RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Sin3aQ60520 1274 aaKnown RBP17.08■□□□□ 0.32
Herc4-208ENSMUST00000219577 Frmpd1A2AKB4 1549 aa17.07■□□□□ 0.32
Herc4-208ENSMUST00000219577 Aplp2Q06335 707 aa17.05■□□□□ 0.32
Herc4-208ENSMUST00000219577 Cux2P70298 1426 aa17.03■□□□□ 0.32
Herc4-208ENSMUST00000219577 Zbtb4Q5F293 982 aa17.01■□□□□ 0.31
Herc4-208ENSMUST00000219577 Aebp1Q640N1 1128 aa17■□□□□ 0.31
Herc4-208ENSMUST00000219577 AqrQ8CFQ3 1481 aaKnown RBP16.99■□□□□ 0.31
Herc4-208ENSMUST00000219577 Fkbp15Q6P9Q6 1216 aaKnown RBP16.99■□□□□ 0.31
Herc4-208ENSMUST00000219577 Stra8P70278 393 aa16.97■□□□□ 0.31
Herc4-208ENSMUST00000219577 Shroom4Q1W617 1475 aa16.97■□□□□ 0.31
Herc4-208ENSMUST00000219577 Tnnt3Q9QZ47 272 aa16.96■□□□□ 0.31
Herc4-208ENSMUST00000219577 Naip1Q9QWK5 1403 aa16.94■□□□□ 0.3
Herc4-208ENSMUST00000219577 Arhgef5E9Q7D5 1581 aa16.91■□□□□ 0.3
Herc4-208ENSMUST00000219577 NrkQ9R0G8 1455 aa16.88■□□□□ 0.29
Herc4-208ENSMUST00000219577 P3h3Q8CG70 732 aa16.87■□□□□ 0.29
Herc4-208ENSMUST00000219577 Fam71e1A1L3C1 212 aa16.87■□□□□ 0.29
Herc4-208ENSMUST00000219577 Wdr62Q3U3T8 1523 aa16.86■□□□□ 0.29
Herc4-208ENSMUST00000219577 LrpprcQ6PB66 1392 aaKnown RBP16.84■□□□□ 0.29
Herc4-208ENSMUST00000219577 Grin2bQ01097 1482 aa16.84■□□□□ 0.29
Herc4-208ENSMUST00000219577 NrdcQ8BHG1 1161 aa16.83■□□□□ 0.28
Herc4-208ENSMUST00000219577 Mroh2bQ7M6Y6 1581 aa16.82■□□□□ 0.28
Herc4-208ENSMUST00000219577 Ccer2J3QPU5 274 aa16.82■□□□□ 0.28
Herc4-208ENSMUST00000219577 Mrs2Q5NCE8 434 aa16.82■□□□□ 0.28
Herc4-208ENSMUST00000219577 Camsap1A2AHC3 1581 aa16.82■□□□□ 0.28
Herc4-208ENSMUST00000219577 Phldb1Q6PDH0 1371 aaKnown RBP16.82■□□□□ 0.28
Herc4-208ENSMUST00000219577 Carmil1Q6EDY6 1374 aa16.81■□□□□ 0.28
Herc4-208ENSMUST00000219577 Rad54l2Q99NG0 1466 aa16.81■□□□□ 0.28
Herc4-208ENSMUST00000219577 CntlnA2AM05 1397 aa16.81■□□□□ 0.28
Herc4-208ENSMUST00000219577 Cabp1Q9JLK7 227 aa16.79■□□□□ 0.28
Herc4-208ENSMUST00000219577 Calr4Q3TQS0 420 aa16.78■□□□□ 0.28
Herc4-208ENSMUST00000219577 Tiam1Q60610 1591 aa16.77■□□□□ 0.28
Herc4-208ENSMUST00000219577 Rgl3Q3UYI5 709 aa16.77■□□□□ 0.28
Herc4-208ENSMUST00000219577 Fyco1Q8VDC1 1437 aa16.76■□□□□ 0.27
Herc4-208ENSMUST00000219577 Wwc2Q6NXJ0 1187 aa16.76■□□□□ 0.27
Herc4-208ENSMUST00000219577 Lamc3Q9R0B6 1581 aa16.76■□□□□ 0.27
Herc4-208ENSMUST00000219577 Arhgap27A2AB59 869 aa16.76■□□□□ 0.27
Herc4-208ENSMUST00000219577 Ccnb3Q810T2 1396 aa16.75■□□□□ 0.27
Herc4-208ENSMUST00000219577 Dhx29Q6PGC1 1365 aaKnown RBP16.75■□□□□ 0.27
Herc4-208ENSMUST00000219577 Gm13697A2AK42 830 aa16.75■□□□□ 0.27
Herc4-208ENSMUST00000219577 Ifnlr1Q8CGK5 535 aa16.75■□□□□ 0.27
Herc4-208ENSMUST00000219577 Zfp644E9QA22 1323 aa16.74■□□□□ 0.27
Herc4-208ENSMUST00000219577 Rpap1Q80TE0 1409 aa16.74■□□□□ 0.27
Herc4-208ENSMUST00000219577 Eif4g1Q6NZJ6 1600 aaKnown RBP16.73■□□□□ 0.27
Herc4-208ENSMUST00000219577 TnnQ80Z71 1560 aa16.73■□□□□ 0.27
Herc4-208ENSMUST00000219577 Cux1P53564 1515 aa16.73■□□□□ 0.27
Herc4-208ENSMUST00000219577 Kif27Q7M6Z4 1394 aa16.72■□□□□ 0.27
Herc4-208ENSMUST00000219577 Mia2Q91ZV0 1396 aa16.72■□□□□ 0.27
Herc4-208ENSMUST00000219577 Slx4Q6P1D7 1565 aa16.72■□□□□ 0.27
Herc4-208ENSMUST00000219577 Duox2A2AQ99 1517 aa16.72■□□□□ 0.27
Herc4-208ENSMUST00000219577 Pcf11G3X9Z4 1553 aa16.71■□□□□ 0.27
Herc4-208ENSMUST00000219577 Mphosph9A6H5Y1 991 aa16.71■□□□□ 0.27
Herc4-208ENSMUST00000219577 Grwd1Q810D6 446 aaKnown RBP16.7■□□□□ 0.26
Herc4-208ENSMUST00000219577 Map3k1P53349 1493 aa16.7■□□□□ 0.26
Herc4-208ENSMUST00000219577 3425401B19RikD3Z1D3 1412 aa16.7■□□□□ 0.26
Herc4-208ENSMUST00000219577 Pkd2O35245 966 aa16.68■□□□□ 0.26
Herc4-208ENSMUST00000219577 Ppp4r2Q0VGB7 417 aa16.68■□□□□ 0.26
Herc4-208ENSMUST00000219577 Ankrd26Q811D2 1581 aa16.67■□□□□ 0.26
Herc4-208ENSMUST00000219577 Efcab5A0JP43 1406 aa16.67■□□□□ 0.26
Herc4-208ENSMUST00000219577 Znf710Q3U288 666 aa16.66■□□□□ 0.26
Herc4-208ENSMUST00000219577 Anp32aO35381 247 aa16.65■□□□□ 0.26
Herc4-208ENSMUST00000219577 PogzQ8BZH4 1409 aaKnown RBP16.62■□□□□ 0.25
Herc4-208ENSMUST00000219577 Prdm10Q3UTQ7 1184 aa16.59■□□□□ 0.25
Herc4-208ENSMUST00000219577 Exoc6Q8R313 802 aa16.58■□□□□ 0.25
Herc4-208ENSMUST00000219577 Ttbk1Q6PCN3 1308 aa16.58■□□□□ 0.25
Herc4-208ENSMUST00000219577 Fhad1A6PWD2 1420 aa16.57■□□□□ 0.24
Herc4-208ENSMUST00000219577 Gm7298A0A0N4SVU1 1476 aa16.56■□□□□ 0.24
Herc4-208ENSMUST00000219577 Slc4a3P16283 1227 aa16.56■□□□□ 0.24
Herc4-208ENSMUST00000219577 Kdm5bQ80Y84 1544 aa16.56■□□□□ 0.24
Herc4-208ENSMUST00000219577 Nolc1E9Q5C9 702 aaKnown RBP16.55■□□□□ 0.24
Herc4-208ENSMUST00000219577 Trak1Q6PD31 939 aa16.55■□□□□ 0.24
Herc4-208ENSMUST00000219577 Erich6D3Z6S9 713 aa16.55■□□□□ 0.24
Herc4-208ENSMUST00000219577 Dnajc5bQ9CQ94 199 aa16.55■□□□□ 0.24
Herc4-208ENSMUST00000219577 Mtus2Q3UHD3 1353 aa16.52■□□□□ 0.23
Herc4-208ENSMUST00000219577 Rad21Q61550 635 aaKnown RBP16.52■□□□□ 0.23
Herc4-208ENSMUST00000219577 A2mQ6GQT1 1474 aa16.52■□□□□ 0.23
Herc4-208ENSMUST00000219577 Usp47Q8BY87 1376 aa16.52■□□□□ 0.23
Herc4-208ENSMUST00000219577 WrnO09053 1401 aa16.51■□□□□ 0.23
Herc4-208ENSMUST00000219577 Smg6P61406 1418 aaKnown RBP16.51■□□□□ 0.23
Herc4-208ENSMUST00000219577 TchhA0A0B4J1F9 1599 aa16.51■□□□□ 0.23
Herc4-208ENSMUST00000219577 Vps8Q0P5W1 1427 aa16.5■□□□□ 0.23
Herc4-208ENSMUST00000219577 Naip2Q9QUK4 1447 aa16.49■□□□□ 0.23
Herc4-208ENSMUST00000219577 Rundc1Q0VDN7 615 aa16.48■□□□□ 0.23
Herc4-208ENSMUST00000219577 Os9Q8K2C7 672 aa16.48■□□□□ 0.23
Herc4-208ENSMUST00000219577 Wdr43Q6ZQL4 677 aaKnown RBP16.48■□□□□ 0.23
Herc4-208ENSMUST00000219577 Gm1043A0A140LJC2 1431 aa16.47■□□□□ 0.23
Herc4-208ENSMUST00000219577 Card11Q8CIS0 1159 aa16.46■□□□□ 0.23
Herc4-208ENSMUST00000219577 CadpsQ80TJ1 1355 aa16.46■□□□□ 0.23
Herc4-208ENSMUST00000219577 Urb2E9Q7L1 1524 aaKnown RBP16.46■□□□□ 0.22
Herc4-208ENSMUST00000219577 EprsQ8CGC7 1512 aaKnown RBP16.45■□□□□ 0.22
Herc4-208ENSMUST00000219577 Ankrd36D3Z4K0 1415 aa16.44■□□□□ 0.22
Herc4-208ENSMUST00000219577 Ofd1Q80Z25 1017 aa16.44■□□□□ 0.22
Herc4-208ENSMUST00000219577 Rrp7aQ9D1C9 280 aaKnown RBP16.43■□□□□ 0.22
Herc4-208ENSMUST00000219577 Unc13aQ4KUS2 1712 aa16.43■□□□□ 0.22
Herc4-208ENSMUST00000219577 UacaQ8CGB3 1411 aa16.42■□□□□ 0.22
Herc4-208ENSMUST00000219577 Pelp1Q9DBD5 1123 aaKnown RBP16.42■□□□□ 0.22
Herc4-208ENSMUST00000219577 Slc4a2P13808 1237 aaKnown RBP16.42■□□□□ 0.22
Herc4-208ENSMUST00000219577 Samd9lQ69Z37 1561 aa16.42■□□□□ 0.22
Herc4-208ENSMUST00000219577 SynmQ70IV5 1561 aa16.41■□□□□ 0.22
Herc4-208ENSMUST00000219577 Myt1Q8CFC2 1127 aa16.39■□□□□ 0.21
Herc4-208ENSMUST00000219577 Map4P27546 1125 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms