RNA–Protein interactions for RNA: ENSMUST00000111190.8

Cd44-204, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-204ENSMUST00000111190 Map3k1P53349 1493 aa11.88□□□□□ -0.51
Cd44-204ENSMUST00000111190 PtprkP35822 1457 aa11.87□□□□□ -0.51
Cd44-204ENSMUST00000111190 Pcdh10E9PXQ7 1057 aa11.86□□□□□ -0.51
Cd44-204ENSMUST00000111190 Ttbk1Q6PCN3 1308 aa11.86□□□□□ -0.51
Cd44-204ENSMUST00000111190 Arhgap35Q91YM2 1499 aa11.86□□□□□ -0.51
Cd44-204ENSMUST00000111190 Nup160Q9Z0W3 1402 aaKnown RBP11.84□□□□□ -0.51
Cd44-204ENSMUST00000111190 Efcab5A0JP43 1406 aa11.83□□□□□ -0.52
Cd44-204ENSMUST00000111190 Gm156Q58A37 223 aa11.83□□□□□ -0.52
Cd44-204ENSMUST00000111190 Adgrl3Q80TS3 1537 aa11.82□□□□□ -0.52
Cd44-204ENSMUST00000111190 Fgd6Q69ZL1 1399 aa11.81□□□□□ -0.52
Cd44-204ENSMUST00000111190 Slc4a1apE9PX68 744 aa11.8□□□□□ -0.52
Cd44-204ENSMUST00000111190 AqrQ8CFQ3 1481 aaKnown RBP11.79□□□□□ -0.52
Cd44-204ENSMUST00000111190 Mroh2bQ7M6Y6 1581 aa11.79□□□□□ -0.52
Cd44-204ENSMUST00000111190 Myt1lP97500 1187 aa11.77□□□□□ -0.52
Cd44-204ENSMUST00000111190 Arhgef5E9Q7D5 1581 aa11.77□□□□□ -0.53
Cd44-204ENSMUST00000111190 Rad54l2Q99NG0 1466 aa11.76□□□□□ -0.53
Cd44-204ENSMUST00000111190 Erich3F6QRE9 1637 aa11.76□□□□□ -0.53
Cd44-204ENSMUST00000111190 Pbrm1Q8BSQ9 1634 aaKnown RBP11.76□□□□□ -0.53
Cd44-204ENSMUST00000111190 Gapvd1Q6PAR5 1458 aa11.76□□□□□ -0.53
Cd44-204ENSMUST00000111190 Samd9lQ69Z37 1561 aa11.76□□□□□ -0.53
Cd44-204ENSMUST00000111190 Setd1bQ8CFT2 1985 aa11.74□□□□□ -0.53
Cd44-204ENSMUST00000111190 SynmQ70IV5 1561 aa11.73□□□□□ -0.53
Cd44-204ENSMUST00000111190 Grin2aP35436 1464 aa11.73□□□□□ -0.53
Cd44-204ENSMUST00000111190 PtprtQ99M80 1454 aa11.73□□□□□ -0.53
Cd44-204ENSMUST00000111190 Clip1Q922J3 1391 aa11.72□□□□□ -0.53
Cd44-204ENSMUST00000111190 Cep170Q6A065 1588 aa11.72□□□□□ -0.53
Cd44-204ENSMUST00000111190 AknaQ80VW7 1404 aa11.71□□□□□ -0.53
Cd44-204ENSMUST00000111190 Eea1Q8BL66 1411 aa11.7□□□□□ -0.54
Cd44-204ENSMUST00000111190 Magi3Q9EQJ9 1476 aa11.69□□□□□ -0.54
Cd44-204ENSMUST00000111190 Ankrd26Q811D2 1581 aa11.69□□□□□ -0.54
Cd44-204ENSMUST00000111190 CadpsQ80TJ1 1355 aa11.69□□□□□ -0.54
Cd44-204ENSMUST00000111190 Zeb1Q64318 1117 aa11.69□□□□□ -0.54
Cd44-204ENSMUST00000111190 Ythdc2B2RR83 1445 aaKnown RBP11.68□□□□□ -0.54
Cd44-204ENSMUST00000111190 Polr1aO35134 1717 aaKnown RBP11.68□□□□□ -0.54
Cd44-204ENSMUST00000111190 Carmil1Q6EDY6 1374 aa11.67□□□□□ -0.54
Cd44-204ENSMUST00000111190 Arap1Q4LDD4 1452 aa11.66□□□□□ -0.54
Cd44-204ENSMUST00000111190 Abcc1O35379 1528 aa11.65□□□□□ -0.54
Cd44-204ENSMUST00000111190 Arhgap27A2AB59 869 aa11.65□□□□□ -0.54
Cd44-204ENSMUST00000111190 Lmo7E9PYF4 1699 aaKnown RBP11.65□□□□□ -0.55
Cd44-204ENSMUST00000111190 Gpatch8A2A6A1 1505 aa11.63□□□□□ -0.55
Cd44-204ENSMUST00000111190 Soga1E1U8D0 1418 aa11.63□□□□□ -0.55
Cd44-204ENSMUST00000111190 Setd5Q5XJV7 1441 aa11.63□□□□□ -0.55
Cd44-204ENSMUST00000111190 Pcf11G3X9Z4 1553 aa11.62□□□□□ -0.55
Cd44-204ENSMUST00000111190 Tiam1Q60610 1591 aa11.62□□□□□ -0.55
Cd44-204ENSMUST00000111190 Ppp1r18Q8BQ30 594 aa11.61□□□□□ -0.55
Cd44-204ENSMUST00000111190 Cux1P53564 1515 aa11.6□□□□□ -0.55
Cd44-204ENSMUST00000111190 Pla2r1Q62028 1487 aa11.6□□□□□ -0.55
Cd44-204ENSMUST00000111190 Peg3Q3URU2 1571 aa11.58□□□□□ -0.56
Cd44-204ENSMUST00000111190 Fyco1Q8VDC1 1437 aa11.58□□□□□ -0.56
Cd44-204ENSMUST00000111190 Rpap1Q80TE0 1409 aa11.57□□□□□ -0.56
Cd44-204ENSMUST00000111190 Pprc1Q6NZN1 1644 aa11.56□□□□□ -0.56
Cd44-204ENSMUST00000111190 Gm14025A2AP89 1413 aa11.55□□□□□ -0.56
Cd44-204ENSMUST00000111190 Abca5Q8K448 1642 aa11.55□□□□□ -0.56
Cd44-204ENSMUST00000111190 Ifnlr1Q8CGK5 535 aa11.54□□□□□ -0.56
Cd44-204ENSMUST00000111190 Neo1P97798 1493 aa11.54□□□□□ -0.56
Cd44-204ENSMUST00000111190 EprsQ8CGC7 1512 aaKnown RBP11.54□□□□□ -0.56
Cd44-204ENSMUST00000111190 UbtfP25976 765 aaKnown RBP11.53□□□□□ -0.56
Cd44-204ENSMUST00000111190 Slx4Q6P1D7 1565 aa11.53□□□□□ -0.56
Cd44-204ENSMUST00000111190 Adamts12Q811B3 1600 aa11.53□□□□□ -0.56
Cd44-204ENSMUST00000111190 Mier1Q5UAK0 511 aa11.52□□□□□ -0.56
Cd44-204ENSMUST00000111190 Chd1P40201 1711 aa11.52□□□□□ -0.57
Cd44-204ENSMUST00000111190 Plekhg3Q4VAC9 1341 aa11.52□□□□□ -0.57
Cd44-204ENSMUST00000111190 Ube2uB1AUC4 352 aa11.52□□□□□ -0.57
Cd44-204ENSMUST00000111190 Dnmt1P13864 1620 aaKnown RBP11.51□□□□□ -0.57
Cd44-204ENSMUST00000111190 Setbp1Q9Z180 1582 aa11.51□□□□□ -0.57
Cd44-204ENSMUST00000111190 Atf5O70191 283 aa11.51□□□□□ -0.57
Cd44-204ENSMUST00000111190 Naip1Q9QWK5 1403 aa11.5□□□□□ -0.57
Cd44-204ENSMUST00000111190 WizO88286 1684 aaKnown RBP11.5□□□□□ -0.57
Cd44-204ENSMUST00000111190 Jph4Q80WT0 628 aa11.5□□□□□ -0.57
Cd44-204ENSMUST00000111190 TchhA0A0B4J1F9 1599 aa11.49□□□□□ -0.57
Cd44-204ENSMUST00000111190 CntlnA2AM05 1397 aa11.49□□□□□ -0.57
Cd44-204ENSMUST00000111190 Abca16E9PWJ7 1678 aa11.49□□□□□ -0.57
Cd44-204ENSMUST00000111190 NefmP08553 848 aa11.49□□□□□ -0.57
Cd44-204ENSMUST00000111190 AI481877A2ALV5 1481 aa11.49□□□□□ -0.57
Cd44-204ENSMUST00000111190 Ncapd3Q6ZQK0 1506 aa11.48□□□□□ -0.57
Cd44-204ENSMUST00000111190 Abcc2Q8VI47 1543 aa11.48□□□□□ -0.57
Cd44-204ENSMUST00000111190 BlmO88700 1416 aa11.47□□□□□ -0.57
Cd44-204ENSMUST00000111190 Ap3b1Q9Z1T1 1105 aa11.47□□□□□ -0.57
Cd44-204ENSMUST00000111190 PxdnQ3UQ28 1475 aa11.47□□□□□ -0.57
Cd44-204ENSMUST00000111190 Fam163aQ8CAA5 168 aa11.46□□□□□ -0.57
Cd44-204ENSMUST00000111190 Gm7298A0A0N4SVU1 1476 aa11.45□□□□□ -0.58
Cd44-204ENSMUST00000111190 Fkbp15Q6P9Q6 1216 aaKnown RBP11.45□□□□□ -0.58
Cd44-204ENSMUST00000111190 Map3k4O08648 1597 aa11.45□□□□□ -0.58
Cd44-204ENSMUST00000111190 Znf219Q6IQX8 726 aa11.43□□□□□ -0.58
Cd44-204ENSMUST00000111190 Arid3cA6PWV5 409 aa11.43□□□□□ -0.58
Cd44-204ENSMUST00000111190 BC005561E9Q5E2 1589 aa11.42□□□□□ -0.58
Cd44-204ENSMUST00000111190 Ak9G3UYQ4 1894 aa11.42□□□□□ -0.58
Cd44-204ENSMUST00000111190 Chrna2Q91X60 512 aa11.42□□□□□ -0.58
Cd44-204ENSMUST00000111190 Igf1rQ60751 1373 aa11.42□□□□□ -0.58
Cd44-204ENSMUST00000111190 Aebp1Q640N1 1128 aa11.39□□□□□ -0.59
Cd44-204ENSMUST00000111190 Arhgef12Q8R4H2 1543 aaKnown RBP11.39□□□□□ -0.59
Cd44-204ENSMUST00000111190 Gcc2Q8CHG3 1679 aa11.38□□□□□ -0.59
Cd44-204ENSMUST00000111190 Gm1043A0A140LJC2 1431 aa11.38□□□□□ -0.59
Cd44-204ENSMUST00000111190 Clasp1Q80TV8 1535 aaKnown RBP11.36□□□□□ -0.59
Cd44-204ENSMUST00000111190 WrnO09053 1401 aa11.34□□□□□ -0.59
Cd44-204ENSMUST00000111190 Rapgef6Q5NCJ1 1609 aa11.33□□□□□ -0.6
Cd44-204ENSMUST00000111190 Kdm5bQ80Y84 1544 aa11.33□□□□□ -0.6
Cd44-204ENSMUST00000111190 Kif27Q7M6Z4 1394 aa11.32□□□□□ -0.6
Cd44-204ENSMUST00000111190 Lmtk2Q3TYD6 1471 aa11.32□□□□□ -0.6
Cd44-204ENSMUST00000111190 Rsph4aQ8BYM7 716 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms