RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Atp1b4Q99ME6 356 aa21.62■■□□□ 1.05
Ccdc71l-201ENSMUST00000172332 Kif15Q6P9L6 1387 aa21.61■■□□□ 1.05
Ccdc71l-201ENSMUST00000172332 P3h3Q8CG70 732 aa21.6■■□□□ 1.05
Ccdc71l-201ENSMUST00000172332 Rangap1P46061 589 aaKnown RBP21.55■■□□□ 1.04
Ccdc71l-201ENSMUST00000172332 Rgl3Q3UYI5 709 aa21.55■■□□□ 1.04
Ccdc71l-201ENSMUST00000172332 Gm13697A2AK42 830 aa21.53■■□□□ 1.04
Ccdc71l-201ENSMUST00000172332 Cecr2E9Q2Z1 1453 aa21.53■■□□□ 1.04
Ccdc71l-201ENSMUST00000172332 DiexfQ8BTT6 772 aaKnown RBP21.53■■□□□ 1.04
Ccdc71l-201ENSMUST00000172332 Wdr43Q6ZQL4 677 aaKnown RBP21.52■■□□□ 1.04
Ccdc71l-201ENSMUST00000172332 Eea1Q8BL66 1411 aa21.51■■□□□ 1.03
Ccdc71l-201ENSMUST00000172332 SafbD3YXK2 937 aaKnown RBP21.5■■□□□ 1.03
Ccdc71l-201ENSMUST00000172332 Fam71e1A1L3C1 212 aa21.47■■□□□ 1.03
Ccdc71l-201ENSMUST00000172332 Hspa5P20029 655 aaKnown RBP21.42■■□□□ 1.02
Ccdc71l-201ENSMUST00000172332 Grwd1Q810D6 446 aaKnown RBP21.41■■□□□ 1.02
Ccdc71l-201ENSMUST00000172332 Plppr3Q7TPB0 716 aa21.39■■□□□ 1.02
Ccdc71l-201ENSMUST00000172332 Ercc6F8VPZ5 1481 aa21.37■■□□□ 1.01
Ccdc71l-201ENSMUST00000172332 Pds5bQ4VA53 1446 aaKnown RBP21.33■■□□□ 1
Ccdc71l-201ENSMUST00000172332 Cep162Q6ZQ06 1403 aa21.3■■□□□ 1
Ccdc71l-201ENSMUST00000172332 Ofd1Q80Z25 1017 aa21.29■■□□□ 1
Ccdc71l-201ENSMUST00000172332 Sin3aQ60520 1274 aaKnown RBP21.27■□□□□ 0.99
Ccdc71l-201ENSMUST00000172332 Wwc2Q6NXJ0 1187 aa21.25■□□□□ 0.99
Ccdc71l-201ENSMUST00000172332 Gm13695A2AK44 830 aa21.25■□□□□ 0.99
Ccdc71l-201ENSMUST00000172332 Kdm2aP59997 1161 aa21.22■□□□□ 0.99
Ccdc71l-201ENSMUST00000172332 Arhgap27A2AB59 869 aa21.21■□□□□ 0.99
Ccdc71l-201ENSMUST00000172332 Trim26Q99PN3 545 aa21.2■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 Clstn2Q9ER65 966 aa21.18■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 Ccdc18Q640L5 1455 aa21.18■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 Upf2A2AT37 1269 aaKnown RBP21.17■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 4930567H17RikQ3V0K5 233 aa21.16■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 Apbb1Q9QXJ1 710 aa21.16■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 Card11Q8CIS0 1159 aa21.15■□□□□ 0.98
Ccdc71l-201ENSMUST00000172332 Slc4a3P16283 1227 aa21.13■□□□□ 0.97
Ccdc71l-201ENSMUST00000172332 CftrP26361 1476 aa21.13■□□□□ 0.97
Ccdc71l-201ENSMUST00000172332 Hdac5Q9Z2V6 1113 aa21.12■□□□□ 0.97
Ccdc71l-201ENSMUST00000172332 Rrp7aQ9D1C9 280 aaKnown RBP21.06■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Fmn1Q05860 1466 aa21.05■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Mroh3A0A1D5RM54 893 aa21.04■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 CanxP35564 591 aaKnown RBP21.04■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Trim30dE9PWL0 497 aa21.03■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Neurod2Q62414 383 aa21.03■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Aebp1Q640N1 1128 aa21.03■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Crybg2B7ZCC2 1516 aa21.02■□□□□ 0.96
Ccdc71l-201ENSMUST00000172332 Pkd2O35245 966 aa21.02■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Rapgef2Q8CHG7 1496 aa21■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Atad2bE9Q166 1460 aaKnown RBP21■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Mia2Q91ZV0 1396 aa21■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Mtus2Q3UHD3 1353 aa20.99■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Smarca2Q6DIC0 1577 aa20.99■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Cabp1Q9JLK7 227 aa20.97■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Cux2P70298 1426 aa20.96■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Cwc22Q8C5N3 908 aaKnown RBP20.96■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Dbr1Q923B1 550 aa20.96■□□□□ 0.95
Ccdc71l-201ENSMUST00000172332 Synj1Q8CHC4 1574 aa20.95■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Exoc6Q8R313 802 aa20.95■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Vsig10D3YX43 558 aa20.93■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Arid4bA2CG63 1314 aaKnown RBP20.91■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Kif27Q7M6Z4 1394 aa20.9■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 B4galnt3Q6L8S8 986 aa20.9■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Dnajc5bQ9CQ94 199 aa20.9■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Rundc1Q0VDN7 615 aa20.89■□□□□ 0.94
Ccdc71l-201ENSMUST00000172332 Gm20521D3Z5F7 333 aa20.89■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Trak1Q6PD31 939 aa20.89■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Phldb1Q6PDH0 1371 aaKnown RBP20.88■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Mphosph9A6H5Y1 991 aa20.87■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Hsp90aa1P07901 733 aaKnown RBP20.87■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Stk24Q99KH8 431 aa20.87■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Hsp90ab1P11499 724 aaKnown RBP20.86■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Cnga1P29974 684 aa20.85■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Srpk2O54781 681 aaKnown RBP20.85■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Map4P27546 1125 aaKnown RBP20.84■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Ecm2Q5FW85 670 aa20.83■□□□□ 0.93
Ccdc71l-201ENSMUST00000172332 Baz1bQ9Z277 1479 aa20.83■□□□□ 0.92
Ccdc71l-201ENSMUST00000172332 Armcx1Q9CX83 456 aa20.82■□□□□ 0.92
Ccdc71l-201ENSMUST00000172332 DekQ7TNV0 380 aaKnown RBP20.81■□□□□ 0.92
Ccdc71l-201ENSMUST00000172332 Smarca4Q3TKT4 1613 aaKnown RBP20.79■□□□□ 0.92
Ccdc71l-201ENSMUST00000172332 Irx6Q9ER75 438 aa20.78■□□□□ 0.92
Ccdc71l-201ENSMUST00000172332 Supt16hQ920B9 1047 aa20.75■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 Fyco1Q8VDC1 1437 aa20.75■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 Exosc9Q9JHI7 438 aaKnown RBP20.75■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 Fgd1P52734 960 aa20.73■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 Rpap1Q80TE0 1409 aa20.73■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 Ifit1bl1D3Z6F0 470 aa20.73■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 Ccdc27Q3V036 639 aa20.71■□□□□ 0.91
Ccdc71l-201ENSMUST00000172332 CntlnA2AM05 1397 aa20.7■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 IqubQ8CDK3 788 aa20.7■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Arid3cA6PWV5 409 aa20.68■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Arhgap35Q91YM2 1499 aa20.68■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 BicraF8VPZ9 1578 aa20.67■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Gm6268A2A3U9 297 aa20.67■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Iqgap2Q3UQ44 1575 aa20.66■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Nolc1E9Q5C9 702 aaKnown RBP20.66■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Spryd3E9Q9B3 442 aa20.65■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Stag3O70576 1240 aa20.65■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Safb2Q80YR5 991 aaKnown RBP20.65■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Ythdc1E9Q5K9 736 aaKnown RBP20.64■□□□□ 0.9
Ccdc71l-201ENSMUST00000172332 Zscan21Q07231 555 aa20.64■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 Tcerg1Q8CGF7 1100 aaKnown RBP20.64■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 1700019A02RikA0A087WPV9 146 aa20.61■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 Speer4f1Q9D5Q6 258 aa20.61■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 Chmp5Q9D7S9 219 aa20.61■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms