RNA–Protein interactions for RNA: ENSMUST00000118281.1

Hmgb1-ps4-201, mousemouse

BASIC

Gene Hmgb1-ps4, Length 635 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps4-201ENSMUST00000118281 Mkrn3Q60764 544 aa8.37□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Znf703P0CL69 594 aa8.36□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Pdap1Q3UHX2 181 aaKnown RBP8.36□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Slc24a1Q91WD8 1130 aa8.36□□□□□ -1.07
Hmgb1-ps4-201ENSMUST00000118281 Chrm1P12657 460 aa8.33□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 SnphQ80U23 495 aa8.33□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 CrebzfQ91ZR3 358 aa8.33□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 UncxO08934 530 aa8.32□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 Zeb1Q64318 1117 aa8.31□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 Rsph6aQ8CDR2 708 aa8.31□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 Stk3Q9JI10 497 aa8.3□□□□□ -1.08
Hmgb1-ps4-201ENSMUST00000118281 Clcn6O35454 870 aa8.26□□□□□ -1.09
Hmgb1-ps4-201ENSMUST00000118281 Esf1Q3V1V3 845 aaKnown RBP8.25□□□□□ -1.09
Hmgb1-ps4-201ENSMUST00000118281 Cacnb1Q8R3Z5 597 aa8.24□□□□□ -1.09
Hmgb1-ps4-201ENSMUST00000118281 Dnajc5P60904 198 aa8.23□□□□□ -1.09
Hmgb1-ps4-201ENSMUST00000118281 P3h3Q8CG70 732 aa8.23□□□□□ -1.09
Hmgb1-ps4-201ENSMUST00000118281 Stk25Q9Z2W1 426 aa8.23□□□□□ -1.09
Hmgb1-ps4-201ENSMUST00000118281 Map4k4P97820 1233 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-ps4-201ENSMUST00000118281 Dok7Q18PE0 504 aa8.21□□□□□ -1.1
Hmgb1-ps4-201ENSMUST00000118281 Stk24Q99KH8 431 aa8.19□□□□□ -1.1
Hmgb1-ps4-201ENSMUST00000118281 GapdhsQ64467 440 aa8.18□□□□□ -1.1
Hmgb1-ps4-201ENSMUST00000118281 Pcdhb17Q91VD8 799 aa8.15□□□□□ -1.1
Hmgb1-ps4-201ENSMUST00000118281 Ndufv2Q9D6J6 248 aa8.12□□□□□ -1.11
Hmgb1-ps4-201ENSMUST00000118281 Mier1Q5UAK0 511 aa8.11□□□□□ -1.11
Hmgb1-ps4-201ENSMUST00000118281 Sgip1Q8VD37 806 aa8.11□□□□□ -1.11
Hmgb1-ps4-201ENSMUST00000118281 Cypt1Q8CH20 168 aa8.08□□□□□ -1.12
Hmgb1-ps4-201ENSMUST00000118281 Spryd3E9Q9B3 442 aa8.07□□□□□ -1.12
Hmgb1-ps4-201ENSMUST00000118281 ChgaP26339 463 aaKnown RBP8.06□□□□□ -1.12
Hmgb1-ps4-201ENSMUST00000118281 Znf579Q80VM4 562 aa8.05□□□□□ -1.12
Hmgb1-ps4-201ENSMUST00000118281 E9Q0B3 247 aa8.04□□□□□ -1.12
Hmgb1-ps4-201ENSMUST00000118281 Arhgef1Q61210 920 aaKnown RBP8.02□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Bclaf1Q8K019 919 aaKnown RBP8.02□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Tulp1Q9Z273 543 aa8.02□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Ubap1lG3UW59 384 aa8.01□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Zbtb38Q3LR78 1197 aa8.01□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Zranb1Q7M760 708 aa8.01□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Cnksr2Q80YA9 1032 aa8□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Prim1P20664 417 aa7.99□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 1700006A11RikB9EHI3 544 aa7.98□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 VaspP70460 375 aaKnown RBP7.98□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Znf516Q7TSH3 1157 aa7.98□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Ric3Q8BPM6 367 aa7.98□□□□□ -1.13
Hmgb1-ps4-201ENSMUST00000118281 Gpr37l1Q99JG2 481 aa7.96□□□□□ -1.14
Hmgb1-ps4-201ENSMUST00000118281 Slc7a3P70423 618 aa7.95□□□□□ -1.14
Hmgb1-ps4-201ENSMUST00000118281 Pdzrn4E9PUZ9 1014 aa7.92□□□□□ -1.14
Hmgb1-ps4-201ENSMUST00000118281 Erich4Q3UNU4 136 aa7.92□□□□□ -1.14
Hmgb1-ps4-201ENSMUST00000118281 Tmem132aQ922P8 1018 aa7.92□□□□□ -1.14
Hmgb1-ps4-201ENSMUST00000118281 Gm45233A0A0N4SVE0 221 aa7.91□□□□□ -1.14
Hmgb1-ps4-201ENSMUST00000118281 Stag3O70576 1240 aa7.88□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Map3k10Q66L42 940 aa7.88□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Kank4Q6P9J5 1016 aa7.88□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Tox2A2A472 547 aa7.87□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Znf710Q3U288 666 aa7.87□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Nap1l5Q9JJF0 156 aa7.87□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Gjc2Q8BQU6 440 aa7.86□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Slc24a3Q99PD7 645 aa7.86□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Speer2E9Q9U2 264 aa7.85□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Evi5P97366 809 aa7.85□□□□□ -1.15
Hmgb1-ps4-201ENSMUST00000118281 Jph4Q80WT0 628 aa7.83□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Foxp4Q9DBY0 795 aaKnown RBP7.82□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Ak7Q9D2H2 614 aa7.81□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Fkbp4P30416 458 aa7.79□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Ddx11Q6AXC6 880 aa7.79□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 IncenpQ9WU62 880 aa7.79□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Vsig10D3YX43 558 aa7.78□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Pcdhb20Q91XZ9 799 aa7.78□□□□□ -1.16
Hmgb1-ps4-201ENSMUST00000118281 Actn4P57780 912 aaKnown RBP7.77□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Apba2P98084 750 aa7.77□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 OsbpQ3B7Z2 805 aa7.77□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Pde8bE9Q4S1 865 aa7.76□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Zc3h15Q3TIV5 426 aaKnown RBP7.75□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Pak3Q61036 559 aa7.75□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 ArntlQ9WTL8 632 aa7.75□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Ankrd65F6YK91 380 aa7.73□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Otop3Q80UF9 577 aa7.73□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 TMEM121BQ99MX7 572 aa7.73□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Slain2Q8CI08 581 aa7.72□□□□□ -1.17
Hmgb1-ps4-201ENSMUST00000118281 Pdia6Q922R8 440 aaKnown RBP7.71□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 C1qbpO35658 278 aa7.7□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Lrrc14bQ3UJB3 510 aa7.7□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 E2f4Q8R0K9 410 aa7.7□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Ciz1Q8VEH2 845 aa7.69□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Npm1Q61937 292 aaKnown RBP7.68□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Scnn1bQ9WU38 638 aa7.68□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Dmrta2A2A9A2 531 aa7.67□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 ZyxQ62523 564 aa7.67□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Kdm2aP59997 1161 aa7.66□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Ggt6Q6PDE7 497 aa7.65□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Mnx1Q9QZW9 404 aa7.65□□□□□ -1.18
Hmgb1-ps4-201ENSMUST00000118281 Sptlc1O35704 473 aa7.64□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Bcl2l13P59017 434 aa7.64□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Eya1P97767 591 aa7.63□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Irx6Q9ER75 438 aa7.63□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Mllt3A2AM29 569 aa7.62□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Apba1B2RUJ5 842 aa7.61□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Ffar3Q3UFD7 319 aa7.61□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Dhx30Q99PU8 1217 aaKnown RBP7.61□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Bcl11bQ99PV8 884 aa7.61□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Irf6P97431 467 aa7.6□□□□□ -1.19
Hmgb1-ps4-201ENSMUST00000118281 Fam117aQ7TNF9 451 aa7.59□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms