RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Dcaf1Q80TR8 1506 aa10.67□□□□□ -0.7
Ccdc38-203ENSMUST00000132214 BicraF8VPZ9 1578 aa10.67□□□□□ -0.7
Ccdc38-203ENSMUST00000132214 Lrrc43Q3V0L5 667 aa10.66□□□□□ -0.7
Ccdc38-203ENSMUST00000132214 Dnajc5P60904 198 aa10.65□□□□□ -0.71
Ccdc38-203ENSMUST00000132214 Pde4dQ01063 747 aa10.62□□□□□ -0.71
Ccdc38-203ENSMUST00000132214 Slc24a1Q91WD8 1130 aa10.62□□□□□ -0.71
Ccdc38-203ENSMUST00000132214 Pcgf6Q99NA9 353 aa10.61□□□□□ -0.71
Ccdc38-203ENSMUST00000132214 UncxO08934 530 aa10.61□□□□□ -0.71
Ccdc38-203ENSMUST00000132214 Rnf216P58283 853 aa10.6□□□□□ -0.71
Ccdc38-203ENSMUST00000132214 Grwd1Q810D6 446 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-203ENSMUST00000132214 Ripply1Q2WG77 201 aa10.57□□□□□ -0.72
Ccdc38-203ENSMUST00000132214 Map4k4P97820 1233 aaKnown RBP10.56□□□□□ -0.72
Ccdc38-203ENSMUST00000132214 Nkx1-1G3UXB3 402 aa10.54□□□□□ -0.72
Ccdc38-203ENSMUST00000132214 VaspP70460 375 aaKnown RBP10.54□□□□□ -0.72
Ccdc38-203ENSMUST00000132214 P3h3Q8CG70 732 aa10.54□□□□□ -0.72
Ccdc38-203ENSMUST00000132214 Stk3Q9JI10 497 aa10.51□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 Pds5bQ4VA53 1446 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 ChgaP26339 463 aaKnown RBP10.5□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 Hdac5Q9Z2V6 1113 aa10.5□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 CenpbP27790 599 aa10.49□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 Rhox8Q6VSS7 320 aa10.49□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 Thoc2B1AZI6 1594 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 Kdm2aP59997 1161 aa10.47□□□□□ -0.73
Ccdc38-203ENSMUST00000132214 Npm1Q61937 292 aaKnown RBP10.43□□□□□ -0.74
Ccdc38-203ENSMUST00000132214 Stk25Q9Z2W1 426 aa10.43□□□□□ -0.74
Ccdc38-203ENSMUST00000132214 Las1lA2BE28 776 aaKnown RBP10.43□□□□□ -0.74
Ccdc38-203ENSMUST00000132214 Rb1cc1Q9ESK9 1588 aa10.41□□□□□ -0.74
Ccdc38-203ENSMUST00000132214 Rsph6aQ8CDR2 708 aa10.41□□□□□ -0.74
Ccdc38-203ENSMUST00000132214 Slc7a3P70423 618 aa10.41□□□□□ -0.74
Ccdc38-203ENSMUST00000132214 Sra1Q80VJ2 232 aa10.39□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Amer1Q7TS75 1132 aa10.37□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Ric3Q8BPM6 367 aa10.36□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Zc3h15Q3TIV5 426 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Scaf1Q5U4C3 1256 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Slc24a3Q99PD7 645 aa10.34□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Ggt6Q6PDE7 497 aa10.34□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Ak7Q9D2H2 614 aa10.34□□□□□ -0.75
Ccdc38-203ENSMUST00000132214 Os9Q8K2C7 672 aa10.33□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Atad2bE9Q166 1460 aaKnown RBP10.33□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Arhgef1Q61210 920 aaKnown RBP10.32□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Stk24Q99KH8 431 aa10.32□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Bcl11aQ9QYE3 773 aa10.31□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Ercc6F8VPZ5 1481 aa10.29□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Cc2d2aQ8CFW7 1633 aa10.29□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Zbtb7bQ64321 544 aa10.29□□□□□ -0.76
Ccdc38-203ENSMUST00000132214 Cnksr2Q80YA9 1032 aa10.26□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Crybg2B7ZCC2 1516 aa10.25□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Baz1aO88379 1555 aa10.25□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Gm13697A2AK42 830 aa10.24□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Atad2Q8CDM1 1040 aa10.22□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Dhx30Q99PU8 1217 aaKnown RBP10.22□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Rtl1Q7M732 1744 aa10.21□□□□□ -0.77
Ccdc38-203ENSMUST00000132214 Fam135aQ6NS59 1506 aa10.2□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Sgip1Q8VD37 806 aa10.2□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Gpr37l1Q99JG2 481 aa10.19□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Mier1Q5UAK0 511 aa10.18□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 PygbQ8CI94 843 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Zcchc6Q5BLK4 1491 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Apba2P98084 750 aa10.17□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Ccdc180J3QNE4 1664 aa10.16□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Smarca2Q6DIC0 1577 aa10.16□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Chrm1P12657 460 aa10.15□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 TprnA2AI08 749 aaKnown RBP10.15□□□□□ -0.78
Ccdc38-203ENSMUST00000132214 Pdap1Q3UHX2 181 aaKnown RBP10.14□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Baz1bQ9Z277 1479 aa10.13□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Smarca4Q3TKT4 1613 aaKnown RBP10.12□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Fam117aQ7TNF9 451 aa10.12□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Iqgap2Q3UQ44 1575 aa10.11□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Rad21Q61550 635 aaKnown RBP10.1□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Bcl2l13P59017 434 aa10.09□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Acin1Q9JIX8 1338 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Phldb1Q6PDH0 1371 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-203ENSMUST00000132214 Wdr62Q3U3T8 1523 aa10.07□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 Hnrnpul2Q00PI9 745 aaKnown RBP10.06□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 1700006A11RikB9EHI3 544 aa10.06□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 Cadps2Q8BYR5 1297 aa10.06□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 Pcdhb17Q91VD8 799 aa10.06□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 CrebzfQ91ZR3 358 aa10.05□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 Frmpd1A2AKB4 1549 aa10.04□□□□□ -0.8
Ccdc38-203ENSMUST00000132214 Brpf1B2RRD7 1212 aa10.01□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Ubl4bQ9CQ84 188 aa10.01□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Nyap1Q6PFX7 833 aa10□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Pitpnm1O35954 1243 aa9.99□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Trim35Q8C006 501 aa9.99□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Cecr2E9Q2Z1 1453 aa9.99□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Mrc2Q64449 1479 aa9.98□□□□□ -0.81
Ccdc38-203ENSMUST00000132214 Znf704Q9ERQ3 566 aa9.94□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Slain2Q8CI08 581 aa9.94□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 PrkcshO08795 521 aa9.92□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 PrimpolQ6P1E7 537 aa9.92□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Ciz1Q8VEH2 845 aa9.91□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Nap1l5Q9JJF0 156 aa9.91□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 E9Q0B3 247 aa9.91□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Ccdc96Q9CR92 584 aa9.91□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Mllt3A2AM29 569 aa9.9□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Cypt1Q8CH20 168 aa9.9□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 E2f4Q8R0K9 410 aa9.9□□□□□ -0.82
Ccdc38-203ENSMUST00000132214 Pde8bE9Q4S1 865 aa9.9□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 Rtl5Q5DTT4 599 aa9.9□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 Ddx11Q6AXC6 880 aa9.9□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms