RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Mroh2bQ7M6Y6 1581 aa18.93■□□□□ 0.62
Ssr1-203ENSMUST00000225246 Naip1Q9QWK5 1403 aa18.93■□□□□ 0.62
Ssr1-203ENSMUST00000225246 Ankrd26Q811D2 1581 aa18.9■□□□□ 0.62
Ssr1-203ENSMUST00000225246 Grin2bQ01097 1482 aa18.9■□□□□ 0.62
Ssr1-203ENSMUST00000225246 Kif15Q6P9L6 1387 aa18.88■□□□□ 0.61
Ssr1-203ENSMUST00000225246 Tnnt3Q9QZ47 272 aa18.87■□□□□ 0.61
Ssr1-203ENSMUST00000225246 Unc13aQ4KUS2 1712 aa18.84■□□□□ 0.61
Ssr1-203ENSMUST00000225246 UacaQ8CGB3 1411 aa18.82■□□□□ 0.6
Ssr1-203ENSMUST00000225246 Pcf11G3X9Z4 1553 aa18.81■□□□□ 0.6
Ssr1-203ENSMUST00000225246 Lmo7E9PYF4 1699 aaKnown RBP18.81■□□□□ 0.6
Ssr1-203ENSMUST00000225246 BlmO88700 1416 aa18.79■□□□□ 0.6
Ssr1-203ENSMUST00000225246 Slx4Q6P1D7 1565 aa18.79■□□□□ 0.6
Ssr1-203ENSMUST00000225246 Eid3Q3V124 375 aa18.78■□□□□ 0.6
Ssr1-203ENSMUST00000225246 Peg3Q3URU2 1571 aa18.78■□□□□ 0.6
Ssr1-203ENSMUST00000225246 CntlnA2AM05 1397 aa18.77■□□□□ 0.6
Ssr1-203ENSMUST00000225246 Ankrd36D3Z4K0 1415 aa18.77■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Ap3b1Q9Z1T1 1105 aa18.77■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Rpap1Q80TE0 1409 aa18.75■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Fhad1A6PWD2 1420 aa18.74■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Ccer2J3QPU5 274 aa18.74■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Phldb1Q6PDH0 1371 aaKnown RBP18.72■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Carmil1Q6EDY6 1374 aa18.71■□□□□ 0.59
Ssr1-203ENSMUST00000225246 Camsap2Q8C1B1 1461 aa18.7■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Mia2Q91ZV0 1396 aa18.7■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Il27Q8K3I6 234 aa18.7■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Efcab5A0JP43 1406 aa18.69■□□□□ 0.58
Ssr1-203ENSMUST00000225246 3425401B19RikD3Z1D3 1412 aa18.69■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Vps8Q0P5W1 1427 aa18.67■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Fyco1Q8VDC1 1437 aa18.67■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Hnrnpul2Q00PI9 745 aaKnown RBP18.66■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Cux1P53564 1515 aa18.64■□□□□ 0.58
Ssr1-203ENSMUST00000225246 Stra8P70278 393 aa18.64■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Gm13697A2AK42 830 aa18.63■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Urb2E9Q7L1 1524 aaKnown RBP18.63■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Crocc2F6XLV1 1638 aa18.63■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Dhx29Q6PGC1 1365 aaKnown RBP18.62■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Dnajc5P60904 198 aa18.61■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Znf710Q3U288 666 aa18.61■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Ubl4bQ9CQ84 188 aa18.6■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Naip2Q9QUK4 1447 aa18.58■□□□□ 0.57
Ssr1-203ENSMUST00000225246 Gm38655A0A286YDK6 273 aa18.58■□□□□ 0.57
Ssr1-203ENSMUST00000225246 NclP09405 707 aaKnown RBP18.55■□□□□ 0.56
Ssr1-203ENSMUST00000225246 Gm1043A0A140LJC2 1431 aa18.55■□□□□ 0.56
Ssr1-203ENSMUST00000225246 PogzQ8BZH4 1409 aaKnown RBP18.53■□□□□ 0.56
Ssr1-203ENSMUST00000225246 Fam50aQ9WV03 339 aaKnown RBP18.52■□□□□ 0.56
Ssr1-203ENSMUST00000225246 Polr1aO35134 1717 aaKnown RBP18.52■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Fhod3Q76LL6 1578 aa18.52■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Gm7298A0A0N4SVU1 1476 aa18.52■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Mrc2Q64449 1479 aa18.52■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Ncoa2Q61026 1462 aa18.5■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Cux2P70298 1426 aa18.5■□□□□ 0.55
Ssr1-203ENSMUST00000225246 LrpprcQ6PB66 1392 aaKnown RBP18.5■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Cul7Q8VE73 1689 aa18.5■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Duox2A2AQ99 1517 aa18.49■□□□□ 0.55
Ssr1-203ENSMUST00000225246 SynmQ70IV5 1561 aa18.48■□□□□ 0.55
Ssr1-203ENSMUST00000225246 SafbD3YXK2 937 aaKnown RBP18.48■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Hspa5P20029 655 aaKnown RBP18.47■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Naip5Q9R016 1403 aa18.47■□□□□ 0.55
Ssr1-203ENSMUST00000225246 Aebp1Q640N1 1128 aa18.45■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Dennd4bQ3U1Y4 1499 aa18.44■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Lmtk2Q3TYD6 1471 aa18.44■□□□□ 0.54
Ssr1-203ENSMUST00000225246 A2mQ6GQT1 1474 aa18.44■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Fam71e1A1L3C1 212 aa18.43■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Lmod2Q3UHZ5 550 aa18.43■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Smg6P61406 1418 aaKnown RBP18.41■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Anp32aO35381 247 aa18.39■□□□□ 0.54
Ssr1-203ENSMUST00000225246 Npm1Q61937 292 aaKnown RBP18.39■□□□□ 0.53
Ssr1-203ENSMUST00000225246 Mapk8ip2Q9ERE9 830 aa18.37■□□□□ 0.53
Ssr1-203ENSMUST00000225246 Kif21aQ9QXL2 1672 aa18.37■□□□□ 0.53
Ssr1-203ENSMUST00000225246 Samd9lQ69Z37 1561 aa18.36■□□□□ 0.53
Ssr1-203ENSMUST00000225246 Setbp1Q9Z180 1582 aa18.36■□□□□ 0.53
Ssr1-203ENSMUST00000225246 Pprc1Q6NZN1 1644 aa18.34■□□□□ 0.53
Ssr1-203ENSMUST00000225246 Rfx7F8VPJ6 1459 aa18.31■□□□□ 0.52
Ssr1-203ENSMUST00000225246 Ccnb3Q810T2 1396 aa18.3■□□□□ 0.52
Ssr1-203ENSMUST00000225246 Gcc2Q8CHG3 1679 aa18.29■□□□□ 0.52
Ssr1-203ENSMUST00000225246 Calr4Q3TQS0 420 aa18.28■□□□□ 0.52
Ssr1-203ENSMUST00000225246 Abca5Q8K448 1642 aa18.26■□□□□ 0.51
Ssr1-203ENSMUST00000225246 Gpatch8A2A6A1 1505 aa18.25■□□□□ 0.51
Ssr1-203ENSMUST00000225246 EprsQ8CGC7 1512 aaKnown RBP18.25■□□□□ 0.51
Ssr1-203ENSMUST00000225246 Washc2Q6PGL7 1334 aa18.23■□□□□ 0.51
Ssr1-203ENSMUST00000225246 Rtl5Q5DTT4 599 aa18.23■□□□□ 0.51
Ssr1-203ENSMUST00000225246 Ncoa1P70365 1447 aa18.22■□□□□ 0.51
Ssr1-203ENSMUST00000225246 Rad54l2Q99NG0 1466 aa18.21■□□□□ 0.51
Ssr1-203ENSMUST00000225246 Sin3aQ60520 1274 aaKnown RBP18.21■□□□□ 0.51
Ssr1-203ENSMUST00000225246 CadpsQ80TJ1 1355 aa18.2■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Lrriq1Q0P5X1 1673 aa18.2■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Pla2r1Q62028 1487 aa18.2■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Mphosph9A6H5Y1 991 aa18.18■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Mug1P28665 1476 aa18.17■□□□□ 0.5
Ssr1-203ENSMUST00000225246 NexmifQ5DTT1 1515 aa18.16■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Kif27Q7M6Z4 1394 aa18.16■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Rprd2Q6NXI6 1469 aaKnown RBP18.15■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Nolc1E9Q5C9 702 aaKnown RBP18.14■□□□□ 0.5
Ssr1-203ENSMUST00000225246 Ift140E9PY46 1464 aa18.12■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Magi3Q9EQJ9 1476 aa18.12■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Gm13695A2AK44 830 aa18.12■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Chic2Q9D9G3 165 aa18.12■□□□□ 0.49
Ssr1-203ENSMUST00000225246 BC005561E9Q5E2 1589 aa18.12■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Lamc1P02468 1607 aaKnown RBP18.12■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Adamts12Q811B3 1600 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms