RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 NCLP19338 710 aaKnown RBP20.94■□□□□ 0.94
RB1CC1-201ENST00000025008 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
RB1CC1-201ENST00000025008 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
RB1CC1-201ENST00000025008 MTUS2Q5JR59 1369 aa20.9■□□□□ 0.94
RB1CC1-201ENST00000025008 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.93
RB1CC1-201ENST00000025008 KDM2AQ9Y2K7 1162 aa20.87■□□□□ 0.93
RB1CC1-201ENST00000025008 NAP1L5Q96NT1 182 aaPredicted RBP20.86■□□□□ 0.93
RB1CC1-201ENST00000025008 EEA1Q15075 1411 aa20.85■□□□□ 0.93
RB1CC1-201ENST00000025008 LAS1LQ9Y4W2 734 aaKnown RBP20.84■□□□□ 0.93
RB1CC1-201ENST00000025008 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
RB1CC1-201ENST00000025008 RTN4Q9NQC3 1192 aaKnown RBP20.84■□□□□ 0.93
RB1CC1-201ENST00000025008 TSPY4P0CV99 314 aa20.83■□□□□ 0.93
RB1CC1-201ENST00000025008 TSPY10P0CW01 314 aa20.83■□□□□ 0.93
RB1CC1-201ENST00000025008 PTMAP06454 111 aaKnown RBP20.83■□□□□ 0.92
RB1CC1-201ENST00000025008 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
RB1CC1-201ENST00000025008 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
RB1CC1-201ENST00000025008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.78■□□□□ 0.925e-7■■□□□ 12
RB1CC1-201ENST00000025008 SCRIBQ14160 1630 aa20.77■□□□□ 0.92
RB1CC1-201ENST00000025008 DEKP35659 375 aaKnown RBP20.77■□□□□ 0.92
RB1CC1-201ENST00000025008 DNTTIP2Q5QJE6 756 aaKnown RBP20.77■□□□□ 0.91
RB1CC1-201ENST00000025008 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
RB1CC1-201ENST00000025008 RBM19Q9Y4C8 960 aaKnown RBP20.73■□□□□ 0.91
RB1CC1-201ENST00000025008 RRP7BPQ9NSQ0 103 aa20.71■□□□□ 0.91
RB1CC1-201ENST00000025008 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
RB1CC1-201ENST00000025008 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
RB1CC1-201ENST00000025008 CASC1Q6TDU7 716 aa20.68■□□□□ 0.9
RB1CC1-201ENST00000025008 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
RB1CC1-201ENST00000025008 CDCA8Q53HL2 280 aa20.67■□□□□ 0.9
RB1CC1-201ENST00000025008 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
RB1CC1-201ENST00000025008 CDK11BP21127 795 aaKnown RBP20.67■□□□□ 0.9
RB1CC1-201ENST00000025008 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
RB1CC1-201ENST00000025008 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
RB1CC1-201ENST00000025008 RGS3P49796 1198 aa20.66■□□□□ 0.9
RB1CC1-201ENST00000025008 ZRSR1Q15695 479 aaKnown RBP20.64■□□□□ 0.89
RB1CC1-201ENST00000025008 FTSJ3Q8IY81 847 aaKnown RBP20.64■□□□□ 0.89
RB1CC1-201ENST00000025008 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.89
RB1CC1-201ENST00000025008 TIMELESSQ9UNS1 1208 aa20.59■□□□□ 0.89
RB1CC1-201ENST00000025008 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.88
RB1CC1-201ENST00000025008 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.88
RB1CC1-201ENST00000025008 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.88
RB1CC1-201ENST00000025008 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
RB1CC1-201ENST00000025008 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
RB1CC1-201ENST00000025008 MS4A1P11836 297 aa20.55■□□□□ 0.88
RB1CC1-201ENST00000025008 SIN3AQ96ST3 1273 aa20.54■□□□□ 0.88
RB1CC1-201ENST00000025008 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
RB1CC1-201ENST00000025008 MSNP26038 577 aaKnown RBP20.51■□□□□ 0.87
RB1CC1-201ENST00000025008 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
RB1CC1-201ENST00000025008 HSCBQ8IWL3 235 aa20.5■□□□□ 0.87
RB1CC1-201ENST00000025008 TSHZ2Q9NRE2 1034 aa20.49■□□□□ 0.87
RB1CC1-201ENST00000025008 CHAF1AQ13111 956 aaPredicted RBP20.48■□□□□ 0.87
RB1CC1-201ENST00000025008 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
RB1CC1-201ENST00000025008 RGL3Q3MIN7 710 aa20.48■□□□□ 0.87
RB1CC1-201ENST00000025008 FRAT1Q92837 279 aaPredicted RBP20.48■□□□□ 0.87
RB1CC1-201ENST00000025008 PLCB2Q00722 1185 aa20.48■□□□□ 0.87
RB1CC1-201ENST00000025008 NRDCO43847 1150 aa20.47■□□□□ 0.87
RB1CC1-201ENST00000025008 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
RB1CC1-201ENST00000025008 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
RB1CC1-201ENST00000025008 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
RB1CC1-201ENST00000025008 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
RB1CC1-201ENST00000025008 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
RB1CC1-201ENST00000025008 TPRNQ4KMQ1 711 aa20.41■□□□□ 0.86
RB1CC1-201ENST00000025008 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
RB1CC1-201ENST00000025008 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
RB1CC1-201ENST00000025008 PTMSP20962 102 aa20.38■□□□□ 0.85
RB1CC1-201ENST00000025008 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
RB1CC1-201ENST00000025008 CFAP44Q96MT7 982 aa20.37■□□□□ 0.85
RB1CC1-201ENST00000025008 CFDP1Q9UEE9 299 aaPredicted RBP20.36■□□□□ 0.85
RB1CC1-201ENST00000025008 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
RB1CC1-201ENST00000025008 IPO9Q96P70 1041 aaKnown RBP20.34■□□□□ 0.85
RB1CC1-201ENST00000025008 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
RB1CC1-201ENST00000025008 GBP4Q96PP9 640 aa20.33■□□□□ 0.84
RB1CC1-201ENST00000025008 GOLGA6L4A6NEF3 574 aa20.32■□□□□ 0.84
RB1CC1-201ENST00000025008 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
RB1CC1-201ENST00000025008 TMF1P82094 1093 aa20.29■□□□□ 0.84
RB1CC1-201ENST00000025008 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
RB1CC1-201ENST00000025008 MCCP23508 829 aa20.27■□□□□ 0.84
RB1CC1-201ENST00000025008 A0A0G2JS52 829 aa20.27■□□□□ 0.84
RB1CC1-201ENST00000025008 HSPA5P11021 654 aaKnown RBP20.27■□□□□ 0.84
RB1CC1-201ENST00000025008 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
RB1CC1-201ENST00000025008 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
RB1CC1-201ENST00000025008 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
RB1CC1-201ENST00000025008 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
RB1CC1-201ENST00000025008 FGD1P98174 961 aa20.25■□□□□ 0.83
RB1CC1-201ENST00000025008 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
RB1CC1-201ENST00000025008 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
RB1CC1-201ENST00000025008 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
RB1CC1-201ENST00000025008 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
RB1CC1-201ENST00000025008 KCNJ4P48050 445 aa20.23■□□□□ 0.83
RB1CC1-201ENST00000025008 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
RB1CC1-201ENST00000025008 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
RB1CC1-201ENST00000025008 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
RB1CC1-201ENST00000025008 KTN1Q86UP2 1357 aaKnown RBP20.2■□□□□ 0.83
RB1CC1-201ENST00000025008 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
RB1CC1-201ENST00000025008 DRC7Q8IY82 874 aa20.2■□□□□ 0.82
RB1CC1-201ENST00000025008 ZBTB7CA1YPR0 619 aa20.19■□□□□ 0.82
RB1CC1-201ENST00000025008 OS9Q13438 667 aaPredicted RBP20.19■□□□□ 0.82
RB1CC1-201ENST00000025008 GZF1Q9H116 711 aaPredicted RBP20.19■□□□□ 0.82
RB1CC1-201ENST00000025008 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
RB1CC1-201ENST00000025008 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
RB1CC1-201ENST00000025008 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms