RNA–Protein interactions for RNA: ENSMUST00000141084.2

Smarca1-205, Transcript of Probable global transcription activator SNF2L1, mousemouse

TSL 2 BASIC

Gene Smarca1, Length 1,965 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-205ENSMUST00000141084 Urb2E9Q7L1 1524 aaKnown RBP18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Cux1P53564 1515 aa18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Tiam1Q60610 1591 aa18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Ncapd3Q6ZQK0 1506 aa18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Ap3b1Q9Z1T1 1105 aa18.51■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Lmo7E9PYF4 1699 aaKnown RBP18.5■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Lrriq1Q0P5X1 1673 aa18.5■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Pcf11G3X9Z4 1553 aa18.5■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Pcgf6Q99NA9 353 aa18.48■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Rad54l2Q99NG0 1466 aa18.48■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Naip1Q9QWK5 1403 aa18.47■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Disp1Q3TDN0 1521 aa18.43■□□□□ 0.54
Smarca1-205ENSMUST00000141084 Slx4Q6P1D7 1565 aa18.42■□□□□ 0.54
Smarca1-205ENSMUST00000141084 Magi3Q9EQJ9 1476 aa18.42■□□□□ 0.54
Smarca1-205ENSMUST00000141084 Ift140E9PY46 1464 aa18.39■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Pla2r1Q62028 1487 aa18.39■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Fyco1Q8VDC1 1437 aa18.37■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Polr1aO35134 1717 aaKnown RBP18.37■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Supt5hO55201 1082 aaKnown RBP18.37■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Grin2aP35436 1464 aa18.36■□□□□ 0.53
Smarca1-205ENSMUST00000141084 CntlnA2AM05 1397 aa18.35■□□□□ 0.53
Smarca1-205ENSMUST00000141084 BlmO88700 1416 aa18.35■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Peg3Q3URU2 1571 aa18.33■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Rpap1Q80TE0 1409 aa18.33■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Setd1bQ8CFT2 1985 aa18.32■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Nup160Q9Z0W3 1402 aaKnown RBP18.32■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Pbrm1Q8BSQ9 1634 aaKnown RBP18.32■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Gpatch8A2A6A1 1505 aa18.31■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Kdm5bQ80Y84 1544 aa18.31■□□□□ 0.52
Smarca1-205ENSMUST00000141084 EprsQ8CGC7 1512 aaKnown RBP18.31■□□□□ 0.52
Smarca1-205ENSMUST00000141084 TchhA0A0B4J1F9 1599 aa18.28■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Aebp1Q640N1 1128 aa18.26■□□□□ 0.51
Smarca1-205ENSMUST00000141084 CadpsQ80TJ1 1355 aa18.24■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Abca5Q8K448 1642 aa18.24■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Gm1043A0A140LJC2 1431 aa18.24■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Eif4g3Q80XI3 1579 aaKnown RBP18.22■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Adamts12Q811B3 1600 aa18.22■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Cc2d2bA0A286YDU8 1405 aa18.2■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Lmod2Q3UHZ5 550 aa18.2■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Gm7298A0A0N4SVU1 1476 aa18.2■□□□□ 0.5
Smarca1-205ENSMUST00000141084 WizO88286 1684 aaKnown RBP18.19■□□□□ 0.5
Smarca1-205ENSMUST00000141084 3425401B19RikD3Z1D3 1412 aa18.19■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Rusc2Q80U22 1514 aa18.18■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Abca16E9PWJ7 1678 aa18.13■□□□□ 0.49
Smarca1-205ENSMUST00000141084 PxdnQ3UQ28 1475 aa18.13■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Soga1E1U8D0 1418 aa18.12■□□□□ 0.49
Smarca1-205ENSMUST00000141084 TonslQ6NZL6 1363 aa18.09■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Las1lA2BE28 776 aaKnown RBP18.09■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Sall2Q9QX96 1004 aa18.09■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Lmtk2Q3TYD6 1471 aa18.06■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Abcc2Q8VI47 1543 aa18.06■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Aebp2Q9Z248 504 aaKnown RBP18.06■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Kif27Q7M6Z4 1394 aa18.04■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Naip2Q9QUK4 1447 aa18■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Ccnb3Q810T2 1396 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 BC005561E9Q5E2 1589 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Fhad1A6PWD2 1420 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Fam50aQ9WV03 339 aaKnown RBP17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 A2mQ6GQT1 1474 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Arhgap27A2AB59 869 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Eid3Q3V124 375 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 WrnO09053 1401 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 NexmifQ5DTT1 1515 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Shroom2A2ALU4 1481 aa17.96■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Gcc2Q8CHG3 1679 aa17.96■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Mia2Q91ZV0 1396 aa17.95■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Map3k4O08648 1597 aa17.94■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Vps8Q0P5W1 1427 aa17.94■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Dnmt1P13864 1620 aaKnown RBP17.93■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Rapgef6Q5NCJ1 1609 aa17.91■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Wdr66E9Q743 1299 aa17.9■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Ncoa3O09000 1398 aa17.89■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Dennd4bQ3U1Y4 1499 aa17.89■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Mug1P28665 1476 aa17.89■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Fgd6Q69ZL1 1399 aa17.88■□□□□ 0.45
Smarca1-205ENSMUST00000141084 ClspnQ80YR7 1315 aa17.87■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Arhgef11Q68FM7 1552 aa17.85■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Neo1P97798 1493 aa17.83■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Ankrd36D3Z4K0 1415 aa17.83■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Cdc42bpaQ3UU96 1719 aa17.82■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Zcchc11B2RX14 1644 aaKnown RBP17.81■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Ccer2J3QPU5 274 aa17.81■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Kiaa1551Q5DTW7 1521 aa17.8■□□□□ 0.44
Smarca1-205ENSMUST00000141084 UacaQ8CGB3 1411 aa17.8■□□□□ 0.44
Smarca1-205ENSMUST00000141084 AknaQ80VW7 1404 aa17.79■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Chic2Q9D9G3 165 aa17.79■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Arhgap31A6X8Z5 1425 aa17.78■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Arhgef40Q3UPH7 1517 aa17.78■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Fhod3Q76LL6 1578 aa17.77■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Arhgef12Q8R4H2 1543 aaKnown RBP17.76■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Mroh2aD3Z750 1679 aa17.75■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Kdm6bQ5NCY0 1641 aa17.75■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Jph4Q80WT0 628 aa17.75■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Abcc5Q9R1X5 1436 aa17.74■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Rfx7F8VPJ6 1459 aa17.74■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Ppargc1bQ8VHJ7 1014 aa17.73■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Ccdc141E9Q8Q6 1531 aa17.73■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Adcy10Q8C0T9 1614 aa17.73■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Rrbp1Q99PL5 1605 aaKnown RBP17.72■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Ncoa2Q61026 1462 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms