20.19■□□□□ 0.82
PDZD4-201ENST00000164640 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
PDZD4-201ENST00000164640 BRPF3Q9ULD4 1205 aa20.17■□□□□ 0.82
PDZD4-201ENST00000164640 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
PDZD4-201ENST00000164640 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
PDZD4-201ENST00000164640 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.81
PDZD4-201ENST00000164640 MTUS2Q5JR59 1369 aa20.14■□□□□ 0.81
PDZD4-201ENST00000164640 SLC4A3P48751 1232 aa20.12■□□□□ 0.81
PDZD4-201ENST00000164640 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
PDZD4-201ENST00000164640 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
PDZD4-201ENST00000164640 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
PDZD4-201ENST00000164640 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
PDZD4-201ENST00000164640 PDE4AP27815 886 aa20.09■□□□□ 0.81
PDZD4-201ENST00000164640 ARXQ96QS3 562 aa20.09■□□□□ 0.81
PDZD4-201ENST00000164640 CCDC18Q5T9S5 1454 aa20.07■□□□□ 0.8
PDZD4-201ENST00000164640 EXOC6Q8TAG9 804 aa20.07■□□□□ 0.8
PDZD4-201ENST00000164640 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
PDZD4-201ENST00000164640 CARMIL1Q5VZK9 1371 aa20.03■□□□□ 0.8
PDZD4-201ENST00000164640 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
PDZD4-201ENST00000164640 GSE1Q14687 1217 aa20.01■□□□□ 0.79
PDZD4-201ENST00000164640 USP35Q9P2H5 1018 aa20.01■□□□□ 0.79
PDZD4-201ENST00000164640 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
PDZD4-201ENST00000164640 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
PDZD4-201ENST00000164640 FHOD3Q2V2M9 1422 aa20.01■□□□□ 0.79
PDZD4-201ENST00000164640 SKAP1Q86WV1 359 aa20■□□□□ 0.79
PDZD4-201ENST00000164640 CCDC7Q96M83 1385 aa20■□□□□ 0.79
PDZD4-201ENST00000164640 ATAD2BQ9ULI0 1458 aa19.98■□□□□ 0.79
PDZD4-201ENST00000164640 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
PDZD4-201ENST00000164640 DDRGK1Q96HY6 314 aa19.98■□□□□ 0.79
PDZD4-201ENST00000164640 KIF7Q2M1P5 1343 aa19.96■□□□□ 0.79
PDZD4-201ENST00000164640 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
PDZD4-201ENST00000164640 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
PDZD4-201ENST00000164640 PLIN1O60240 522 aa19.95■□□□□ 0.78
PDZD4-201ENST00000164640 FRAT1Q92837 279 aaPredicted RBP19.94■□□□□ 0.78
PDZD4-201ENST00000164640 RCAN3Q9UKA8 241 aa19.94■□□□□ 0.78
PDZD4-201ENST00000164640 SLC4A1APQ9BWU0 796 aaKnown RBP19.93■□□□□ 0.78
PDZD4-201ENST00000164640 NFKBIBQ15653 356 aa19.92■□□□□ 0.78
PDZD4-201ENST00000164640 FMN1Q68DA7 1419 aa19.92■□□□□ 0.78
PDZD4-201ENST00000164640 RRP1P56182 461 aaKnown RBP19.91■□□□□ 0.78
PDZD4-201ENST00000164640 IGF1RP08069 1367 aa19.9■□□□□ 0.78
PDZD4-201ENST00000164640 UBE2Q2Q8WVN8 375 aa19.9■□□□□ 0.78
PDZD4-201ENST00000164640 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
PDZD4-201ENST00000164640 BACH2Q9BYV9 841 aa19.89■□□□□ 0.77
PDZD4-201ENST00000164640 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.77
PDZD4-201ENST00000164640 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
PDZD4-201ENST00000164640 RGS3P49796 1198 aa19.88■□□□□ 0.77
PDZD4-201ENST00000164640 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
PDZD4-201ENST00000164640 AQRO60306 1485 aaKnown RBP eCLIP19.83■□□□□ 0.76
PDZD4-201ENST00000164640 CUX1P39880 1505 aa19.81■□□□□ 0.76
PDZD4-201ENST00000164640 PTPRKQ15262 1439 aa19.8■□□□□ 0.76
PDZD4-201ENST00000164640 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms