RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Gm156Q58A37 223 aa23.76■■□□□ 1.39
Ldb3-207ENSMUST00000227819 SynmQ70IV5 1561 aa23.76■■□□□ 1.39
Ldb3-207ENSMUST00000227819 Gpatch8A2A6A1 1505 aa23.75■■□□□ 1.39
Ldb3-207ENSMUST00000227819 Abcc1O35379 1528 aa23.74■■□□□ 1.39
Ldb3-207ENSMUST00000227819 Chic1Q8CBW7 227 aa23.73■■□□□ 1.39
Ldb3-207ENSMUST00000227819 PtprtQ99M80 1454 aa23.7■■□□□ 1.38
Ldb3-207ENSMUST00000227819 Chd1P40201 1711 aa23.65■■□□□ 1.38
Ldb3-207ENSMUST00000227819 Zeb1Q64318 1117 aa23.64■■□□□ 1.38
Ldb3-207ENSMUST00000227819 Ythdc2B2RR83 1445 aaKnown RBP23.64■■□□□ 1.37
Ldb3-207ENSMUST00000227819 CadpsQ80TJ1 1355 aa23.61■■□□□ 1.37
Ldb3-207ENSMUST00000227819 Dnmt1P13864 1620 aaKnown RBP23.6■■□□□ 1.37
Ldb3-207ENSMUST00000227819 Abca16E9PWJ7 1678 aa23.59■■□□□ 1.37
Ldb3-207ENSMUST00000227819 Rapgef2Q8CHG7 1496 aa23.57■■□□□ 1.36
Ldb3-207ENSMUST00000227819 Pprc1Q6NZN1 1644 aa23.57■■□□□ 1.36
Ldb3-207ENSMUST00000227819 Abcc2Q8VI47 1543 aa23.55■■□□□ 1.36
Ldb3-207ENSMUST00000227819 WizO88286 1684 aaKnown RBP23.55■■□□□ 1.36
Ldb3-207ENSMUST00000227819 TchhA0A0B4J1F9 1599 aa23.55■■□□□ 1.36
Ldb3-207ENSMUST00000227819 Neo1P97798 1493 aa23.54■■□□□ 1.36
Ldb3-207ENSMUST00000227819 Soga1E1U8D0 1418 aa23.54■■□□□ 1.36
Ldb3-207ENSMUST00000227819 BC005561E9Q5E2 1589 aa23.54■■□□□ 1.36
Ldb3-207ENSMUST00000227819 Arhgap27A2AB59 869 aa23.54■■□□□ 1.36
Ldb3-207ENSMUST00000227819 PxdnQ3UQ28 1475 aa23.53■■□□□ 1.36
Ldb3-207ENSMUST00000227819 Map3k4O08648 1597 aa23.5■■□□□ 1.35
Ldb3-207ENSMUST00000227819 Adamts12Q811B3 1600 aa23.47■■□□□ 1.35
Ldb3-207ENSMUST00000227819 EprsQ8CGC7 1512 aaKnown RBP23.47■■□□□ 1.35
Ldb3-207ENSMUST00000227819 Gm14025A2AP89 1413 aa23.44■■□□□ 1.34
Ldb3-207ENSMUST00000227819 Mroh2bQ7M6Y6 1581 aa23.44■■□□□ 1.34
Ldb3-207ENSMUST00000227819 Setbp1Q9Z180 1582 aa23.42■■□□□ 1.34
Ldb3-207ENSMUST00000227819 Npm2Q80W85 207 aa23.41■■□□□ 1.34
Ldb3-207ENSMUST00000227819 Eif4g1Q6NZJ6 1600 aaKnown RBP23.41■■□□□ 1.34
Ldb3-207ENSMUST00000227819 Ak9G3UYQ4 1894 aa23.35■■□□□ 1.33
Ldb3-207ENSMUST00000227819 Slx4Q6P1D7 1565 aa23.35■■□□□ 1.33
Ldb3-207ENSMUST00000227819 AI481877A2ALV5 1481 aa23.33■■□□□ 1.32
Ldb3-207ENSMUST00000227819 Ppp1r18Q8BQ30 594 aa23.32■■□□□ 1.32
Ldb3-207ENSMUST00000227819 Rpap1Q80TE0 1409 aa23.31■■□□□ 1.32
Ldb3-207ENSMUST00000227819 Arhgef12Q8R4H2 1543 aaKnown RBP23.31■■□□□ 1.32
Ldb3-207ENSMUST00000227819 Ifnlr1Q8CGK5 535 aa23.29■■□□□ 1.32
Ldb3-207ENSMUST00000227819 Carmil1Q6EDY6 1374 aa23.26■■□□□ 1.31
Ldb3-207ENSMUST00000227819 Gm7298A0A0N4SVU1 1476 aa23.25■■□□□ 1.31
Ldb3-207ENSMUST00000227819 Jph4Q80WT0 628 aa23.22■■□□□ 1.31
Ldb3-207ENSMUST00000227819 Map3k1P53349 1493 aa23.22■■□□□ 1.31
Ldb3-207ENSMUST00000227819 Fkbp15Q6P9Q6 1216 aaKnown RBP23.18■■□□□ 1.3
Ldb3-207ENSMUST00000227819 Arhgap35Q91YM2 1499 aa23.18■■□□□ 1.3
Ldb3-207ENSMUST00000227819 Abca5Q8K448 1642 aa23.18■■□□□ 1.3
Ldb3-207ENSMUST00000227819 Polr1aO35134 1717 aaKnown RBP23.12■■□□□ 1.29
Ldb3-207ENSMUST00000227819 Gab3Q8BSM5 595 aa23.11■■□□□ 1.29
Ldb3-207ENSMUST00000227819 Clasp1Q80TV8 1535 aaKnown RBP23.1■■□□□ 1.29
Ldb3-207ENSMUST00000227819 WrnO09053 1401 aa23.1■■□□□ 1.29
Ldb3-207ENSMUST00000227819 Arid3cA6PWV5 409 aa23.07■■□□□ 1.28
Ldb3-207ENSMUST00000227819 Ttc37F8VPK0 1563 aa23.07■■□□□ 1.28
Ldb3-207ENSMUST00000227819 AdgbG3UZ78 1657 aa23.06■■□□□ 1.28
Ldb3-207ENSMUST00000227819 Rrbp1Q99PL5 1605 aaKnown RBP23.05■■□□□ 1.28
Ldb3-207ENSMUST00000227819 Cux1P53564 1515 aa23.05■■□□□ 1.28
Ldb3-207ENSMUST00000227819 Lrrc9Q8CDN9 1456 aa23.04■■□□□ 1.28
Ldb3-207ENSMUST00000227819 Mapkbp1Q6NS57 1503 aa23.03■■□□□ 1.28
Ldb3-207ENSMUST00000227819 Znf608Q56A10 1511 aa23.01■■□□□ 1.27
Ldb3-207ENSMUST00000227819 Kdm5bQ80Y84 1544 aa23■■□□□ 1.27
Ldb3-207ENSMUST00000227819 Depdc5P61460 1591 aa23■■□□□ 1.27
Ldb3-207ENSMUST00000227819 Igf1rQ60751 1373 aa22.99■■□□□ 1.27
Ldb3-207ENSMUST00000227819 Clip1Q922J3 1391 aa22.98■■□□□ 1.27
Ldb3-207ENSMUST00000227819 Wdr7Q920I9 1489 aa22.92■■□□□ 1.26
Ldb3-207ENSMUST00000227819 Cul7Q8VE73 1689 aa22.91■■□□□ 1.26
Ldb3-207ENSMUST00000227819 Cep162Q6ZQ06 1403 aa22.91■■□□□ 1.26
Ldb3-207ENSMUST00000227819 Fyco1Q8VDC1 1437 aa22.91■■□□□ 1.26
Ldb3-207ENSMUST00000227819 Plekhg3Q4VAC9 1341 aa22.91■■□□□ 1.26
Ldb3-207ENSMUST00000227819 Zfyve16Q80U44 1528 aa22.9■■□□□ 1.26
Ldb3-207ENSMUST00000227819 Arhgap31A6X8Z5 1425 aa22.89■■□□□ 1.26
Ldb3-207ENSMUST00000227819 NhsB1AV60 1647 aa22.88■■□□□ 1.25
Ldb3-207ENSMUST00000227819 Myt1lP97500 1187 aa22.88■■□□□ 1.25
Ldb3-207ENSMUST00000227819 Arhgef11Q68FM7 1552 aa22.88■■□□□ 1.25
Ldb3-207ENSMUST00000227819 Ccdc141E9Q8Q6 1531 aa22.86■■□□□ 1.25
Ldb3-207ENSMUST00000227819 Fndc1E9Q043 1732 aa22.84■■□□□ 1.25
Ldb3-207ENSMUST00000227819 Plppr3Q7TPB0 716 aa22.82■■□□□ 1.24
Ldb3-207ENSMUST00000227819 Atp10dQ8K2X1 1416 aa22.81■■□□□ 1.24
Ldb3-207ENSMUST00000227819 Mroh2aD3Z750 1679 aa22.77■■□□□ 1.24
Ldb3-207ENSMUST00000227819 Alpk3Q924C5 1678 aa22.76■■□□□ 1.23
Ldb3-207ENSMUST00000227819 Ankrd26Q811D2 1581 aa22.76■■□□□ 1.23
Ldb3-207ENSMUST00000227819 Gcc2Q8CHG3 1679 aa22.75■■□□□ 1.23
Ldb3-207ENSMUST00000227819 HrcG5E8J6 738 aa22.75■■□□□ 1.23
Ldb3-207ENSMUST00000227819 Dnajc5gQ8C632 165 aa22.73■■□□□ 1.23
Ldb3-207ENSMUST00000227819 AglF8VPN4 1532 aa22.72■■□□□ 1.23
Ldb3-207ENSMUST00000227819 Rapgef6Q5NCJ1 1609 aa22.7■■□□□ 1.22
Ldb3-207ENSMUST00000227819 Ncoa2Q61026 1462 aa22.66■■□□□ 1.22
Ldb3-207ENSMUST00000227819 Fancd2Q80V62 1450 aa22.66■■□□□ 1.22
Ldb3-207ENSMUST00000227819 Aebp1Q640N1 1128 aa22.65■■□□□ 1.22
Ldb3-207ENSMUST00000227819 Kiaa1210E9Q0C6 1637 aa22.65■■□□□ 1.22
Ldb3-207ENSMUST00000227819 Abca8bQ8K440 1620 aa22.65■■□□□ 1.22
Ldb3-207ENSMUST00000227819 BlmO88700 1416 aa22.64■■□□□ 1.21
Ldb3-207ENSMUST00000227819 Kif27Q7M6Z4 1394 aa22.63■■□□□ 1.21
Ldb3-207ENSMUST00000227819 Arap1Q4LDD4 1452 aa22.6■■□□□ 1.21
Ldb3-207ENSMUST00000227819 A2mQ6GQT1 1474 aa22.58■■□□□ 1.21
Ldb3-207ENSMUST00000227819 Magi1Q6RHR9 1471 aa22.57■■□□□ 1.2
Ldb3-207ENSMUST00000227819 Rnf17Q99MV7 1640 aa22.57■■□□□ 1.2
Ldb3-207ENSMUST00000227819 Prex2Q3LAC4 1598 aa22.55■■□□□ 1.2
Ldb3-207ENSMUST00000227819 MlecQ6ZQI3 291 aaKnown RBP22.54■■□□□ 1.2
Ldb3-207ENSMUST00000227819 Setd5Q5XJV7 1441 aa22.51■■□□□ 1.19
Ldb3-207ENSMUST00000227819 Erich3F6QRE9 1637 aa22.51■■□□□ 1.19
Ldb3-207ENSMUST00000227819 Lmo7E9PYF4 1699 aaKnown RBP22.51■■□□□ 1.19
Ldb3-207ENSMUST00000227819 Ap3b1Q9Z1T1 1105 aa22.5■■□□□ 1.19
Ldb3-207ENSMUST00000227819 Pcf11G3X9Z4 1553 aa22.47■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms