RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Gapvd1Q6PAR5 1458 aa20.2■□□□□ 0.82
Trim50-202ENSMUST00000111180 NrkQ9R0G8 1455 aa20.2■□□□□ 0.82
Trim50-202ENSMUST00000111180 Gpatch8A2A6A1 1505 aa20.16■□□□□ 0.82
Trim50-202ENSMUST00000111180 Arhgap27A2AB59 869 aa20.11■□□□□ 0.81
Trim50-202ENSMUST00000111180 Shroom4Q1W617 1475 aa20.1■□□□□ 0.81
Trim50-202ENSMUST00000111180 Pla2r1Q62028 1487 aa20.1■□□□□ 0.81
Trim50-202ENSMUST00000111180 PtprtQ99M80 1454 aa20.09■□□□□ 0.81
Trim50-202ENSMUST00000111180 Abcc1O35379 1528 aa20.08■□□□□ 0.81
Trim50-202ENSMUST00000111180 CadpsQ80TJ1 1355 aa20.08■□□□□ 0.8
Trim50-202ENSMUST00000111180 Ythdc2B2RR83 1445 aaKnown RBP20.07■□□□□ 0.8
Trim50-202ENSMUST00000111180 SynmQ70IV5 1561 aa20.06■□□□□ 0.8
Trim50-202ENSMUST00000111180 Chd1P40201 1711 aa20.06■□□□□ 0.8
Trim50-202ENSMUST00000111180 Npm2Q80W85 207 aa20.04■□□□□ 0.8
Trim50-202ENSMUST00000111180 Rapgef2Q8CHG7 1496 aa20.03■□□□□ 0.8
Trim50-202ENSMUST00000111180 Soga1E1U8D0 1418 aa20.02■□□□□ 0.8
Trim50-202ENSMUST00000111180 Pprc1Q6NZN1 1644 aa20.01■□□□□ 0.79
Trim50-202ENSMUST00000111180 Gab3Q8BSM5 595 aa19.99■□□□□ 0.79
Trim50-202ENSMUST00000111180 Dnmt1P13864 1620 aaKnown RBP19.97■□□□□ 0.79
Trim50-202ENSMUST00000111180 Abca16E9PWJ7 1678 aa19.96■□□□□ 0.79
Trim50-202ENSMUST00000111180 Ifnlr1Q8CGK5 535 aa19.95■□□□□ 0.78
Trim50-202ENSMUST00000111180 BC005561E9Q5E2 1589 aa19.94■□□□□ 0.78
Trim50-202ENSMUST00000111180 Ppp1r18Q8BQ30 594 aa19.94■□□□□ 0.78
Trim50-202ENSMUST00000111180 Neo1P97798 1493 aa19.94■□□□□ 0.78
Trim50-202ENSMUST00000111180 Abcc2Q8VI47 1543 aa19.91■□□□□ 0.78
Trim50-202ENSMUST00000111180 TchhA0A0B4J1F9 1599 aa19.91■□□□□ 0.78
Trim50-202ENSMUST00000111180 Eif4g1Q6NZJ6 1600 aaKnown RBP19.91■□□□□ 0.78
Trim50-202ENSMUST00000111180 Gm14025A2AP89 1413 aa19.9■□□□□ 0.78
Trim50-202ENSMUST00000111180 Map3k4O08648 1597 aa19.89■□□□□ 0.78
Trim50-202ENSMUST00000111180 WizO88286 1684 aaKnown RBP19.88■□□□□ 0.77
Trim50-202ENSMUST00000111180 PxdnQ3UQ28 1475 aa19.87■□□□□ 0.77
Trim50-202ENSMUST00000111180 Setbp1Q9Z180 1582 aa19.87■□□□□ 0.77
Trim50-202ENSMUST00000111180 Cep162Q6ZQ06 1403 aa19.85■□□□□ 0.77
Trim50-202ENSMUST00000111180 EprsQ8CGC7 1512 aaKnown RBP19.85■□□□□ 0.77
Trim50-202ENSMUST00000111180 Adamts12Q811B3 1600 aa19.84■□□□□ 0.77
Trim50-202ENSMUST00000111180 Map3k1P53349 1493 aa19.83■□□□□ 0.77
Trim50-202ENSMUST00000111180 Fkbp15Q6P9Q6 1216 aaKnown RBP19.83■□□□□ 0.76
Trim50-202ENSMUST00000111180 Mroh2bQ7M6Y6 1581 aa19.82■□□□□ 0.76
Trim50-202ENSMUST00000111180 Ak9G3UYQ4 1894 aa19.81■□□□□ 0.76
Trim50-202ENSMUST00000111180 Jph4Q80WT0 628 aa19.8■□□□□ 0.76
Trim50-202ENSMUST00000111180 Rpap1Q80TE0 1409 aa19.8■□□□□ 0.76
Trim50-202ENSMUST00000111180 Arhgap35Q91YM2 1499 aa19.78■□□□□ 0.76
Trim50-202ENSMUST00000111180 AI481877A2ALV5 1481 aa19.76■□□□□ 0.75
Trim50-202ENSMUST00000111180 Arhgef12Q8R4H2 1543 aaKnown RBP19.75■□□□□ 0.75
Trim50-202ENSMUST00000111180 Carmil1Q6EDY6 1374 aa19.73■□□□□ 0.75
Trim50-202ENSMUST00000111180 Slx4Q6P1D7 1565 aa19.73■□□□□ 0.75
Trim50-202ENSMUST00000111180 Arid3cA6PWV5 409 aa19.7■□□□□ 0.74
Trim50-202ENSMUST00000111180 Gm7298A0A0N4SVU1 1476 aa19.7■□□□□ 0.74
Trim50-202ENSMUST00000111180 WrnO09053 1401 aa19.63■□□□□ 0.73
Trim50-202ENSMUST00000111180 AdgbG3UZ78 1657 aa19.61■□□□□ 0.73
Trim50-202ENSMUST00000111180 Plekhg3Q4VAC9 1341 aa19.61■□□□□ 0.73
Trim50-202ENSMUST00000111180 Abca5Q8K448 1642 aa19.6■□□□□ 0.73
Trim50-202ENSMUST00000111180 Igf1rQ60751 1373 aa19.59■□□□□ 0.73
Trim50-202ENSMUST00000111180 Myt1lP97500 1187 aa19.59■□□□□ 0.73
Trim50-202ENSMUST00000111180 Ttc37F8VPK0 1563 aa19.59■□□□□ 0.73
Trim50-202ENSMUST00000111180 Clasp1Q80TV8 1535 aaKnown RBP19.59■□□□□ 0.73
Trim50-202ENSMUST00000111180 Clip1Q922J3 1391 aa19.58■□□□□ 0.73
Trim50-202ENSMUST00000111180 Polr1aO35134 1717 aaKnown RBP19.57■□□□□ 0.72
Trim50-202ENSMUST00000111180 Plppr3Q7TPB0 716 aa19.55■□□□□ 0.72
Trim50-202ENSMUST00000111180 Mapkbp1Q6NS57 1503 aa19.54■□□□□ 0.72
Trim50-202ENSMUST00000111180 Rrbp1Q99PL5 1605 aaKnown RBP19.51■□□□□ 0.71
Trim50-202ENSMUST00000111180 Lrrc9Q8CDN9 1456 aa19.49■□□□□ 0.71
Trim50-202ENSMUST00000111180 Erich3F6QRE9 1637 aa19.47■□□□□ 0.71
Trim50-202ENSMUST00000111180 Depdc5P61460 1591 aa19.47■□□□□ 0.71
Trim50-202ENSMUST00000111180 Arhgef11Q68FM7 1552 aa19.45■□□□□ 0.7
Trim50-202ENSMUST00000111180 Ankrd26Q811D2 1581 aa19.45■□□□□ 0.7
Trim50-202ENSMUST00000111180 Znf608Q56A10 1511 aa19.44■□□□□ 0.7
Trim50-202ENSMUST00000111180 Kdm5bQ80Y84 1544 aa19.44■□□□□ 0.7
Trim50-202ENSMUST00000111180 Cux1P53564 1515 aa19.43■□□□□ 0.7
Trim50-202ENSMUST00000111180 Arhgap31A6X8Z5 1425 aa19.43■□□□□ 0.7
Trim50-202ENSMUST00000111180 Fyco1Q8VDC1 1437 aa19.43■□□□□ 0.7
Trim50-202ENSMUST00000111180 Eea1Q8BL66 1411 aa19.42■□□□□ 0.7
Trim50-202ENSMUST00000111180 Cul7Q8VE73 1689 aa19.42■□□□□ 0.7
Trim50-202ENSMUST00000111180 Wdr7Q920I9 1489 aa19.41■□□□□ 0.7
Trim50-202ENSMUST00000111180 Zfyve16Q80U44 1528 aa19.39■□□□□ 0.69
Trim50-202ENSMUST00000111180 NhsB1AV60 1647 aa19.37■□□□□ 0.69
Trim50-202ENSMUST00000111180 Alpk3Q924C5 1678 aa19.36■□□□□ 0.69
Trim50-202ENSMUST00000111180 Fndc1E9Q043 1732 aa19.35■□□□□ 0.69
Trim50-202ENSMUST00000111180 Setd5Q5XJV7 1441 aa19.34■□□□□ 0.69
Trim50-202ENSMUST00000111180 Ccdc141E9Q8Q6 1531 aa19.34■□□□□ 0.69
Trim50-202ENSMUST00000111180 Atp10dQ8K2X1 1416 aa19.34■□□□□ 0.69
Trim50-202ENSMUST00000111180 Lmo7E9PYF4 1699 aaKnown RBP19.32■□□□□ 0.68
Trim50-202ENSMUST00000111180 Aebp1Q640N1 1128 aa19.3■□□□□ 0.68
Trim50-202ENSMUST00000111180 Arap1Q4LDD4 1452 aa19.29■□□□□ 0.68
Trim50-202ENSMUST00000111180 Pcf11G3X9Z4 1553 aa19.29■□□□□ 0.68
Trim50-202ENSMUST00000111180 MlecQ6ZQI3 291 aaKnown RBP19.28■□□□□ 0.68
Trim50-202ENSMUST00000111180 Dnajc5gQ8C632 165 aa19.27■□□□□ 0.67
Trim50-202ENSMUST00000111180 Gcc2Q8CHG3 1679 aa19.25■□□□□ 0.67
Trim50-202ENSMUST00000111180 Mroh2aD3Z750 1679 aa19.25■□□□□ 0.67
Trim50-202ENSMUST00000111180 AglF8VPN4 1532 aa19.25■□□□□ 0.67
Trim50-202ENSMUST00000111180 Kif27Q7M6Z4 1394 aa19.25■□□□□ 0.67
Trim50-202ENSMUST00000111180 Ncoa2Q61026 1462 aa19.23■□□□□ 0.67
Trim50-202ENSMUST00000111180 Ap3b1Q9Z1T1 1105 aa19.22■□□□□ 0.67
Trim50-202ENSMUST00000111180 Peg3Q3URU2 1571 aa19.2■□□□□ 0.66
Trim50-202ENSMUST00000111180 Tiam1Q60610 1591 aa19.19■□□□□ 0.66
Trim50-202ENSMUST00000111180 Fancd2Q80V62 1450 aa19.18■□□□□ 0.66
Trim50-202ENSMUST00000111180 Kiaa1210E9Q0C6 1637 aa19.17■□□□□ 0.66
Trim50-202ENSMUST00000111180 BlmO88700 1416 aa19.17■□□□□ 0.66
Trim50-202ENSMUST00000111180 Rapgef6Q5NCJ1 1609 aa19.16■□□□□ 0.66
Trim50-202ENSMUST00000111180 Abca8bQ8K440 1620 aa19.16■□□□□ 0.66
Trim50-202ENSMUST00000111180 Rnf17Q99MV7 1640 aa19.15■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms