RNA–Protein interactions for RNA: ENSMUST00000109950.4

Sin3b-202, Transcript of Paired amphipathic helix protein Sin3b, mousemouse

TSL 1 (best) BASIC

Gene Sin3b, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3b-202ENSMUST00000109950 Abcc1O35379 1528 aa37.26■■■■□ 3.56
Sin3b-202ENSMUST00000109950 Ythdc2B2RR83 1445 aaKnown RBP37.19■■■■□ 3.54
Sin3b-202ENSMUST00000109950 Pla2r1Q62028 1487 aa37.17■■■■□ 3.54
Sin3b-202ENSMUST00000109950 Pprc1Q6NZN1 1644 aa37.13■■■■□ 3.53
Sin3b-202ENSMUST00000109950 Shroom4Q1W617 1475 aa37.11■■■■□ 3.53
Sin3b-202ENSMUST00000109950 Chd1P40201 1711 aa37.1■■■■□ 3.53
Sin3b-202ENSMUST00000109950 Rapgef2Q8CHG7 1496 aa37.08■■■■□ 3.53
Sin3b-202ENSMUST00000109950 Gpatch8A2A6A1 1505 aa37.08■■■■□ 3.53
Sin3b-202ENSMUST00000109950 CadpsQ80TJ1 1355 aa37.07■■■■□ 3.53
Sin3b-202ENSMUST00000109950 Chic1Q8CBW7 227 aa37.04■■■■□ 3.52
Sin3b-202ENSMUST00000109950 SynmQ70IV5 1561 aa37.04■■■■□ 3.52
Sin3b-202ENSMUST00000109950 Soga1E1U8D0 1418 aa36.95■■■■□ 3.51
Sin3b-202ENSMUST00000109950 Dnmt1P13864 1620 aaKnown RBP36.94■■■■□ 3.5
Sin3b-202ENSMUST00000109950 Arhgap27A2AB59 869 aa36.89■■■■□ 3.5
Sin3b-202ENSMUST00000109950 Neo1P97798 1493 aa36.88■■■■□ 3.49
Sin3b-202ENSMUST00000109950 Zeb1Q64318 1117 aa36.86■■■■□ 3.49
Sin3b-202ENSMUST00000109950 Setbp1Q9Z180 1582 aa36.85■■■■□ 3.49
Sin3b-202ENSMUST00000109950 Abcc2Q8VI47 1543 aa36.83■■■■□ 3.49
Sin3b-202ENSMUST00000109950 Abca16E9PWJ7 1678 aa36.82■■■■□ 3.48
Sin3b-202ENSMUST00000109950 BC005561E9Q5E2 1589 aa36.81■■■■□ 3.48
Sin3b-202ENSMUST00000109950 Ppp1r18Q8BQ30 594 aa36.79■■■■□ 3.48
Sin3b-202ENSMUST00000109950 PxdnQ3UQ28 1475 aa36.75■■■■□ 3.47
Sin3b-202ENSMUST00000109950 Map3k4O08648 1597 aa36.75■■■■□ 3.47
Sin3b-202ENSMUST00000109950 WizO88286 1684 aaKnown RBP36.75■■■■□ 3.47
Sin3b-202ENSMUST00000109950 Gm14025A2AP89 1413 aa36.75■■■■□ 3.47
Sin3b-202ENSMUST00000109950 TchhA0A0B4J1F9 1599 aa36.74■■■■□ 3.47
Sin3b-202ENSMUST00000109950 Ak9G3UYQ4 1894 aa36.71■■■■□ 3.47
Sin3b-202ENSMUST00000109950 AI481877A2ALV5 1481 aa36.65■■■■□ 3.46
Sin3b-202ENSMUST00000109950 Ifnlr1Q8CGK5 535 aa36.62■■■■□ 3.45
Sin3b-202ENSMUST00000109950 Adamts12Q811B3 1600 aa36.61■■■■□ 3.45
Sin3b-202ENSMUST00000109950 EprsQ8CGC7 1512 aaKnown RBP36.6■■■■□ 3.45
Sin3b-202ENSMUST00000109950 Mroh2bQ7M6Y6 1581 aa36.6■■■■□ 3.45
Sin3b-202ENSMUST00000109950 Eif4g1Q6NZJ6 1600 aaKnown RBP36.53■■■■□ 3.44
Sin3b-202ENSMUST00000109950 Arhgef12Q8R4H2 1543 aaKnown RBP36.51■■■■□ 3.44
Sin3b-202ENSMUST00000109950 Slx4Q6P1D7 1565 aa36.5■■■■□ 3.43
Sin3b-202ENSMUST00000109950 Npm2Q80W85 207 aa36.43■■■■□ 3.42
Sin3b-202ENSMUST00000109950 Jph4Q80WT0 628 aa36.41■■■■□ 3.42
Sin3b-202ENSMUST00000109950 Plekhg3Q4VAC9 1341 aa36.39■■■■□ 3.42
Sin3b-202ENSMUST00000109950 Rpap1Q80TE0 1409 aa36.39■■■■□ 3.42
Sin3b-202ENSMUST00000109950 Carmil1Q6EDY6 1374 aa36.37■■■■□ 3.41
Sin3b-202ENSMUST00000109950 Fkbp15Q6P9Q6 1216 aaKnown RBP36.35■■■■□ 3.41
Sin3b-202ENSMUST00000109950 Map3k1P53349 1493 aa36.34■■■■□ 3.41
Sin3b-202ENSMUST00000109950 Clasp1Q80TV8 1535 aaKnown RBP36.32■■■■□ 3.4
Sin3b-202ENSMUST00000109950 AdgbG3UZ78 1657 aa36.27■■■■□ 3.4
Sin3b-202ENSMUST00000109950 Ttc37F8VPK0 1563 aa36.27■■■■□ 3.4
Sin3b-202ENSMUST00000109950 Arid3cA6PWV5 409 aa36.26■■■■□ 3.4
Sin3b-202ENSMUST00000109950 Gm7298A0A0N4SVU1 1476 aa36.25■■■■□ 3.39
Sin3b-202ENSMUST00000109950 Mapkbp1Q6NS57 1503 aa36.21■■■■□ 3.39
Sin3b-202ENSMUST00000109950 Arhgap35Q91YM2 1499 aa36.2■■■■□ 3.39
Sin3b-202ENSMUST00000109950 Depdc5P61460 1591 aa36.14■■■■□ 3.38
Sin3b-202ENSMUST00000109950 Abca5Q8K448 1642 aa36.12■■■■□ 3.37
Sin3b-202ENSMUST00000109950 Lrrc9Q8CDN9 1456 aa36.11■■■■□ 3.37
Sin3b-202ENSMUST00000109950 Igf1rQ60751 1373 aa36.08■■■■□ 3.37
Sin3b-202ENSMUST00000109950 WrnO09053 1401 aa36.07■■■■□ 3.36
Sin3b-202ENSMUST00000109950 Arhgef11Q68FM7 1552 aa36.06■■■■□ 3.36
Sin3b-202ENSMUST00000109950 Znf608Q56A10 1511 aa36.05■■■■□ 3.36
Sin3b-202ENSMUST00000109950 Plppr3Q7TPB0 716 aa36.03■■■■□ 3.36
Sin3b-202ENSMUST00000109950 Polr1aO35134 1717 aaKnown RBP36.03■■■■□ 3.36
Sin3b-202ENSMUST00000109950 Rrbp1Q99PL5 1605 aaKnown RBP36■■■■□ 3.35
Sin3b-202ENSMUST00000109950 Kdm5bQ80Y84 1544 aa35.99■■■■□ 3.35
Sin3b-202ENSMUST00000109950 Zfyve16Q80U44 1528 aa35.98■■■■□ 3.35
Sin3b-202ENSMUST00000109950 Alpk3Q924C5 1678 aa35.97■■■■□ 3.35
Sin3b-202ENSMUST00000109950 Gab3Q8BSM5 595 aa35.94■■■■□ 3.34
Sin3b-202ENSMUST00000109950 Fndc1E9Q043 1732 aa35.94■■■■□ 3.34
Sin3b-202ENSMUST00000109950 Clip1Q922J3 1391 aa35.92■■■■□ 3.34
Sin3b-202ENSMUST00000109950 Wdr7Q920I9 1489 aa35.9■■■■□ 3.34
Sin3b-202ENSMUST00000109950 Cux1P53564 1515 aa35.88■■■■□ 3.33
Sin3b-202ENSMUST00000109950 HrcG5E8J6 738 aa35.88■■■■□ 3.33
Sin3b-202ENSMUST00000109950 Dnajc5gQ8C632 165 aa35.86■■■■□ 3.33
Sin3b-202ENSMUST00000109950 Cep162Q6ZQ06 1403 aa35.83■■■■□ 3.33
Sin3b-202ENSMUST00000109950 Fyco1Q8VDC1 1437 aa35.79■■■■□ 3.32
Sin3b-202ENSMUST00000109950 Cul7Q8VE73 1689 aa35.77■■■■□ 3.32
Sin3b-202ENSMUST00000109950 NhsB1AV60 1647 aa35.76■■■■□ 3.32
Sin3b-202ENSMUST00000109950 Arhgap31A6X8Z5 1425 aa35.74■■■■□ 3.31
Sin3b-202ENSMUST00000109950 Atp10dQ8K2X1 1416 aa35.69■■■■□ 3.3
Sin3b-202ENSMUST00000109950 Ccdc141E9Q8Q6 1531 aa35.65■■■■□ 3.3
Sin3b-202ENSMUST00000109950 AglF8VPN4 1532 aa35.64■■■■□ 3.3
Sin3b-202ENSMUST00000109950 MlecQ6ZQI3 291 aaKnown RBP35.63■■■■□ 3.29
Sin3b-202ENSMUST00000109950 Myt1lP97500 1187 aa35.58■■■■□ 3.29
Sin3b-202ENSMUST00000109950 Mroh2aD3Z750 1679 aa35.49■■■■□ 3.27
Sin3b-202ENSMUST00000109950 Gcc2Q8CHG3 1679 aa35.49■■■■□ 3.27
Sin3b-202ENSMUST00000109950 Rnf17Q99MV7 1640 aa35.46■■■■□ 3.27
Sin3b-202ENSMUST00000109950 Ankrd26Q811D2 1581 aa35.43■■■■□ 3.26
Sin3b-202ENSMUST00000109950 Cyb5rlB1AS42 316 aa35.39■■■■□ 3.26
Sin3b-202ENSMUST00000109950 Aebp1Q640N1 1128 aa35.39■■■■□ 3.26
Sin3b-202ENSMUST00000109950 A2mQ6GQT1 1474 aa35.39■■■■□ 3.26
Sin3b-202ENSMUST00000109950 BlmO88700 1416 aa35.39■■■■□ 3.26
Sin3b-202ENSMUST00000109950 Abca8bQ8K440 1620 aa35.38■■■■□ 3.25
Sin3b-202ENSMUST00000109950 Kiaa1210E9Q0C6 1637 aa35.35■■■■□ 3.25
Sin3b-202ENSMUST00000109950 Ncoa2Q61026 1462 aa35.35■■■■□ 3.25
Sin3b-202ENSMUST00000109950 Fancd2Q80V62 1450 aa35.35■■■■□ 3.25
Sin3b-202ENSMUST00000109950 Kdm6bQ5NCY0 1641 aa35.35■■■■□ 3.25
Sin3b-202ENSMUST00000109950 Rapgef6Q5NCJ1 1609 aa35.33■■■■□ 3.25
Sin3b-202ENSMUST00000109950 Brwd3A2AHJ4 1799 aa35.3■■■■□ 3.24
Sin3b-202ENSMUST00000109950 Kif27Q7M6Z4 1394 aa35.28■■■■□ 3.24
Sin3b-202ENSMUST00000109950 Arap1Q4LDD4 1452 aa35.22■■■■□ 3.23
Sin3b-202ENSMUST00000109950 Naip2Q9QUK4 1447 aa35.21■■■■□ 3.23
Sin3b-202ENSMUST00000109950 Magi1Q6RHR9 1471 aa35.2■■■■□ 3.23
Sin3b-202ENSMUST00000109950 Setd5Q5XJV7 1441 aa35.17■■■■□ 3.22
Sin3b-202ENSMUST00000109950 Prex2Q3LAC4 1598 aa35.13■■■■□ 3.21
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms