RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Tiam1Q60610 1591 aa16.15■□□□□ 0.18
Ift88-201ENSMUST00000122063 AqrQ8CFQ3 1481 aaKnown RBP16.14■□□□□ 0.17
Ift88-201ENSMUST00000122063 Duox2A2AQ99 1517 aa16.14■□□□□ 0.17
Ift88-201ENSMUST00000122063 Pcf11G3X9Z4 1553 aa16.13■□□□□ 0.17
Ift88-201ENSMUST00000122063 ClspnQ80YR7 1315 aa16.13■□□□□ 0.17
Ift88-201ENSMUST00000122063 PogzQ8BZH4 1409 aaKnown RBP16.12■□□□□ 0.17
Ift88-201ENSMUST00000122063 Naip1Q9QWK5 1403 aa16.12■□□□□ 0.17
Ift88-201ENSMUST00000122063 Efcab5A0JP43 1406 aa16.11■□□□□ 0.17
Ift88-201ENSMUST00000122063 Fam135aQ6NS59 1506 aa16.1■□□□□ 0.17
Ift88-201ENSMUST00000122063 Cux1P53564 1515 aa16.1■□□□□ 0.17
Ift88-201ENSMUST00000122063 Carmil1Q6EDY6 1374 aa16.09■□□□□ 0.17
Ift88-201ENSMUST00000122063 Slx4Q6P1D7 1565 aa16.09■□□□□ 0.17
Ift88-201ENSMUST00000122063 Erich3F6QRE9 1637 aa16.09■□□□□ 0.17
Ift88-201ENSMUST00000122063 Dhx29Q6PGC1 1365 aaKnown RBP16.08■□□□□ 0.16
Ift88-201ENSMUST00000122063 Samd9lQ69Z37 1561 aa16.04■□□□□ 0.16
Ift88-201ENSMUST00000122063 Rad54l2Q99NG0 1466 aa16.04■□□□□ 0.16
Ift88-201ENSMUST00000122063 SynmQ70IV5 1561 aa16■□□□□ 0.15
Ift88-201ENSMUST00000122063 Lmo7E9PYF4 1699 aaKnown RBP15.99■□□□□ 0.15
Ift88-201ENSMUST00000122063 CntlnA2AM05 1397 aa15.98■□□□□ 0.15
Ift88-201ENSMUST00000122063 Nop58Q6DFW4 536 aaKnown RBP15.97■□□□□ 0.15
Ift88-201ENSMUST00000122063 Aebp1Q640N1 1128 aa15.97■□□□□ 0.15
Ift88-201ENSMUST00000122063 Fyco1Q8VDC1 1437 aa15.96■□□□□ 0.15
Ift88-201ENSMUST00000122063 Urb2E9Q7L1 1524 aaKnown RBP15.96■□□□□ 0.14
Ift88-201ENSMUST00000122063 Kdm5bQ80Y84 1544 aa15.95■□□□□ 0.14
Ift88-201ENSMUST00000122063 Ube2uB1AUC4 352 aa15.95■□□□□ 0.14
Ift88-201ENSMUST00000122063 Crocc2F6XLV1 1638 aa15.93■□□□□ 0.14
Ift88-201ENSMUST00000122063 Cdk11bP24788 784 aaKnown RBP15.93■□□□□ 0.14
Ift88-201ENSMUST00000122063 Kif21aQ9QXL2 1672 aa15.93■□□□□ 0.14
Ift88-201ENSMUST00000122063 Dnajc5bQ9CQ94 199 aa15.91■□□□□ 0.14
Ift88-201ENSMUST00000122063 Mrc2Q64449 1479 aa15.88■□□□□ 0.13
Ift88-201ENSMUST00000122063 TchhA0A0B4J1F9 1599 aa15.88■□□□□ 0.13
Ift88-201ENSMUST00000122063 3425401B19RikD3Z1D3 1412 aa15.88■□□□□ 0.13
Ift88-201ENSMUST00000122063 Polr1aO35134 1717 aaKnown RBP15.88■□□□□ 0.13
Ift88-201ENSMUST00000122063 NclP09405 707 aaKnown RBP15.86■□□□□ 0.13
Ift88-201ENSMUST00000122063 Chic2Q9D9G3 165 aa15.86■□□□□ 0.13
Ift88-201ENSMUST00000122063 Mapk8ip2Q9ERE9 830 aa15.86■□□□□ 0.13
Ift88-201ENSMUST00000122063 EprsQ8CGC7 1512 aaKnown RBP15.85■□□□□ 0.13
Ift88-201ENSMUST00000122063 Rpap1Q80TE0 1409 aa15.84■□□□□ 0.13
Ift88-201ENSMUST00000122063 Pla2r1Q62028 1487 aa15.82■□□□□ 0.12
Ift88-201ENSMUST00000122063 Gm1043A0A140LJC2 1431 aa15.82■□□□□ 0.12
Ift88-201ENSMUST00000122063 Peg3Q3URU2 1571 aa15.82■□□□□ 0.12
Ift88-201ENSMUST00000122063 Plb1Q3TTY0 1478 aa15.81■□□□□ 0.12
Ift88-201ENSMUST00000122063 Gm7298A0A0N4SVU1 1476 aa15.8■□□□□ 0.12
Ift88-201ENSMUST00000122063 Ccnb3Q810T2 1396 aa15.79■□□□□ 0.12
Ift88-201ENSMUST00000122063 Hspa5P20029 655 aaKnown RBP15.79■□□□□ 0.12
Ift88-201ENSMUST00000122063 Anks4bQ8K3X6 423 aa15.79■□□□□ 0.12
Ift88-201ENSMUST00000122063 Kif27Q7M6Z4 1394 aa15.78■□□□□ 0.12
Ift88-201ENSMUST00000122063 CadpsQ80TJ1 1355 aa15.78■□□□□ 0.12
Ift88-201ENSMUST00000122063 Grin2aP35436 1464 aa15.77■□□□□ 0.12
Ift88-201ENSMUST00000122063 Mia2Q91ZV0 1396 aa15.77■□□□□ 0.12
Ift88-201ENSMUST00000122063 Magi3Q9EQJ9 1476 aa15.77■□□□□ 0.12
Ift88-201ENSMUST00000122063 Fhad1A6PWD2 1420 aa15.75■□□□□ 0.11
Ift88-201ENSMUST00000122063 WizO88286 1684 aaKnown RBP15.74■□□□□ 0.11
Ift88-201ENSMUST00000122063 Gpatch8A2A6A1 1505 aa15.74■□□□□ 0.11
Ift88-201ENSMUST00000122063 A2mQ6GQT1 1474 aa15.73■□□□□ 0.11
Ift88-201ENSMUST00000122063 Vps8Q0P5W1 1427 aa15.72■□□□□ 0.11
Ift88-201ENSMUST00000122063 Naip2Q9QUK4 1447 aa15.72■□□□□ 0.11
Ift88-201ENSMUST00000122063 Csrnp3P59055 597 aa15.71■□□□□ 0.11
Ift88-201ENSMUST00000122063 Abca5Q8K448 1642 aa15.71■□□□□ 0.11
Ift88-201ENSMUST00000122063 Ccer2J3QPU5 274 aa15.69■□□□□ 0.1
Ift88-201ENSMUST00000122063 Disp1Q3TDN0 1521 aa15.69■□□□□ 0.1
Ift88-201ENSMUST00000122063 NexmifQ5DTT1 1515 aa15.68■□□□□ 0.1
Ift88-201ENSMUST00000122063 PxdnQ3UQ28 1475 aa15.67■□□□□ 0.1
Ift88-201ENSMUST00000122063 Arhgap27A2AB59 869 aa15.67■□□□□ 0.1
Ift88-201ENSMUST00000122063 BC005561E9Q5E2 1589 aa15.67■□□□□ 0.1
Ift88-201ENSMUST00000122063 WrnO09053 1401 aa15.66■□□□□ 0.1
Ift88-201ENSMUST00000122063 Ankrd36D3Z4K0 1415 aa15.64■□□□□ 0.09
Ift88-201ENSMUST00000122063 Adamts12Q811B3 1600 aa15.63■□□□□ 0.09
Ift88-201ENSMUST00000122063 Setd1bQ8CFT2 1985 aa15.61■□□□□ 0.09
Ift88-201ENSMUST00000122063 Soga1E1U8D0 1418 aa15.6■□□□□ 0.09
Ift88-201ENSMUST00000122063 Lmtk2Q3TYD6 1471 aa15.6■□□□□ 0.09
Ift88-201ENSMUST00000122063 Cabp1Q9JLK7 227 aa15.59■□□□□ 0.09
Ift88-201ENSMUST00000122063 UacaQ8CGB3 1411 aa15.58■□□□□ 0.08
Ift88-201ENSMUST00000122063 Abca16E9PWJ7 1678 aa15.58■□□□□ 0.08
Ift88-201ENSMUST00000122063 Gcc2Q8CHG3 1679 aa15.57■□□□□ 0.08
Ift88-201ENSMUST00000122063 Ift140E9PY46 1464 aa15.57■□□□□ 0.08
Ift88-201ENSMUST00000122063 Fkbp15Q6P9Q6 1216 aaKnown RBP15.55■□□□□ 0.08
Ift88-201ENSMUST00000122063 Sin3aQ60520 1274 aaKnown RBP15.54■□□□□ 0.08
Ift88-201ENSMUST00000122063 Zfp644E9QA22 1323 aa15.54■□□□□ 0.08
Ift88-201ENSMUST00000122063 Mug1P28665 1476 aa15.53■□□□□ 0.08
Ift88-201ENSMUST00000122063 Dennd4bQ3U1Y4 1499 aa15.53■□□□□ 0.08
Ift88-201ENSMUST00000122063 Mphosph9A6H5Y1 991 aa15.53■□□□□ 0.08
Ift88-201ENSMUST00000122063 Ncoa3O09000 1398 aa15.52■□□□□ 0.08
Ift88-201ENSMUST00000122063 Plekhh2Q8C115 1491 aa15.52■□□□□ 0.07
Ift88-201ENSMUST00000122063 Nup160Q9Z0W3 1402 aaKnown RBP15.52■□□□□ 0.07
Ift88-201ENSMUST00000122063 Gm38655A0A286YDK6 273 aa15.52■□□□□ 0.07
Ift88-201ENSMUST00000122063 Gm13697A2AK42 830 aa15.51■□□□□ 0.07
Ift88-201ENSMUST00000122063 Mtus2Q3UHD3 1353 aa15.5■□□□□ 0.07
Ift88-201ENSMUST00000122063 Ncoa2Q61026 1462 aa15.5■□□□□ 0.07
Ift88-201ENSMUST00000122063 Rapgef6Q5NCJ1 1609 aa15.5■□□□□ 0.07
Ift88-201ENSMUST00000122063 1700123L14RikQ3V2K7 440 aa15.49■□□□□ 0.07
Ift88-201ENSMUST00000122063 Lrriq1Q0P5X1 1673 aa15.49■□□□□ 0.07
Ift88-201ENSMUST00000122063 Abcc5Q9R1X5 1436 aa15.48■□□□□ 0.07
Ift88-201ENSMUST00000122063 Arhgef40Q3UPH7 1517 aa15.48■□□□□ 0.07
Ift88-201ENSMUST00000122063 Slc24a1Q91WD8 1130 aa15.47■□□□□ 0.07
Ift88-201ENSMUST00000122063 Arhgap31A6X8Z5 1425 aa15.47■□□□□ 0.07
Ift88-201ENSMUST00000122063 Naip5Q9R016 1403 aa15.46■□□□□ 0.07
Ift88-201ENSMUST00000122063 Pbrm1Q8BSQ9 1634 aaKnown RBP15.46■□□□□ 0.06
Ift88-201ENSMUST00000122063 Pkd2O35245 966 aa15.45■□□□□ 0.06
Ift88-201ENSMUST00000122063 Shroom2A2ALU4 1481 aa15.45■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms