RNA–Protein interactions for RNA: ENSMUST00000111089.7

Nefm-202, Transcript of Neurofilament medium polypeptide, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nefm, Length 3,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nefm-202ENSMUST00000111089 Eid3Q3V124 375 aa16.32■□□□□ 0.2
Nefm-202ENSMUST00000111089 Eea1Q8BL66 1411 aa16.3■□□□□ 0.2
Nefm-202ENSMUST00000111089 Phldb1Q6PDH0 1371 aaKnown RBP16.27■□□□□ 0.2
Nefm-202ENSMUST00000111089 Cux2P70298 1426 aa16.26■□□□□ 0.19
Nefm-202ENSMUST00000111089 BlmO88700 1416 aa16.25■□□□□ 0.19
Nefm-202ENSMUST00000111089 Eif5bQ05D44 1216 aaKnown RBP16.23■□□□□ 0.19
Nefm-202ENSMUST00000111089 Wdr62Q3U3T8 1523 aa16.22■□□□□ 0.19
Nefm-202ENSMUST00000111089 PtprkP35822 1457 aa16.17■□□□□ 0.18
Nefm-202ENSMUST00000111089 Stra8P70278 393 aa16.16■□□□□ 0.18
Nefm-202ENSMUST00000111089 Baz1bQ9Z277 1479 aa16.15■□□□□ 0.18
Nefm-202ENSMUST00000111089 Rtl5Q5DTT4 599 aa16.12■□□□□ 0.17
Nefm-202ENSMUST00000111089 NclP09405 707 aaKnown RBP16.11■□□□□ 0.17
Nefm-202ENSMUST00000111089 Calr4Q3TQS0 420 aa16.11■□□□□ 0.17
Nefm-202ENSMUST00000111089 Arhgap35Q91YM2 1499 aa16.11■□□□□ 0.17
Nefm-202ENSMUST00000111089 LrpprcQ6PB66 1392 aaKnown RBP16.09■□□□□ 0.17
Nefm-202ENSMUST00000111089 Shroom4Q1W617 1475 aa16.08■□□□□ 0.17
Nefm-202ENSMUST00000111089 Ppp4r2Q0VGB7 417 aa16.08■□□□□ 0.16
Nefm-202ENSMUST00000111089 Nolc1E9Q5C9 702 aaKnown RBP16.06■□□□□ 0.16
Nefm-202ENSMUST00000111089 Lamc3Q9R0B6 1581 aa16.05■□□□□ 0.16
Nefm-202ENSMUST00000111089 NrkQ9R0G8 1455 aa16.02■□□□□ 0.16
Nefm-202ENSMUST00000111089 Camsap1A2AHC3 1581 aa16.01■□□□□ 0.15
Nefm-202ENSMUST00000111089 4933416C03RikQ3V063 378 aa16■□□□□ 0.15
Nefm-202ENSMUST00000111089 Grin2bQ01097 1482 aa16■□□□□ 0.15
Nefm-202ENSMUST00000111089 Chic2Q9D9G3 165 aa15.99■□□□□ 0.15
Nefm-202ENSMUST00000111089 Dhx29Q6PGC1 1365 aaKnown RBP15.99■□□□□ 0.15
Nefm-202ENSMUST00000111089 Carmil1Q6EDY6 1374 aa15.97■□□□□ 0.15
Nefm-202ENSMUST00000111089 Aebp1Q640N1 1128 aa15.96■□□□□ 0.15
Nefm-202ENSMUST00000111089 TnnQ80Z71 1560 aa15.96■□□□□ 0.14
Nefm-202ENSMUST00000111089 Arap1Q4LDD4 1452 aa15.95■□□□□ 0.14
Nefm-202ENSMUST00000111089 Efcab5A0JP43 1406 aa15.94■□□□□ 0.14
Nefm-202ENSMUST00000111089 Supt16hQ920B9 1047 aa15.93■□□□□ 0.14
Nefm-202ENSMUST00000111089 Hdac5Q9Z2V6 1113 aa15.92■□□□□ 0.14
Nefm-202ENSMUST00000111089 Mroh2bQ7M6Y6 1581 aa15.91■□□□□ 0.14
Nefm-202ENSMUST00000111089 Duox2A2AQ99 1517 aa15.91■□□□□ 0.14
Nefm-202ENSMUST00000111089 Fkbp15Q6P9Q6 1216 aaKnown RBP15.9■□□□□ 0.14
Nefm-202ENSMUST00000111089 Map3k1P53349 1493 aa15.89■□□□□ 0.13
Nefm-202ENSMUST00000111089 Wdr43Q6ZQL4 677 aaKnown RBP15.88■□□□□ 0.13
Nefm-202ENSMUST00000111089 CntlnA2AM05 1397 aa15.88■□□□□ 0.13
Nefm-202ENSMUST00000111089 PogzQ8BZH4 1409 aaKnown RBP15.87■□□□□ 0.13
Nefm-202ENSMUST00000111089 P3h3Q8CG70 732 aa15.86■□□□□ 0.13
Nefm-202ENSMUST00000111089 Rad54l2Q99NG0 1466 aa15.85■□□□□ 0.13
Nefm-202ENSMUST00000111089 Ccer2J3QPU5 274 aa15.85■□□□□ 0.13
Nefm-202ENSMUST00000111089 Arhgap27A2AB59 869 aa15.84■□□□□ 0.13
Nefm-202ENSMUST00000111089 DaxxO35613 739 aa15.83■□□□□ 0.12
Nefm-202ENSMUST00000111089 Arhgef5E9Q7D5 1581 aa15.83■□□□□ 0.12
Nefm-202ENSMUST00000111089 Naip1Q9QWK5 1403 aa15.82■□□□□ 0.12
Nefm-202ENSMUST00000111089 Rpap1Q80TE0 1409 aa15.81■□□□□ 0.12
Nefm-202ENSMUST00000111089 Dnajc5bQ9CQ94 199 aa15.8■□□□□ 0.12
Nefm-202ENSMUST00000111089 Kif27Q7M6Z4 1394 aa15.8■□□□□ 0.12
Nefm-202ENSMUST00000111089 Ncapd3Q6ZQK0 1506 aa15.79■□□□□ 0.12
Nefm-202ENSMUST00000111089 Fyco1Q8VDC1 1437 aa15.79■□□□□ 0.12
Nefm-202ENSMUST00000111089 Slc4a3P16283 1227 aa15.79■□□□□ 0.12
Nefm-202ENSMUST00000111089 Zbtb7cQ8VCZ7 619 aa15.78■□□□□ 0.12
Nefm-202ENSMUST00000111089 Znf710Q3U288 666 aa15.75■□□□□ 0.11
Nefm-202ENSMUST00000111089 Hspa5P20029 655 aaKnown RBP15.74■□□□□ 0.11
Nefm-202ENSMUST00000111089 AqrQ8CFQ3 1481 aaKnown RBP15.72■□□□□ 0.11
Nefm-202ENSMUST00000111089 Mia2Q91ZV0 1396 aa15.72■□□□□ 0.11
Nefm-202ENSMUST00000111089 Tiam1Q60610 1591 aa15.72■□□□□ 0.11
Nefm-202ENSMUST00000111089 NrdcQ8BHG1 1161 aa15.71■□□□□ 0.11
Nefm-202ENSMUST00000111089 Eif4g1Q6NZJ6 1600 aaKnown RBP15.71■□□□□ 0.11
Nefm-202ENSMUST00000111089 Mrc2Q64449 1479 aa15.71■□□□□ 0.11
Nefm-202ENSMUST00000111089 Upf2A2AT37 1269 aaKnown RBP15.71■□□□□ 0.1
Nefm-202ENSMUST00000111089 Thoc2B1AZI6 1594 aaKnown RBP15.71■□□□□ 0.1
Nefm-202ENSMUST00000111089 Ccdc27Q3V036 639 aa15.7■□□□□ 0.1
Nefm-202ENSMUST00000111089 Plcd4Q8K3R3 807 aa15.7■□□□□ 0.1
Nefm-202ENSMUST00000111089 Cux1P53564 1515 aa15.69■□□□□ 0.1
Nefm-202ENSMUST00000111089 Unc13aQ4KUS2 1712 aa15.68■□□□□ 0.1
Nefm-202ENSMUST00000111089 Pak3Q61036 559 aa15.68■□□□□ 0.1
Nefm-202ENSMUST00000111089 Ccnb3Q810T2 1396 aa15.68■□□□□ 0.1
Nefm-202ENSMUST00000111089 Gtf3c3Q3TMP1 882 aa15.67■□□□□ 0.1
Nefm-202ENSMUST00000111089 Pcf11G3X9Z4 1553 aa15.66■□□□□ 0.1
Nefm-202ENSMUST00000111089 Ankrd26Q811D2 1581 aa15.65■□□□□ 0.1
Nefm-202ENSMUST00000111089 Fam135aQ6NS59 1506 aa15.65■□□□□ 0.1
Nefm-202ENSMUST00000111089 Hsp90aa1P07901 733 aaKnown RBP15.64■□□□□ 0.09
Nefm-202ENSMUST00000111089 Irx3P81067 507 aa15.64■□□□□ 0.09
Nefm-202ENSMUST00000111089 SynmQ70IV5 1561 aa15.63■□□□□ 0.09
Nefm-202ENSMUST00000111089 Urb2E9Q7L1 1524 aaKnown RBP15.63■□□□□ 0.09
Nefm-202ENSMUST00000111089 Plb1Q3TTY0 1478 aa15.63■□□□□ 0.09
Nefm-202ENSMUST00000111089 Cabp1Q9JLK7 227 aa15.63■□□□□ 0.09
Nefm-202ENSMUST00000111089 Polr1aO35134 1717 aaKnown RBP15.61■□□□□ 0.09
Nefm-202ENSMUST00000111089 WrnO09053 1401 aa15.61■□□□□ 0.09
Nefm-202ENSMUST00000111089 Mrs2Q5NCE8 434 aa15.61■□□□□ 0.09
Nefm-202ENSMUST00000111089 EprsQ8CGC7 1512 aaKnown RBP15.61■□□□□ 0.09
Nefm-202ENSMUST00000111089 Crocc2F6XLV1 1638 aa15.61■□□□□ 0.09
Nefm-202ENSMUST00000111089 CadpsQ80TJ1 1355 aa15.59■□□□□ 0.09
Nefm-202ENSMUST00000111089 Slx4Q6P1D7 1565 aa15.58■□□□□ 0.08
Nefm-202ENSMUST00000111089 Samd9lQ69Z37 1561 aa15.57■□□□□ 0.08
Nefm-202ENSMUST00000111089 Gm7298A0A0N4SVU1 1476 aa15.57■□□□□ 0.08
Nefm-202ENSMUST00000111089 Mtus2Q3UHD3 1353 aa15.56■□□□□ 0.08
Nefm-202ENSMUST00000111089 Pknox2Q8BG99 474 aa15.56■□□□□ 0.08
Nefm-202ENSMUST00000111089 Sin3aQ60520 1274 aaKnown RBP15.56■□□□□ 0.08
Nefm-202ENSMUST00000111089 Mphosph9A6H5Y1 991 aa15.52■□□□□ 0.08
Nefm-202ENSMUST00000111089 Fhad1A6PWD2 1420 aa15.51■□□□□ 0.07
Nefm-202ENSMUST00000111089 Zbtb4Q5F293 982 aa15.5■□□□□ 0.07
Nefm-202ENSMUST00000111089 AknaQ80VW7 1404 aa15.5■□□□□ 0.07
Nefm-202ENSMUST00000111089 Grin2aP35436 1464 aa15.5■□□□□ 0.07
Nefm-202ENSMUST00000111089 Rgl3Q3UYI5 709 aa15.5■□□□□ 0.07
Nefm-202ENSMUST00000111089 Pkd2O35245 966 aa15.49■□□□□ 0.07
Nefm-202ENSMUST00000111089 3425401B19RikD3Z1D3 1412 aa15.47■□□□□ 0.07
Nefm-202ENSMUST00000111089 Gm13697A2AK42 830 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms