RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 Hnrnpul2Q00PI9 745 aaKnown RBP17.5■□□□□ 0.39
Lig1-210ENSMUST00000165964 Tnnt3Q9QZ47 272 aa17.49■□□□□ 0.39
Lig1-210ENSMUST00000165964 Camsap1A2AHC3 1581 aa17.49■□□□□ 0.39
Lig1-210ENSMUST00000165964 AqrQ8CFQ3 1481 aaKnown RBP17.48■□□□□ 0.39
Lig1-210ENSMUST00000165964 Mroh2bQ7M6Y6 1581 aa17.45■□□□□ 0.38
Lig1-210ENSMUST00000165964 Grin2bQ01097 1482 aa17.42■□□□□ 0.38
Lig1-210ENSMUST00000165964 Rpap1Q80TE0 1409 aa17.41■□□□□ 0.38
Lig1-210ENSMUST00000165964 Ankrd26Q811D2 1581 aa17.41■□□□□ 0.38
Lig1-210ENSMUST00000165964 Mapk8ip2Q9ERE9 830 aa17.41■□□□□ 0.38
Lig1-210ENSMUST00000165964 SafbD3YXK2 937 aaKnown RBP17.4■□□□□ 0.38
Lig1-210ENSMUST00000165964 Fam50aQ9WV03 339 aaKnown RBP17.4■□□□□ 0.38
Lig1-210ENSMUST00000165964 Erich3F6QRE9 1637 aa17.4■□□□□ 0.38
Lig1-210ENSMUST00000165964 NclP09405 707 aaKnown RBP17.38■□□□□ 0.37
Lig1-210ENSMUST00000165964 Slx4Q6P1D7 1565 aa17.36■□□□□ 0.37
Lig1-210ENSMUST00000165964 Pcf11G3X9Z4 1553 aa17.35■□□□□ 0.37
Lig1-210ENSMUST00000165964 Znf710Q3U288 666 aa17.33■□□□□ 0.37
Lig1-210ENSMUST00000165964 UacaQ8CGB3 1411 aa17.33■□□□□ 0.36
Lig1-210ENSMUST00000165964 Lmod2Q3UHZ5 550 aa17.33■□□□□ 0.36
Lig1-210ENSMUST00000165964 3425401B19RikD3Z1D3 1412 aa17.33■□□□□ 0.36
Lig1-210ENSMUST00000165964 CntlnA2AM05 1397 aa17.32■□□□□ 0.36
Lig1-210ENSMUST00000165964 Fam71e1A1L3C1 212 aa17.28■□□□□ 0.36
Lig1-210ENSMUST00000165964 Ccer2J3QPU5 274 aa17.28■□□□□ 0.36
Lig1-210ENSMUST00000165964 Hspa5P20029 655 aaKnown RBP17.28■□□□□ 0.36
Lig1-210ENSMUST00000165964 Stra8P70278 393 aa17.28■□□□□ 0.36
Lig1-210ENSMUST00000165964 Ercc6F8VPZ5 1481 aa17.28■□□□□ 0.36
Lig1-210ENSMUST00000165964 Fhad1A6PWD2 1420 aa17.28■□□□□ 0.36
Lig1-210ENSMUST00000165964 Gm13697A2AK42 830 aa17.27■□□□□ 0.36
Lig1-210ENSMUST00000165964 Ankrd36D3Z4K0 1415 aa17.27■□□□□ 0.36
Lig1-210ENSMUST00000165964 Lmo7E9PYF4 1699 aaKnown RBP17.26■□□□□ 0.35
Lig1-210ENSMUST00000165964 Carmil1Q6EDY6 1374 aa17.26■□□□□ 0.35
Lig1-210ENSMUST00000165964 Mia2Q91ZV0 1396 aa17.26■□□□□ 0.35
Lig1-210ENSMUST00000165964 Unc13aQ4KUS2 1712 aa17.25■□□□□ 0.35
Lig1-210ENSMUST00000165964 Dhx29Q6PGC1 1365 aaKnown RBP17.25■□□□□ 0.35
Lig1-210ENSMUST00000165964 Cux1P53564 1515 aa17.25■□□□□ 0.35
Lig1-210ENSMUST00000165964 Fyco1Q8VDC1 1437 aa17.23■□□□□ 0.35
Lig1-210ENSMUST00000165964 Efcab5A0JP43 1406 aa17.21■□□□□ 0.35
Lig1-210ENSMUST00000165964 Vps8Q0P5W1 1427 aa17.21■□□□□ 0.35
Lig1-210ENSMUST00000165964 Naip2Q9QUK4 1447 aa17.17■□□□□ 0.34
Lig1-210ENSMUST00000165964 Aebp1Q640N1 1128 aa17.16■□□□□ 0.34
Lig1-210ENSMUST00000165964 Urb2E9Q7L1 1524 aaKnown RBP17.15■□□□□ 0.34
Lig1-210ENSMUST00000165964 Peg3Q3URU2 1571 aa17.15■□□□□ 0.34
Lig1-210ENSMUST00000165964 Cux2P70298 1426 aa17.15■□□□□ 0.34
Lig1-210ENSMUST00000165964 Npm1Q61937 292 aaKnown RBP17.14■□□□□ 0.33
Lig1-210ENSMUST00000165964 Gm1043A0A140LJC2 1431 aa17.13■□□□□ 0.33
Lig1-210ENSMUST00000165964 Gm7298A0A0N4SVU1 1476 aa17.13■□□□□ 0.33
Lig1-210ENSMUST00000165964 Anp32aO35381 247 aa17.12■□□□□ 0.33
Lig1-210ENSMUST00000165964 Camsap2Q8C1B1 1461 aa17.11■□□□□ 0.33
Lig1-210ENSMUST00000165964 LrpprcQ6PB66 1392 aaKnown RBP17.11■□□□□ 0.33
Lig1-210ENSMUST00000165964 Crocc2F6XLV1 1638 aa17.1■□□□□ 0.33
Lig1-210ENSMUST00000165964 Sin3aQ60520 1274 aaKnown RBP17.1■□□□□ 0.33
Lig1-210ENSMUST00000165964 Duox2A2AQ99 1517 aa17.09■□□□□ 0.33
Lig1-210ENSMUST00000165964 PogzQ8BZH4 1409 aaKnown RBP17.08■□□□□ 0.33
Lig1-210ENSMUST00000165964 Phldb1Q6PDH0 1371 aaKnown RBP17.08■□□□□ 0.33
Lig1-210ENSMUST00000165964 Smg6P61406 1418 aaKnown RBP17.08■□□□□ 0.32
Lig1-210ENSMUST00000165964 Naip5Q9R016 1403 aa17.07■□□□□ 0.32
Lig1-210ENSMUST00000165964 Calr4Q3TQS0 420 aa17.06■□□□□ 0.32
Lig1-210ENSMUST00000165964 A2mQ6GQT1 1474 aa17.06■□□□□ 0.32
Lig1-210ENSMUST00000165964 Thoc2B1AZI6 1594 aaKnown RBP17.06■□□□□ 0.32
Lig1-210ENSMUST00000165964 Ncoa2Q61026 1462 aa17.05■□□□□ 0.32
Lig1-210ENSMUST00000165964 Dennd4bQ3U1Y4 1499 aa17.04■□□□□ 0.32
Lig1-210ENSMUST00000165964 Ubl4bQ9CQ84 188 aa17.03■□□□□ 0.32
Lig1-210ENSMUST00000165964 Ube2uB1AUC4 352 aa17.03■□□□□ 0.32
Lig1-210ENSMUST00000165964 Chic2Q9D9G3 165 aa17.01■□□□□ 0.31
Lig1-210ENSMUST00000165964 SynmQ70IV5 1561 aa17■□□□□ 0.31
Lig1-210ENSMUST00000165964 Ccnb3Q810T2 1396 aa16.99■□□□□ 0.31
Lig1-210ENSMUST00000165964 Nolc1E9Q5C9 702 aaKnown RBP16.99■□□□□ 0.31
Lig1-210ENSMUST00000165964 Slc24a1Q91WD8 1130 aa16.97■□□□□ 0.31
Lig1-210ENSMUST00000165964 Polr1aO35134 1717 aaKnown RBP16.97■□□□□ 0.31
Lig1-210ENSMUST00000165964 Lmtk2Q3TYD6 1471 aa16.94■□□□□ 0.3
Lig1-210ENSMUST00000165964 Samd9lQ69Z37 1561 aa16.94■□□□□ 0.3
Lig1-210ENSMUST00000165964 Cul7Q8VE73 1689 aa16.93■□□□□ 0.3
Lig1-210ENSMUST00000165964 Rad54l2Q99NG0 1466 aa16.93■□□□□ 0.3
Lig1-210ENSMUST00000165964 Mphosph9A6H5Y1 991 aa16.92■□□□□ 0.3
Lig1-210ENSMUST00000165964 Fhod3Q76LL6 1578 aa16.91■□□□□ 0.3
Lig1-210ENSMUST00000165964 Washc2Q6PGL7 1334 aa16.89■□□□□ 0.3
Lig1-210ENSMUST00000165964 Dnajc5bQ9CQ94 199 aa16.87■□□□□ 0.29
Lig1-210ENSMUST00000165964 Gpatch8A2A6A1 1505 aa16.86■□□□□ 0.29
Lig1-210ENSMUST00000165964 EprsQ8CGC7 1512 aaKnown RBP16.85■□□□□ 0.29
Lig1-210ENSMUST00000165964 Pprc1Q6NZN1 1644 aa16.85■□□□□ 0.29
Lig1-210ENSMUST00000165964 Kif27Q7M6Z4 1394 aa16.85■□□□□ 0.29
Lig1-210ENSMUST00000165964 CadpsQ80TJ1 1355 aa16.85■□□□□ 0.29
Lig1-210ENSMUST00000165964 Mrs2Q5NCE8 434 aa16.84■□□□□ 0.29
Lig1-210ENSMUST00000165964 Fam135aQ6NS59 1506 aa16.83■□□□□ 0.29
Lig1-210ENSMUST00000165964 Supt16hQ920B9 1047 aa16.83■□□□□ 0.29
Lig1-210ENSMUST00000165964 Ncoa1P70365 1447 aa16.83■□□□□ 0.29
Lig1-210ENSMUST00000165964 Setbp1Q9Z180 1582 aa16.83■□□□□ 0.28
Lig1-210ENSMUST00000165964 Slc4a2P13808 1237 aaKnown RBP16.82■□□□□ 0.28
Lig1-210ENSMUST00000165964 Rtl5Q5DTT4 599 aa16.82■□□□□ 0.28
Lig1-210ENSMUST00000165964 Eif5bQ05D44 1216 aaKnown RBP16.81■□□□□ 0.28
Lig1-210ENSMUST00000165964 Gm13695A2AK44 830 aa16.8■□□□□ 0.28
Lig1-210ENSMUST00000165964 Cabp1Q9JLK7 227 aa16.8■□□□□ 0.28
Lig1-210ENSMUST00000165964 Rfx7F8VPJ6 1459 aa16.8■□□□□ 0.28
Lig1-210ENSMUST00000165964 Ppp4r2Q0VGB7 417 aa16.8■□□□□ 0.28
Lig1-210ENSMUST00000165964 Usp47Q8BY87 1376 aa16.8■□□□□ 0.28
Lig1-210ENSMUST00000165964 NexmifQ5DTT1 1515 aa16.79■□□□□ 0.28
Lig1-210ENSMUST00000165964 Pkd2O35245 966 aa16.79■□□□□ 0.28
Lig1-210ENSMUST00000165964 Wdr43Q6ZQL4 677 aaKnown RBP16.79■□□□□ 0.28
Lig1-210ENSMUST00000165964 Mug1P28665 1476 aa16.79■□□□□ 0.28
Lig1-210ENSMUST00000165964 Pla2r1Q62028 1487 aa16.79■□□□□ 0.28
Lig1-210ENSMUST00000165964 Wwc2Q6NXJ0 1187 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms