RNA–Protein interactions for RNA: ENSMUST00000190449.1

Msh4-205, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh4, Length 3,110 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-205ENSMUST00000190449 Frmpd1A2AKB4 1549 aa12.44□□□□□ -0.42
Msh4-205ENSMUST00000190449 Lmo7E9PYF4 1699 aaKnown RBP12.44□□□□□ -0.42
Msh4-205ENSMUST00000190449 Pcf11G3X9Z4 1553 aa12.43□□□□□ -0.42
Msh4-205ENSMUST00000190449 Mroh2bQ7M6Y6 1581 aa12.43□□□□□ -0.42
Msh4-205ENSMUST00000190449 Hnrnpul2Q00PI9 745 aaKnown RBP12.42□□□□□ -0.42
Msh4-205ENSMUST00000190449 Slx4Q6P1D7 1565 aa12.42□□□□□ -0.42
Msh4-205ENSMUST00000190449 Gm38655A0A286YDK6 273 aa12.42□□□□□ -0.42
Msh4-205ENSMUST00000190449 Peg3Q3URU2 1571 aa12.42□□□□□ -0.42
Msh4-205ENSMUST00000190449 Unc13aQ4KUS2 1712 aa12.42□□□□□ -0.42
Msh4-205ENSMUST00000190449 Ankrd36D3Z4K0 1415 aa12.41□□□□□ -0.42
Msh4-205ENSMUST00000190449 Grin2bQ01097 1482 aa12.4□□□□□ -0.42
Msh4-205ENSMUST00000190449 Camsap2Q8C1B1 1461 aa12.39□□□□□ -0.43
Msh4-205ENSMUST00000190449 Eid3Q3V124 375 aa12.39□□□□□ -0.43
Msh4-205ENSMUST00000190449 Stra8P70278 393 aa12.37□□□□□ -0.43
Msh4-205ENSMUST00000190449 Znf710Q3U288 666 aa12.36□□□□□ -0.43
Msh4-205ENSMUST00000190449 Fhad1A6PWD2 1420 aa12.36□□□□□ -0.43
Msh4-205ENSMUST00000190449 BlmO88700 1416 aa12.34□□□□□ -0.43
Msh4-205ENSMUST00000190449 Crocc2F6XLV1 1638 aa12.33□□□□□ -0.43
Msh4-205ENSMUST00000190449 Fam71e1A1L3C1 212 aa12.33□□□□□ -0.44
Msh4-205ENSMUST00000190449 Kif15Q6P9L6 1387 aa12.32□□□□□ -0.44
Msh4-205ENSMUST00000190449 Vps8Q0P5W1 1427 aa12.32□□□□□ -0.44
Msh4-205ENSMUST00000190449 CntlnA2AM05 1397 aa12.32□□□□□ -0.44
Msh4-205ENSMUST00000190449 SafbD3YXK2 937 aaKnown RBP12.32□□□□□ -0.44
Msh4-205ENSMUST00000190449 Mia2Q91ZV0 1396 aa12.31□□□□□ -0.44
Msh4-205ENSMUST00000190449 3425401B19RikD3Z1D3 1412 aa12.31□□□□□ -0.44
Msh4-205ENSMUST00000190449 Gm13697A2AK42 830 aa12.31□□□□□ -0.44
Msh4-205ENSMUST00000190449 Ccer2J3QPU5 274 aa12.31□□□□□ -0.44
Msh4-205ENSMUST00000190449 Ap3b1Q9Z1T1 1105 aa12.31□□□□□ -0.44
Msh4-205ENSMUST00000190449 Cul7Q8VE73 1689 aa12.3□□□□□ -0.44
Msh4-205ENSMUST00000190449 Fyco1Q8VDC1 1437 aa12.28□□□□□ -0.44
Msh4-205ENSMUST00000190449 Efcab5A0JP43 1406 aa12.28□□□□□ -0.44
Msh4-205ENSMUST00000190449 Ncoa2Q61026 1462 aa12.28□□□□□ -0.44
Msh4-205ENSMUST00000190449 Cux1P53564 1515 aa12.27□□□□□ -0.44
Msh4-205ENSMUST00000190449 Fhod3Q76LL6 1578 aa12.27□□□□□ -0.45
Msh4-205ENSMUST00000190449 Dhx29Q6PGC1 1365 aaKnown RBP12.27□□□□□ -0.45
Msh4-205ENSMUST00000190449 Anp32aO35381 247 aa12.26□□□□□ -0.45
Msh4-205ENSMUST00000190449 Urb2E9Q7L1 1524 aaKnown RBP12.26□□□□□ -0.45
Msh4-205ENSMUST00000190449 Carmil1Q6EDY6 1374 aa12.25□□□□□ -0.45
Msh4-205ENSMUST00000190449 Naip2Q9QUK4 1447 aa12.24□□□□□ -0.45
Msh4-205ENSMUST00000190449 NclP09405 707 aaKnown RBP12.24□□□□□ -0.45
Msh4-205ENSMUST00000190449 Ercc6F8VPZ5 1481 aa12.24□□□□□ -0.45
Msh4-205ENSMUST00000190449 Mapk8ip2Q9ERE9 830 aa12.23□□□□□ -0.45
Msh4-205ENSMUST00000190449 Naip5Q9R016 1403 aa12.2□□□□□ -0.46
Msh4-205ENSMUST00000190449 Pprc1Q6NZN1 1644 aa12.2□□□□□ -0.46
Msh4-205ENSMUST00000190449 Gm1043A0A140LJC2 1431 aa12.2□□□□□ -0.46
Msh4-205ENSMUST00000190449 Smg6P61406 1418 aaKnown RBP12.2□□□□□ -0.46
Msh4-205ENSMUST00000190449 Gm7298A0A0N4SVU1 1476 aa12.19□□□□□ -0.46
Msh4-205ENSMUST00000190449 Polr1aO35134 1717 aaKnown RBP12.19□□□□□ -0.46
Msh4-205ENSMUST00000190449 Il27Q8K3I6 234 aa12.18□□□□□ -0.46
Msh4-205ENSMUST00000190449 Thoc2B1AZI6 1594 aaKnown RBP12.18□□□□□ -0.46
Msh4-205ENSMUST00000190449 Rtl5Q5DTT4 599 aa12.18□□□□□ -0.46
Msh4-205ENSMUST00000190449 Fam50aQ9WV03 339 aaKnown RBP12.17□□□□□ -0.46
Msh4-205ENSMUST00000190449 Kif21aQ9QXL2 1672 aa12.17□□□□□ -0.46
Msh4-205ENSMUST00000190449 Dennd4bQ3U1Y4 1499 aa12.17□□□□□ -0.46
Msh4-205ENSMUST00000190449 Hspa5P20029 655 aaKnown RBP12.17□□□□□ -0.46
Msh4-205ENSMUST00000190449 A2mQ6GQT1 1474 aa12.15□□□□□ -0.46
Msh4-205ENSMUST00000190449 Calr4Q3TQS0 420 aa12.15□□□□□ -0.47
Msh4-205ENSMUST00000190449 Setbp1Q9Z180 1582 aa12.14□□□□□ -0.47
Msh4-205ENSMUST00000190449 SynmQ70IV5 1561 aa12.14□□□□□ -0.47
Msh4-205ENSMUST00000190449 Lmtk2Q3TYD6 1471 aa12.14□□□□□ -0.47
Msh4-205ENSMUST00000190449 Gcc2Q8CHG3 1679 aa12.12□□□□□ -0.47
Msh4-205ENSMUST00000190449 PogzQ8BZH4 1409 aaKnown RBP12.11□□□□□ -0.47
Msh4-205ENSMUST00000190449 Washc2Q6PGL7 1334 aa12.11□□□□□ -0.47
Msh4-205ENSMUST00000190449 DiexfQ8BTT6 772 aaKnown RBP12.11□□□□□ -0.47
Msh4-205ENSMUST00000190449 Duox2A2AQ99 1517 aa12.1□□□□□ -0.47
Msh4-205ENSMUST00000190449 Bcl11aQ9QYE3 773 aa12.09□□□□□ -0.47
Msh4-205ENSMUST00000190449 Nolc1E9Q5C9 702 aaKnown RBP12.08□□□□□ -0.48
Msh4-205ENSMUST00000190449 Lmod2Q3UHZ5 550 aa12.07□□□□□ -0.48
Msh4-205ENSMUST00000190449 LrpprcQ6PB66 1392 aaKnown RBP12.07□□□□□ -0.48
Msh4-205ENSMUST00000190449 Cux2P70298 1426 aa12.07□□□□□ -0.48
Msh4-205ENSMUST00000190449 Aebp1Q640N1 1128 aa12.07□□□□□ -0.48
Msh4-205ENSMUST00000190449 Samd9lQ69Z37 1561 aa12.07□□□□□ -0.48
Msh4-205ENSMUST00000190449 Rfx7F8VPJ6 1459 aa12.06□□□□□ -0.48
Msh4-205ENSMUST00000190449 Ncoa1P70365 1447 aa12.04□□□□□ -0.48
Msh4-205ENSMUST00000190449 Abca5Q8K448 1642 aa12.04□□□□□ -0.48
Msh4-205ENSMUST00000190449 Phldb1Q6PDH0 1371 aaKnown RBP12.04□□□□□ -0.48
Msh4-205ENSMUST00000190449 Pelp1Q9DBD5 1123 aaKnown RBP12.02□□□□□ -0.48
Msh4-205ENSMUST00000190449 Ccnb3Q810T2 1396 aa12.02□□□□□ -0.49
Msh4-205ENSMUST00000190449 Supt16hQ920B9 1047 aa12.02□□□□□ -0.49
Msh4-205ENSMUST00000190449 Sin3aQ60520 1274 aaKnown RBP12.01□□□□□ -0.49
Msh4-205ENSMUST00000190449 Kif21bQ9QXL1 1668 aa12□□□□□ -0.49
Msh4-205ENSMUST00000190449 Disp1Q3TDN0 1521 aa12□□□□□ -0.49
Msh4-205ENSMUST00000190449 Lamc1P02468 1607 aaKnown RBP11.99□□□□□ -0.49
Msh4-205ENSMUST00000190449 Rprd2Q6NXI6 1469 aaKnown RBP11.99□□□□□ -0.49
Msh4-205ENSMUST00000190449 Mug1P28665 1476 aa11.98□□□□□ -0.49
Msh4-205ENSMUST00000190449 Gm13695A2AK44 830 aa11.97□□□□□ -0.49
Msh4-205ENSMUST00000190449 Gpatch8A2A6A1 1505 aa11.97□□□□□ -0.49
Msh4-205ENSMUST00000190449 NexmifQ5DTT1 1515 aa11.96□□□□□ -0.49
Msh4-205ENSMUST00000190449 Wdr43Q6ZQL4 677 aaKnown RBP11.96□□□□□ -0.49
Msh4-205ENSMUST00000190449 EprsQ8CGC7 1512 aaKnown RBP11.96□□□□□ -0.49
Msh4-205ENSMUST00000190449 Npm1Q61937 292 aaKnown RBP11.95□□□□□ -0.5
Msh4-205ENSMUST00000190449 Fam135aQ6NS59 1506 aa11.95□□□□□ -0.5
Msh4-205ENSMUST00000190449 Mphosph9A6H5Y1 991 aa11.95□□□□□ -0.5
Msh4-205ENSMUST00000190449 Arhgef12Q8R4H2 1543 aaKnown RBP11.94□□□□□ -0.5
Msh4-205ENSMUST00000190449 BC005561E9Q5E2 1589 aa11.94□□□□□ -0.5
Msh4-205ENSMUST00000190449 Pla2r1Q62028 1487 aa11.93□□□□□ -0.5
Msh4-205ENSMUST00000190449 Pik3c2gO70167 1506 aa11.92□□□□□ -0.5
Msh4-205ENSMUST00000190449 Slc4a2P13808 1237 aaKnown RBP11.92□□□□□ -0.5
Msh4-205ENSMUST00000190449 Rad54l2Q99NG0 1466 aa11.92□□□□□ -0.5
Msh4-205ENSMUST00000190449 Ift140E9PY46 1464 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms