RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 PtprkP35822 1457 aa13.52□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Rad54l2Q99NG0 1466 aa13.52□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Ccer2J3QPU5 274 aa13.5□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Cdk11bP24788 784 aaKnown RBP13.5□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Arid3cA6PWV5 409 aa13.48□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Kif27Q7M6Z4 1394 aa13.47□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Top2aQ01320 1528 aaKnown RBP13.47□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Mrc2Q64449 1479 aa13.47□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Top2bQ64511 1612 aa13.46□□□□□ -0.25
Ggps1-201ENSMUST00000170957 Duox2A2AQ99 1517 aa13.45□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Carmil1Q6EDY6 1374 aa13.45□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Urb2E9Q7L1 1524 aaKnown RBP13.45□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Shroom4Q1W617 1475 aa13.41□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Gm13697A2AK42 830 aa13.41□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Efcab5A0JP43 1406 aa13.4□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Stra8P70278 393 aa13.4□□□□□ -0.26
Ggps1-201ENSMUST00000170957 Grin2bQ01097 1482 aa13.39□□□□□ -0.27
Ggps1-201ENSMUST00000170957 PogzQ8BZH4 1409 aaKnown RBP13.39□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Plb1Q3TTY0 1478 aa13.37□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Arhgap35Q91YM2 1499 aa13.37□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Sall2Q9QX96 1004 aa13.37□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Camsap1A2AHC3 1581 aa13.35□□□□□ -0.27
Ggps1-201ENSMUST00000170957 NrkQ9R0G8 1455 aa13.35□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Rrp7aQ9D1C9 280 aaKnown RBP13.34□□□□□ -0.27
Ggps1-201ENSMUST00000170957 WrnO09053 1401 aa13.34□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Prdm10Q3UTQ7 1184 aa13.34□□□□□ -0.27
Ggps1-201ENSMUST00000170957 Hdac5Q9Z2V6 1113 aa13.34□□□□□ -0.27
Ggps1-201ENSMUST00000170957 CntlnA2AM05 1397 aa13.33□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Atp1b4Q99ME6 356 aa13.33□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Lamc3Q9R0B6 1581 aa13.32□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Cabp1Q9JLK7 227 aa13.31□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Aebp2Q9Z248 504 aaKnown RBP13.31□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Clstn2Q9ER65 966 aa13.31□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Anp32bQ9EST5 272 aaKnown RBP13.29□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Rgl3Q3UYI5 709 aa13.29□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Nop58Q6DFW4 536 aaKnown RBP13.28□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Fyco1Q8VDC1 1437 aa13.28□□□□□ -0.28
Ggps1-201ENSMUST00000170957 Mtus2Q3UHD3 1353 aa13.27□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Ppp1r18Q8BQ30 594 aa13.26□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Hspa5P20029 655 aaKnown RBP13.25□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Mroh2bQ7M6Y6 1581 aa13.25□□□□□ -0.29
Ggps1-201ENSMUST00000170957 ClspnQ80YR7 1315 aa13.24□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Ccnb3Q810T2 1396 aa13.23□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Mia2Q91ZV0 1396 aa13.23□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Jph4Q80WT0 628 aa13.23□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Grwd1Q810D6 446 aaKnown RBP13.22□□□□□ -0.29
Ggps1-201ENSMUST00000170957 Pabpn1Q8CCS6 302 aaKnown RBP13.21□□□□□ -0.29
Ggps1-201ENSMUST00000170957 NrdcQ8BHG1 1161 aa13.21□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Map3k1P53349 1493 aa13.2□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Thoc2B1AZI6 1594 aaKnown RBP13.2□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Arap1Q4LDD4 1452 aa13.2□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Soga1E1U8D0 1418 aa13.19□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Polr1aO35134 1717 aaKnown RBP13.19□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Gm13695A2AK44 830 aa13.18□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Crocc2F6XLV1 1638 aa13.18□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Dhx57Q6P5D3 1388 aaKnown RBP13.18□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Fam135aQ6NS59 1506 aa13.17□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Eif5bQ05D44 1216 aaKnown RBP13.16□□□□□ -0.3
Ggps1-201ENSMUST00000170957 EprsQ8CGC7 1512 aaKnown RBP13.15□□□□□ -0.3
Ggps1-201ENSMUST00000170957 Safb2Q80YR5 991 aaKnown RBP13.15□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Gm7298A0A0N4SVU1 1476 aa13.14□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Kdm2aP59997 1161 aa13.14□□□□□ -0.31
Ggps1-201ENSMUST00000170957 CadpsQ80TJ1 1355 aa13.14□□□□□ -0.31
Ggps1-201ENSMUST00000170957 P3h3Q8CG70 732 aa13.14□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Ift140E9PY46 1464 aa13.13□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Trak1Q6PD31 939 aa13.13□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Naip1Q9QWK5 1403 aa13.13□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Sart1Q9Z315 806 aaKnown RBP13.13□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Map4P27546 1125 aaKnown RBP13.12□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Tdrd9Q14BI7 1383 aa13.12□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Pkd2O35245 966 aa13.11□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Stk24Q99KH8 431 aa13.11□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Grin2aP35436 1464 aa13.09□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Arhgap31A6X8Z5 1425 aa13.09□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Lemd3Q9WU40 921 aa13.09□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Cc2d2bA0A286YDU8 1405 aa13.08□□□□□ -0.31
Ggps1-201ENSMUST00000170957 Mphosph9A6H5Y1 991 aa13.08□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Cux1P53564 1515 aa13.08□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Fgd6Q69ZL1 1399 aa13.07□□□□□ -0.32
Ggps1-201ENSMUST00000170957 SynmQ70IV5 1561 aa13.06□□□□□ -0.32
Ggps1-201ENSMUST00000170957 TnnQ80Z71 1560 aa13.06□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Mroh3A0A1D5RM54 893 aa13.06□□□□□ -0.32
Ggps1-201ENSMUST00000170957 AqrQ8CFQ3 1481 aaKnown RBP13.06□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Zfp644E9QA22 1323 aa13.06□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Kif3bQ61771 747 aa13.05□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Sin3aQ60520 1274 aaKnown RBP13.04□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Kif21aQ9QXL2 1672 aa13.04□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Ncoa2Q61026 1462 aa13.03□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Samd9lQ69Z37 1561 aa13.02□□□□□ -0.32
Ggps1-201ENSMUST00000170957 Neo1P97798 1493 aa13.02□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Arhgef5E9Q7D5 1581 aa13.02□□□□□ -0.33
Ggps1-201ENSMUST00000170957 MyclP10166 368 aa13.02□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Disp1Q3TDN0 1521 aa13.01□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Plekhh2Q8C115 1491 aa13.01□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Tnnt3Q9QZ47 272 aa12.99□□□□□ -0.33
Ggps1-201ENSMUST00000170957 UacaQ8CGB3 1411 aa12.98□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Gm14025A2AP89 1413 aa12.96□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Card11Q8CIS0 1159 aa12.96□□□□□ -0.33
Ggps1-201ENSMUST00000170957 Nup155Q99P88 1391 aaKnown RBP12.96□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Pcf11G3X9Z4 1553 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms