RNA–Protein interactions for RNA: ENSMUST00000109111.1

Clk4-202, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 2 BASIC

Gene Clk4, Length 1,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-202ENSMUST00000109111 St18Q80TY4 1045 aa12.81□□□□□ -0.36
Clk4-202ENSMUST00000109111 ZxdbA2CE44 873 aa12.76□□□□□ -0.37
Clk4-202ENSMUST00000109111 Tshz2Q68FE9 1030 aa12.76□□□□□ -0.37
Clk4-202ENSMUST00000109111 Tcf3P15806 651 aa12.75□□□□□ -0.37
Clk4-202ENSMUST00000109111 CrebzfQ91ZR3 358 aa12.75□□□□□ -0.37
Clk4-202ENSMUST00000109111 Hmx1O70218 332 aa12.71□□□□□ -0.37
Clk4-202ENSMUST00000109111 Lce6aD3YV94 81 aa12.64□□□□□ -0.39
Clk4-202ENSMUST00000109111 Scarf1Q5ND28 820 aa12.54□□□□□ -0.4
Clk4-202ENSMUST00000109111 Znf516Q7TSH3 1157 aa12.54□□□□□ -0.4
Clk4-202ENSMUST00000109111 Gm45233A0A0N4SVE0 221 aa12.54□□□□□ -0.4
Clk4-202ENSMUST00000109111 EdaraddQ8VHX2 208 aa12.53□□□□□ -0.4
Clk4-202ENSMUST00000109111 PygbQ8CI94 843 aaKnown RBP12.51□□□□□ -0.41
Clk4-202ENSMUST00000109111 Fam181bQ80VF6 417 aa12.46□□□□□ -0.41
Clk4-202ENSMUST00000109111 Zbtb7bQ64321 544 aa12.43□□□□□ -0.42
Clk4-202ENSMUST00000109111 MycnP03966 462 aaKnown RBP12.38□□□□□ -0.43
Clk4-202ENSMUST00000109111 Pde4dQ01063 747 aa12.34□□□□□ -0.43
Clk4-202ENSMUST00000109111 Atad2Q8CDM1 1040 aa12.34□□□□□ -0.43
Clk4-202ENSMUST00000109111 Pdap1Q3UHX2 181 aaKnown RBP12.33□□□□□ -0.44
Clk4-202ENSMUST00000109111 Hdac5Q9Z2V6 1113 aa12.33□□□□□ -0.44
Clk4-202ENSMUST00000109111 Axin1O35625 863 aa12.3□□□□□ -0.44
Clk4-202ENSMUST00000109111 Repin1Q5U4E2 545 aa12.28□□□□□ -0.44
Clk4-202ENSMUST00000109111 ElnP54320 860 aa12.23□□□□□ -0.45
Clk4-202ENSMUST00000109111 Kank4Q6P9J5 1016 aa12.23□□□□□ -0.45
Clk4-202ENSMUST00000109111 Fam117bQ3U3E2 584 aa12.22□□□□□ -0.45
Clk4-202ENSMUST00000109111 Arhgef1Q61210 920 aaKnown RBP12.22□□□□□ -0.45
Clk4-202ENSMUST00000109111 Ndufv2Q9D6J6 248 aa12.22□□□□□ -0.45
Clk4-202ENSMUST00000109111 Gm13697A2AK42 830 aa12.21□□□□□ -0.45
Clk4-202ENSMUST00000109111 Thap8E9Q695 213 aa12.19□□□□□ -0.46
Clk4-202ENSMUST00000109111 Prim1P20664 417 aa12.18□□□□□ -0.46
Clk4-202ENSMUST00000109111 Znf579Q80VM4 562 aa12.17□□□□□ -0.46
Clk4-202ENSMUST00000109111 Sall2Q9QX96 1004 aa12.17□□□□□ -0.46
Clk4-202ENSMUST00000109111 Dkk1O54908 272 aa12.12□□□□□ -0.47
Clk4-202ENSMUST00000109111 Irx5Q9JKQ4 484 aa12.12□□□□□ -0.47
Clk4-202ENSMUST00000109111 Tulp1Q9Z273 543 aa12.12□□□□□ -0.47
Clk4-202ENSMUST00000109111 C1qbpO35658 278 aa12.1□□□□□ -0.47
Clk4-202ENSMUST00000109111 Pak3Q61036 559 aa12.1□□□□□ -0.47
Clk4-202ENSMUST00000109111 Rnf166Q3U9F6 237 aa12.08□□□□□ -0.48
Clk4-202ENSMUST00000109111 Bclaf1Q8K019 919 aaKnown RBP12.08□□□□□ -0.48
Clk4-202ENSMUST00000109111 Msh5Q9QUM7 833 aa12.07□□□□□ -0.48
Clk4-202ENSMUST00000109111 Adnp2Q8CHC8 1165 aaKnown RBP12.06□□□□□ -0.48
Clk4-202ENSMUST00000109111 Jph4Q80WT0 628 aa12.05□□□□□ -0.48
Clk4-202ENSMUST00000109111 Ier5lQ99J55 406 aa12.03□□□□□ -0.48
Clk4-202ENSMUST00000109111 Chrm1P12657 460 aa12□□□□□ -0.49
Clk4-202ENSMUST00000109111 Ube2uB1AUC4 352 aa11.98□□□□□ -0.49
Clk4-202ENSMUST00000109111 Myt1lP97500 1187 aa11.96□□□□□ -0.49
Clk4-202ENSMUST00000109111 Ano8Q6PB70 1060 aa11.94□□□□□ -0.5
Clk4-202ENSMUST00000109111 PsdQ5DTT2 1024 aa11.94□□□□□ -0.5
Clk4-202ENSMUST00000109111 Fndc3aQ8BX90 1198 aa11.94□□□□□ -0.5
Clk4-202ENSMUST00000109111 RragcQ99K70 398 aa11.94□□□□□ -0.5
Clk4-202ENSMUST00000109111 Smpd1Q04519 627 aa11.93□□□□□ -0.5
Clk4-202ENSMUST00000109111 Spock2Q9ER58 423 aa11.86□□□□□ -0.51
Clk4-202ENSMUST00000109111 Pcdhb17Q91VD8 799 aa11.85□□□□□ -0.51
Clk4-202ENSMUST00000109111 Setdb2Q8C267 713 aa11.8□□□□□ -0.52
Clk4-202ENSMUST00000109111 Evi5P97366 809 aa11.78□□□□□ -0.52
Clk4-202ENSMUST00000109111 Gga1Q8R0H9 635 aa11.78□□□□□ -0.52
Clk4-202ENSMUST00000109111 Actn4P57780 912 aaKnown RBP11.72□□□□□ -0.53
Clk4-202ENSMUST00000109111 Ferd3lQ923Z4 168 aa11.72□□□□□ -0.53
Clk4-202ENSMUST00000109111 Scnn1bQ9WU38 638 aa11.72□□□□□ -0.53
Clk4-202ENSMUST00000109111 Krtap4-2B1AQ85 167 aa11.66□□□□□ -0.54
Clk4-202ENSMUST00000109111 E9Q0B3 247 aa11.66□□□□□ -0.54
Clk4-202ENSMUST00000109111 Ecm2Q5FW85 670 aa11.6□□□□□ -0.55
Clk4-202ENSMUST00000109111 Fkbp4P30416 458 aa11.58□□□□□ -0.56
Clk4-202ENSMUST00000109111 Ppp6r1Q7TSI3 856 aa11.58□□□□□ -0.56
Clk4-202ENSMUST00000109111 TimelessQ9R1X4 1197 aa11.57□□□□□ -0.56
Clk4-202ENSMUST00000109111 Ankrd65F6YK91 380 aa11.55□□□□□ -0.56
Clk4-202ENSMUST00000109111 Gm11939A2A592 99 aa11.53□□□□□ -0.56
Clk4-202ENSMUST00000109111 Hoxa2P31245 372 aa11.52□□□□□ -0.56
Clk4-202ENSMUST00000109111 Pdzrn4E9PUZ9 1014 aa11.51□□□□□ -0.57
Clk4-202ENSMUST00000109111 Dnm1lQ8K1M6 742 aa11.51□□□□□ -0.57
Clk4-202ENSMUST00000109111 Nap1l5Q9JJF0 156 aa11.51□□□□□ -0.57
Clk4-202ENSMUST00000109111 Apba1B2RUJ5 842 aa11.49□□□□□ -0.57
Clk4-202ENSMUST00000109111 Hyal3Q8VEI3 412 aa11.49□□□□□ -0.57
Clk4-202ENSMUST00000109111 Gm36176A0A1W2P8D5 158 aa11.48□□□□□ -0.57
Clk4-202ENSMUST00000109111 Gabbr2Q80T41 940 aa11.46□□□□□ -0.57
Clk4-202ENSMUST00000109111 Fmr1nbQ80ZA7 238 aa11.46□□□□□ -0.57
Clk4-202ENSMUST00000109111 Tox2A2A472 547 aa11.44□□□□□ -0.58
Clk4-202ENSMUST00000109111 Kdm2aP59997 1161 aa11.43□□□□□ -0.58
Clk4-202ENSMUST00000109111 Suz12Q80U70 741 aaKnown RBP11.43□□□□□ -0.58
Clk4-202ENSMUST00000109111 Otop3Q80UF9 577 aa11.43□□□□□ -0.58
Clk4-202ENSMUST00000109111 Pbx2O35984 430 aa11.4□□□□□ -0.58
Clk4-202ENSMUST00000109111 Saxo1B1AXP3 476 aa11.39□□□□□ -0.59
Clk4-202ENSMUST00000109111 Lce1mQ9CR91 182 aa11.39□□□□□ -0.59
Clk4-202ENSMUST00000109111 Zbtb22Q9Z0G7 638 aa11.39□□□□□ -0.59
Clk4-202ENSMUST00000109111 Myt1Q8CFC2 1127 aa11.38□□□□□ -0.59
Clk4-202ENSMUST00000109111 Cypt1Q8CH20 168 aa11.38□□□□□ -0.59
Clk4-202ENSMUST00000109111 Stk3Q9JI10 497 aa11.38□□□□□ -0.59
Clk4-202ENSMUST00000109111 Neurod1Q60867 357 aa11.37□□□□□ -0.59
Clk4-202ENSMUST00000109111 Sptlc1O35704 473 aa11.35□□□□□ -0.59
Clk4-202ENSMUST00000109111 Onecut3Q8K557 490 aa11.35□□□□□ -0.59
Clk4-202ENSMUST00000109111 A0A1Y7VJH8 109 aa11.34□□□□□ -0.59
Clk4-202ENSMUST00000109111 Fbxo31Q3TQF0 507 aa11.32□□□□□ -0.6
Clk4-202ENSMUST00000109111 Rsph6aQ8CDR2 708 aa11.31□□□□□ -0.6
Clk4-202ENSMUST00000109111 Mnx1Q9QZW9 404 aa11.31□□□□□ -0.6
Clk4-202ENSMUST00000109111 Lhx6Q9R1R0 363 aa11.3□□□□□ -0.6
Clk4-202ENSMUST00000109111 Stk24Q99KH8 431 aa11.26□□□□□ -0.61
Clk4-202ENSMUST00000109111 Znf354bQ9QXT9 601 aa11.26□□□□□ -0.61
Clk4-202ENSMUST00000109111 Emid1Q91VF5 444 aa11.26□□□□□ -0.61
Clk4-202ENSMUST00000109111 Slc4a2P13808 1237 aaKnown RBP11.25□□□□□ -0.61
Clk4-202ENSMUST00000109111 A930017K11RikE0CXQ2 571 aa11.24□□□□□ -0.61
Clk4-202ENSMUST00000109111 Ufsp1Q9CZP0 217 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms