RNA–Protein interactions for RNA: ENSMUST00000117940.1

Hmgb1-rs18-201, mousemouse

BASIC

Gene Hmgb1-rs18, Length 627 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-rs18-201ENSMUST00000117940 Spock2Q9ER58 423 aa9.1□□□□□ -0.95
Hmgb1-rs18-201ENSMUST00000117940 Vsig10D3YX43 558 aa9.08□□□□□ -0.96
Hmgb1-rs18-201ENSMUST00000117940 Skap1Q3UUV5 355 aa9.08□□□□□ -0.96
Hmgb1-rs18-201ENSMUST00000117940 Zranb1Q7M760 708 aa9.08□□□□□ -0.96
Hmgb1-rs18-201ENSMUST00000117940 Pdap1Q3UHX2 181 aaKnown RBP9.07□□□□□ -0.96
Hmgb1-rs18-201ENSMUST00000117940 Ferd3lQ923Z4 168 aa9.03□□□□□ -0.96
Hmgb1-rs18-201ENSMUST00000117940 Map3k10Q66L42 940 aa9.01□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 Gjc2Q8BQU6 440 aa9.01□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 Slc24a1Q91WD8 1130 aa9.01□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 Zbtb22Q9Z0G7 638 aa9.01□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 Esf1Q3V1V3 845 aaKnown RBP8.99□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 Gm13697A2AK42 830 aa8.97□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 TimelessQ9R1X4 1197 aa8.97□□□□□ -0.97
Hmgb1-rs18-201ENSMUST00000117940 Ndufv2Q9D6J6 248 aa8.95□□□□□ -0.98
Hmgb1-rs18-201ENSMUST00000117940 Znf710Q3U288 666 aa8.92□□□□□ -0.98
Hmgb1-rs18-201ENSMUST00000117940 Zeb1Q64318 1117 aa8.92□□□□□ -0.98
Hmgb1-rs18-201ENSMUST00000117940 Znf516Q7TSH3 1157 aa8.91□□□□□ -0.98
Hmgb1-rs18-201ENSMUST00000117940 Slc4a2P13808 1237 aaKnown RBP8.89□□□□□ -0.99
Hmgb1-rs18-201ENSMUST00000117940 Chrm1P12657 460 aa8.88□□□□□ -0.99
Hmgb1-rs18-201ENSMUST00000117940 Gm45233A0A0N4SVE0 221 aa8.85□□□□□ -0.99
Hmgb1-rs18-201ENSMUST00000117940 Prim1P20664 417 aa8.84□□□□□ -0.99
Hmgb1-rs18-201ENSMUST00000117940 Mkrn3Q60764 544 aa8.84□□□□□ -0.99
Hmgb1-rs18-201ENSMUST00000117940 Pcdhb17Q91VD8 799 aa8.84□□□□□ -0.99
Hmgb1-rs18-201ENSMUST00000117940 Ubap1lG3UW59 384 aa8.83□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 Znf579Q80VM4 562 aa8.83□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 Spryd3E9Q9B3 442 aa8.81□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 Bclaf1Q8K019 919 aaKnown RBP8.8□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 Arhgef1Q61210 920 aaKnown RBP8.79□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 P3h3Q8CG70 732 aa8.79□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 TMEM121BQ99MX7 572 aa8.79□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 Rgl2Q61193 778 aa8.78□□□□□ -1
Hmgb1-rs18-201ENSMUST00000117940 OsbpQ3B7Z2 805 aa8.77□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 Tulp1Q9Z273 543 aa8.77□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 Dmrta2A2A9A2 531 aa8.75□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 E9Q0B3 247 aa8.75□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 Kank4Q6P9J5 1016 aa8.75□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 Stk3Q9JI10 497 aa8.75□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 Rsph6aQ8CDR2 708 aa8.73□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 Fxr2Q9WVR4 673 aaKnown RBP8.73□□□□□ -1.01
Hmgb1-rs18-201ENSMUST00000117940 ArxO35085 564 aa8.71□□□□□ -1.02
Hmgb1-rs18-201ENSMUST00000117940 Noa1Q9JJG9 693 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-rs18-201ENSMUST00000117940 UncxO08934 530 aa8.7□□□□□ -1.02
Hmgb1-rs18-201ENSMUST00000117940 Dnajc5P60904 198 aa8.68□□□□□ -1.02
Hmgb1-rs18-201ENSMUST00000117940 Tmem132aQ922P8 1018 aa8.68□□□□□ -1.02
Hmgb1-rs18-201ENSMUST00000117940 Jph4Q80WT0 628 aa8.67□□□□□ -1.02
Hmgb1-rs18-201ENSMUST00000117940 Stk24Q99KH8 431 aa8.64□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Stk25Q9Z2W1 426 aa8.64□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Evx2P49749 475 aa8.61□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Cnksr2Q80YA9 1032 aa8.61□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Kiaa1522A2A7S8 1013 aa8.6□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Zbtb38Q3LR78 1197 aa8.6□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Map4k4P97820 1233 aaKnown RBP8.59□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Ripply1Q2WG77 201 aa8.59□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Pak3Q61036 559 aa8.59□□□□□ -1.03
Hmgb1-rs18-201ENSMUST00000117940 Pdzrn4E9PUZ9 1014 aa8.58□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 Stag3O70576 1240 aa8.58□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 Evi5P97366 809 aa8.57□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 VaspP70460 375 aaKnown RBP8.56□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 ZxdbA2CE44 873 aa8.54□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 ChgaP26339 463 aaKnown RBP8.54□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 C1qbpO35658 278 aa8.53□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 Mier1Q5UAK0 511 aa8.53□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 Cypt1Q8CH20 168 aa8.53□□□□□ -1.04
Hmgb1-rs18-201ENSMUST00000117940 Actn4P57780 912 aaKnown RBP8.52□□□□□ -1.05
Hmgb1-rs18-201ENSMUST00000117940 Sgip1Q8VD37 806 aa8.52□□□□□ -1.05
Hmgb1-rs18-201ENSMUST00000117940 Tox2A2A472 547 aa8.51□□□□□ -1.05
Hmgb1-rs18-201ENSMUST00000117940 Fkbp4P30416 458 aa8.5□□□□□ -1.05
Hmgb1-rs18-201ENSMUST00000117940 Nap1l5Q9JJF0 156 aa8.48□□□□□ -1.05
Hmgb1-rs18-201ENSMUST00000117940 1700006A11RikB9EHI3 544 aa8.45□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Ankrd65F6YK91 380 aa8.44□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Scnn1bQ9WU38 638 aa8.44□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Otop3Q80UF9 577 aa8.43□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Ric3Q8BPM6 367 aa8.42□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Slc7a3P70423 618 aa8.41□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Ttbk1Q6PCN3 1308 aa8.4□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 Erich4Q3UNU4 136 aa8.4□□□□□ -1.06
Hmgb1-rs18-201ENSMUST00000117940 UbtfP25976 765 aaKnown RBP8.39□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Kdm2aP59997 1161 aa8.38□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Zc3h15Q3TIV5 426 aaKnown RBP8.36□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Dcbld2Q91ZV3 769 aa8.36□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Rnf225Q9D7D1 332 aa8.36□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Apba1B2RUJ5 842 aa8.35□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Axin1O35625 863 aa8.35□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Ggt6Q6PDE7 497 aa8.35□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Fam181bQ80VF6 417 aa8.35□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Os9Q8K2C7 672 aa8.35□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Gpr37l1Q99JG2 481 aa8.35□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Pcdhb20Q91XZ9 799 aa8.34□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Mnx1Q9QZW9 404 aa8.34□□□□□ -1.07
Hmgb1-rs18-201ENSMUST00000117940 Dkk1O54908 272 aa8.33□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Lrrc14bQ3UJB3 510 aa8.33□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Fndc3aQ8BX90 1198 aa8.33□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Speer2E9Q9U2 264 aa8.32□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Ak7Q9D2H2 614 aa8.31□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Scaf1Q5U4C3 1256 aaKnown RBP8.3□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 St18Q80TY4 1045 aa8.3□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Slc24a3Q99PD7 645 aa8.29□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Npm1Q61937 292 aaKnown RBP8.28□□□□□ -1.08
Hmgb1-rs18-201ENSMUST00000117940 Dhx30Q99PU8 1217 aaKnown RBP8.27□□□□□ -1.09
Hmgb1-rs18-201ENSMUST00000117940 IncenpQ9WU62 880 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms