RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 PtprkP35822 1457 aa10.61□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Shroom4Q1W617 1475 aa10.6□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Arap1Q4LDD4 1452 aa10.59□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Frmpd1A2AKB4 1549 aa10.59□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Baz1bQ9Z277 1479 aa10.59□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Slc24a1Q91WD8 1130 aa10.58□□□□□ -0.72
Bdnf-207ENSMUST00000111047 NrkQ9R0G8 1455 aa10.57□□□□□ -0.72
Bdnf-207ENSMUST00000111047 Fam71e1A1L3C1 212 aa10.56□□□□□ -0.72
Bdnf-207ENSMUST00000111047 Map3k1P53349 1493 aa10.54□□□□□ -0.72
Bdnf-207ENSMUST00000111047 Arhgef5E9Q7D5 1581 aa10.54□□□□□ -0.72
Bdnf-207ENSMUST00000111047 Wdr62Q3U3T8 1523 aa10.54□□□□□ -0.72
Bdnf-207ENSMUST00000111047 Cux2P70298 1426 aa10.53□□□□□ -0.72
Bdnf-207ENSMUST00000111047 CntlnA2AM05 1397 aa10.52□□□□□ -0.72
Bdnf-207ENSMUST00000111047 TnnQ80Z71 1560 aa10.52□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Lamc3Q9R0B6 1581 aa10.52□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Carmil1Q6EDY6 1374 aa10.51□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Mia2Q91ZV0 1396 aa10.51□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Phldb1Q6PDH0 1371 aaKnown RBP10.51□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Chic2Q9D9G3 165 aa10.51□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Naip1Q9QWK5 1403 aa10.5□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Camsap1A2AHC3 1581 aa10.5□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Fyco1Q8VDC1 1437 aa10.5□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Grin2bQ01097 1482 aa10.49□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Mroh2bQ7M6Y6 1581 aa10.49□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Hspa5P20029 655 aaKnown RBP10.48□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Aebp1Q640N1 1128 aa10.48□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Eif4g1Q6NZJ6 1600 aaKnown RBP10.48□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Tiam1Q60610 1591 aa10.47□□□□□ -0.73
Bdnf-207ENSMUST00000111047 LrpprcQ6PB66 1392 aaKnown RBP10.47□□□□□ -0.73
Bdnf-207ENSMUST00000111047 Efcab5A0JP43 1406 aa10.45□□□□□ -0.74
Bdnf-207ENSMUST00000111047 Gm13697A2AK42 830 aa10.44□□□□□ -0.74
Bdnf-207ENSMUST00000111047 NrdcQ8BHG1 1161 aa10.43□□□□□ -0.74
Bdnf-207ENSMUST00000111047 Pelp1Q9DBD5 1123 aaKnown RBP10.42□□□□□ -0.74
Bdnf-207ENSMUST00000111047 Hnrnpul2Q00PI9 745 aaKnown RBP10.42□□□□□ -0.74
Bdnf-207ENSMUST00000111047 Eif5bQ05D44 1216 aaKnown RBP10.4□□□□□ -0.74
Bdnf-207ENSMUST00000111047 AqrQ8CFQ3 1481 aaKnown RBP10.39□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Fhad1A6PWD2 1420 aa10.39□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Pcf11G3X9Z4 1553 aa10.38□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Anp32aO35381 247 aa10.37□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Duox2A2AQ99 1517 aa10.37□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Kif27Q7M6Z4 1394 aa10.37□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Ankrd26Q811D2 1581 aa10.37□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Dhx29Q6PGC1 1365 aaKnown RBP10.37□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Rpap1Q80TE0 1409 aa10.36□□□□□ -0.75
Bdnf-207ENSMUST00000111047 PogzQ8BZH4 1409 aaKnown RBP10.36□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Ankrd36D3Z4K0 1415 aa10.36□□□□□ -0.75
Bdnf-207ENSMUST00000111047 SafbD3YXK2 937 aaKnown RBP10.35□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Calr4Q3TQS0 420 aa10.35□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Ccnb3Q810T2 1396 aa10.35□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Vps8Q0P5W1 1427 aa10.34□□□□□ -0.75
Bdnf-207ENSMUST00000111047 Sin3aQ60520 1274 aaKnown RBP10.33□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Slx4Q6P1D7 1565 aa10.33□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Cux1P53564 1515 aa10.33□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Mrs2Q5NCE8 434 aa10.32□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Hdac5Q9Z2V6 1113 aa10.32□□□□□ -0.76
Bdnf-207ENSMUST00000111047 UacaQ8CGB3 1411 aa10.32□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Polr1aO35134 1717 aaKnown RBP10.31□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Rad54l2Q99NG0 1466 aa10.3□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Mphosph9A6H5Y1 991 aa10.3□□□□□ -0.76
Bdnf-207ENSMUST00000111047 TchhA0A0B4J1F9 1599 aa10.3□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Erich3F6QRE9 1637 aa10.29□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Cabp1Q9JLK7 227 aa10.28□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Kdm5bQ80Y84 1544 aa10.28□□□□□ -0.76
Bdnf-207ENSMUST00000111047 3425401B19RikD3Z1D3 1412 aa10.27□□□□□ -0.76
Bdnf-207ENSMUST00000111047 Pkd2O35245 966 aa10.27□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Anp32bQ9EST5 272 aaKnown RBP10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Mtus2Q3UHD3 1353 aa10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 SynmQ70IV5 1561 aa10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Gm7298A0A0N4SVU1 1476 aa10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Urb2E9Q7L1 1524 aaKnown RBP10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Arhgap27A2AB59 869 aa10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Pknox2Q8BG99 474 aa10.26□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Naip2Q9QUK4 1447 aa10.25□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Znf710Q3U288 666 aa10.24□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Zbtb7cQ8VCZ7 619 aa10.24□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Smg6P61406 1418 aaKnown RBP10.24□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Rgl3Q3UYI5 709 aa10.24□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Fkbp15Q6P9Q6 1216 aaKnown RBP10.23□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Ttbk1Q6PCN3 1308 aa10.22□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Rtl5Q5DTT4 599 aa10.22□□□□□ -0.77
Bdnf-207ENSMUST00000111047 EprsQ8CGC7 1512 aaKnown RBP10.22□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Gm1043A0A140LJC2 1431 aa10.21□□□□□ -0.77
Bdnf-207ENSMUST00000111047 A2mQ6GQT1 1474 aa10.21□□□□□ -0.77
Bdnf-207ENSMUST00000111047 Fgd1P52734 960 aa10.21□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Plekhh2Q8C115 1491 aa10.21□□□□□ -0.78
Bdnf-207ENSMUST00000111047 CadpsQ80TJ1 1355 aa10.2□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Ppp4r2Q0VGB7 417 aa10.2□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Lmo7E9PYF4 1699 aaKnown RBP10.2□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Wdr43Q6ZQL4 677 aaKnown RBP10.2□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Usp47Q8BY87 1376 aa10.2□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Wwc2Q6NXJ0 1187 aa10.19□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Unc13aQ4KUS2 1712 aa10.19□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Cwc22Q8C5N3 908 aaKnown RBP10.19□□□□□ -0.78
Bdnf-207ENSMUST00000111047 WrnO09053 1401 aa10.18□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Peg3Q3URU2 1571 aa10.18□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Zbtb4Q5F293 982 aa10.17□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Samd9lQ69Z37 1561 aa10.16□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Gm13695A2AK44 830 aa10.16□□□□□ -0.78
Bdnf-207ENSMUST00000111047 P3h3Q8CG70 732 aa10.16□□□□□ -0.78
Bdnf-207ENSMUST00000111047 Card11Q8CIS0 1159 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms