RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Map3k1P53349 1493 aa22.62■■□□□ 1.21
Ercc1-203ENSMUST00000160369 Carmil1Q6EDY6 1374 aa22.61■■□□□ 1.21
Ercc1-203ENSMUST00000160369 Col17a1Q07563 1470 aa22.6■■□□□ 1.21
Ercc1-203ENSMUST00000160369 Arhgap35Q91YM2 1499 aa22.58■■□□□ 1.2
Ercc1-203ENSMUST00000160369 EprsQ8CGC7 1512 aaKnown RBP22.57■■□□□ 1.2
Ercc1-203ENSMUST00000160369 TchhA0A0B4J1F9 1599 aa22.55■■□□□ 1.2
Ercc1-203ENSMUST00000160369 Cep162Q6ZQ06 1403 aa22.53■■□□□ 1.2
Ercc1-203ENSMUST00000160369 Zcchc11B2RX14 1644 aaKnown RBP22.53■■□□□ 1.2
Ercc1-203ENSMUST00000160369 Adamts12Q811B3 1600 aa22.53■■□□□ 1.2
Ercc1-203ENSMUST00000160369 AknaQ80VW7 1404 aa22.52■■□□□ 1.2
Ercc1-203ENSMUST00000160369 CadpsQ80TJ1 1355 aa22.5■■□□□ 1.19
Ercc1-203ENSMUST00000160369 Polr1aO35134 1717 aaKnown RBP22.5■■□□□ 1.19
Ercc1-203ENSMUST00000160369 WizO88286 1684 aaKnown RBP22.49■■□□□ 1.19
Ercc1-203ENSMUST00000160369 Arhgap27A2AB59 869 aa22.49■■□□□ 1.19
Ercc1-203ENSMUST00000160369 Abca16E9PWJ7 1678 aa22.48■■□□□ 1.19
Ercc1-203ENSMUST00000160369 Clip1Q922J3 1391 aa22.48■■□□□ 1.19
Ercc1-203ENSMUST00000160369 Eif4g1Q6NZJ6 1600 aaKnown RBP22.46■■□□□ 1.19
Ercc1-203ENSMUST00000160369 Abcc1O35379 1528 aa22.44■■□□□ 1.18
Ercc1-203ENSMUST00000160369 PxdnQ3UQ28 1475 aa22.44■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Rpap1Q80TE0 1409 aa22.44■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Dnmt1P13864 1620 aaKnown RBP22.43■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Abcc2Q8VI47 1543 aa22.42■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Map3k4O08648 1597 aa22.42■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Gapvd1Q6PAR5 1458 aa22.41■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Myt1lP97500 1187 aa22.4■■□□□ 1.18
Ercc1-203ENSMUST00000160369 Gm7298A0A0N4SVU1 1476 aa22.39■■□□□ 1.17
Ercc1-203ENSMUST00000160369 Soga1E1U8D0 1418 aa22.38■■□□□ 1.17
Ercc1-203ENSMUST00000160369 Neo1P97798 1493 aa22.36■■□□□ 1.17
Ercc1-203ENSMUST00000160369 Cep170Q6A065 1588 aa22.35■■□□□ 1.17
Ercc1-203ENSMUST00000160369 Gm14025A2AP89 1413 aa22.33■■□□□ 1.17
Ercc1-203ENSMUST00000160369 Adgrl3Q80TS3 1537 aa22.31■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Chd1P40201 1711 aa22.31■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Ythdc2B2RR83 1445 aaKnown RBP22.31■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Fyco1Q8VDC1 1437 aa22.31■■□□□ 1.16
Ercc1-203ENSMUST00000160369 BC005561E9Q5E2 1589 aa22.29■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Slx4Q6P1D7 1565 aa22.29■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Abca5Q8K448 1642 aa22.28■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Cux1P53564 1515 aa22.27■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Gm156Q58A37 223 aa22.27■■□□□ 1.16
Ercc1-203ENSMUST00000160369 Jph4Q80WT0 628 aa22.23■■□□□ 1.15
Ercc1-203ENSMUST00000160369 WrnO09053 1401 aa22.21■■□□□ 1.15
Ercc1-203ENSMUST00000160369 PtprtQ99M80 1454 aa22.19■■□□□ 1.14
Ercc1-203ENSMUST00000160369 Arhgef12Q8R4H2 1543 aaKnown RBP22.17■■□□□ 1.14
Ercc1-203ENSMUST00000160369 Ttbk1Q6PCN3 1308 aa22.13■■□□□ 1.13
Ercc1-203ENSMUST00000160369 Ankrd26Q811D2 1581 aa22.12■■□□□ 1.13
Ercc1-203ENSMUST00000160369 Arhgef5E9Q7D5 1581 aa22.12■■□□□ 1.13
Ercc1-203ENSMUST00000160369 Rrbp1Q99PL5 1605 aaKnown RBP22.11■■□□□ 1.13
Ercc1-203ENSMUST00000160369 AI481877A2ALV5 1481 aa22.09■■□□□ 1.13
Ercc1-203ENSMUST00000160369 Setd5Q5XJV7 1441 aa22.09■■□□□ 1.13
Ercc1-203ENSMUST00000160369 Eea1Q8BL66 1411 aa22.07■■□□□ 1.12
Ercc1-203ENSMUST00000160369 Aebp1Q640N1 1128 aa22.05■■□□□ 1.12
Ercc1-203ENSMUST00000160369 Igf1rQ60751 1373 aa22.04■■□□□ 1.12
Ercc1-203ENSMUST00000160369 Fkbp15Q6P9Q6 1216 aaKnown RBP22.02■■□□□ 1.12
Ercc1-203ENSMUST00000160369 Erich3F6QRE9 1637 aa22.01■■□□□ 1.11
Ercc1-203ENSMUST00000160369 Setbp1Q9Z180 1582 aa22■■□□□ 1.11
Ercc1-203ENSMUST00000160369 Arhgap31A6X8Z5 1425 aa22■■□□□ 1.11
Ercc1-203ENSMUST00000160369 Kdm5bQ80Y84 1544 aa22■■□□□ 1.11
Ercc1-203ENSMUST00000160369 Ccdc141E9Q8Q6 1531 aa21.97■■□□□ 1.11
Ercc1-203ENSMUST00000160369 Kif27Q7M6Z4 1394 aa21.97■■□□□ 1.11
Ercc1-203ENSMUST00000160369 Pprc1Q6NZN1 1644 aa21.96■■□□□ 1.11
Ercc1-203ENSMUST00000160369 BlmO88700 1416 aa21.94■■□□□ 1.1
Ercc1-203ENSMUST00000160369 Ncoa2Q61026 1462 aa21.94■■□□□ 1.1
Ercc1-203ENSMUST00000160369 Ifnlr1Q8CGK5 535 aa21.93■■□□□ 1.1
Ercc1-203ENSMUST00000160369 Lmo7E9PYF4 1699 aaKnown RBP21.92■■□□□ 1.1
Ercc1-203ENSMUST00000160369 Ak9G3UYQ4 1894 aa21.9■■□□□ 1.1
Ercc1-203ENSMUST00000160369 Rapgef6Q5NCJ1 1609 aa21.9■■□□□ 1.1
Ercc1-203ENSMUST00000160369 Ppp1r18Q8BQ30 594 aa21.88■■□□□ 1.09
Ercc1-203ENSMUST00000160369 Ap3b1Q9Z1T1 1105 aa21.88■■□□□ 1.09
Ercc1-203ENSMUST00000160369 Pcf11G3X9Z4 1553 aa21.87■■□□□ 1.09
Ercc1-203ENSMUST00000160369 CntlnA2AM05 1397 aa21.85■■□□□ 1.09
Ercc1-203ENSMUST00000160369 Wdr7Q920I9 1489 aa21.83■■□□□ 1.09
Ercc1-203ENSMUST00000160369 NhsB1AV60 1647 aa21.83■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Lrrc9Q8CDN9 1456 aa21.83■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Arap1Q4LDD4 1452 aa21.82■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Fancd2Q80V62 1450 aa21.79■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Arid3cA6PWV5 409 aa21.79■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Clasp1Q80TV8 1535 aaKnown RBP21.79■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Magi1Q6RHR9 1471 aa21.78■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Atp10dQ8K2X1 1416 aa21.78■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Mroh2aD3Z750 1679 aa21.78■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Kiaa1210E9Q0C6 1637 aa21.77■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Dhx57Q6P5D3 1388 aaKnown RBP21.77■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Cul7Q8VE73 1689 aa21.77■■□□□ 1.08
Ercc1-203ENSMUST00000160369 Gcc2Q8CHG3 1679 aa21.76■■□□□ 1.07
Ercc1-203ENSMUST00000160369 Arhgef11Q68FM7 1552 aa21.74■■□□□ 1.07
Ercc1-203ENSMUST00000160369 Fam163aQ8CAA5 168 aa21.74■■□□□ 1.07
Ercc1-203ENSMUST00000160369 Pcdh10E9PXQ7 1057 aa21.73■■□□□ 1.07
Ercc1-203ENSMUST00000160369 Znf608Q56A10 1511 aa21.72■■□□□ 1.07
Ercc1-203ENSMUST00000160369 Mug1P28665 1476 aa21.69■■□□□ 1.06
Ercc1-203ENSMUST00000160369 Peg3Q3URU2 1571 aa21.69■■□□□ 1.06
Ercc1-203ENSMUST00000160369 Ncoa3O09000 1398 aa21.68■■□□□ 1.06
Ercc1-203ENSMUST00000160369 Ttc37F8VPK0 1563 aa21.67■■□□□ 1.06
Ercc1-203ENSMUST00000160369 Abca8bQ8K440 1620 aa21.66■■□□□ 1.06
Ercc1-203ENSMUST00000160369 Naip1Q9QWK5 1403 aa21.65■■□□□ 1.06
Ercc1-203ENSMUST00000160369 Prex2Q3LAC4 1598 aa21.63■■□□□ 1.05
Ercc1-203ENSMUST00000160369 Tiam1Q60610 1591 aa21.63■■□□□ 1.05
Ercc1-203ENSMUST00000160369 Lmod2Q3UHZ5 550 aa21.63■■□□□ 1.05
Ercc1-203ENSMUST00000160369 Zfyve16Q80U44 1528 aa21.63■■□□□ 1.05
Ercc1-203ENSMUST00000160369 AdgbG3UZ78 1657 aa21.62■■□□□ 1.05
Ercc1-203ENSMUST00000160369 Gm1043A0A140LJC2 1431 aa21.62■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms