RNA–Protein interactions for RNA: ENSMUST00000108363.7

Sptbn4-203, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-203ENSMUST00000108363 Rad21Q61550 635 aaKnown RBP21.33■■□□□ 1.01
Sptbn4-203ENSMUST00000108363 Hspa5P20029 655 aaKnown RBP21.32■■□□□ 1
Sptbn4-203ENSMUST00000108363 Gm13697A2AK42 830 aa21.3■■□□□ 1
Sptbn4-203ENSMUST00000108363 Upf2A2AT37 1269 aaKnown RBP21.28■■□□□ 1
Sptbn4-203ENSMUST00000108363 Smarca2Q6DIC0 1577 aa21.28■■□□□ 1
Sptbn4-203ENSMUST00000108363 Ofd1Q80Z25 1017 aa21.28■■□□□ 1
Sptbn4-203ENSMUST00000108363 Ccdc9Q8VC31 543 aaKnown RBP21.27■■□□□ 1
Sptbn4-203ENSMUST00000108363 Ccdc27Q3V036 639 aa21.26■□□□□ 0.99
Sptbn4-203ENSMUST00000108363 Nlrp6Q91WS2 869 aa21.23■□□□□ 0.99
Sptbn4-203ENSMUST00000108363 Supt16hQ920B9 1047 aa21.21■□□□□ 0.99
Sptbn4-203ENSMUST00000108363 Prdm10Q3UTQ7 1184 aa21.2■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Crybg2B7ZCC2 1516 aa21.19■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Fmn1Q05860 1466 aa21.18■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Polr3glQ8R0C0 218 aa21.17■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Sin3aQ60520 1274 aaKnown RBP21.17■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Slc4a3P16283 1227 aa21.16■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Rgl3Q3UYI5 709 aa21.16■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Cecr2E9Q2Z1 1453 aa21.16■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Wwc2Q6NXJ0 1187 aa21.15■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 CanxP35564 591 aaKnown RBP21.14■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Kif15Q6P9L6 1387 aa21.14■□□□□ 0.98
Sptbn4-203ENSMUST00000108363 Erich6D3Z6S9 713 aa21.14■□□□□ 0.97
Sptbn4-203ENSMUST00000108363 Nolc1E9Q5C9 702 aaKnown RBP21.14■□□□□ 0.97
Sptbn4-203ENSMUST00000108363 Rapgef2Q8CHG7 1496 aa21.11■□□□□ 0.97
Sptbn4-203ENSMUST00000108363 Mia2Q91ZV0 1396 aa21.11■□□□□ 0.97
Sptbn4-203ENSMUST00000108363 CftrP26361 1476 aa21.09■□□□□ 0.97
Sptbn4-203ENSMUST00000108363 ScribQ80U72 1612 aa21.09■□□□□ 0.97
Sptbn4-203ENSMUST00000108363 Baz1bQ9Z277 1479 aa21.07■□□□□ 0.96
Sptbn4-203ENSMUST00000108363 Ubl4bQ9CQ84 188 aa21.07■□□□□ 0.96
Sptbn4-203ENSMUST00000108363 Fkbp15Q6P9Q6 1216 aaKnown RBP21.06■□□□□ 0.96
Sptbn4-203ENSMUST00000108363 Synj1Q8CHC4 1574 aa21.04■□□□□ 0.96
Sptbn4-203ENSMUST00000108363 Sycp2Q9CUU3 1500 aa21.02■□□□□ 0.96
Sptbn4-203ENSMUST00000108363 Grwd1Q810D6 446 aaKnown RBP20.98■□□□□ 0.95
Sptbn4-203ENSMUST00000108363 Exoc6Q8R313 802 aa20.98■□□□□ 0.95
Sptbn4-203ENSMUST00000108363 Ccdc18Q640L5 1455 aa20.97■□□□□ 0.95
Sptbn4-203ENSMUST00000108363 Cwc22Q8C5N3 908 aaKnown RBP20.96■□□□□ 0.95
Sptbn4-203ENSMUST00000108363 Card11Q8CIS0 1159 aa20.96■□□□□ 0.95
Sptbn4-203ENSMUST00000108363 Tcerg1Q8CGF7 1100 aaKnown RBP20.95■□□□□ 0.94
Sptbn4-203ENSMUST00000108363 Trim30dE9PWL0 497 aa20.95■□□□□ 0.94
Sptbn4-203ENSMUST00000108363 Irx3P81067 507 aa20.94■□□□□ 0.94
Sptbn4-203ENSMUST00000108363 Hsp90ab1P11499 724 aaKnown RBP20.9■□□□□ 0.94
Sptbn4-203ENSMUST00000108363 Rangap1P46061 589 aaKnown RBP20.87■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Apbb1Q9QXJ1 710 aa20.87■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Znf710Q3U288 666 aa20.86■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 B4galnt3Q6L8S8 986 aa20.86■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Dbr1Q923B1 550 aa20.86■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Ifnlr1Q8CGK5 535 aa20.85■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Arhgap35Q91YM2 1499 aa20.85■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Ipo9Q91YE6 1041 aa20.84■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Smg6P61406 1418 aaKnown RBP20.84■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Hdac5Q9Z2V6 1113 aa20.83■□□□□ 0.93
Sptbn4-203ENSMUST00000108363 Pkd2O35245 966 aa20.83■□□□□ 0.92
Sptbn4-203ENSMUST00000108363 Gm13695A2AK44 830 aa20.81■□□□□ 0.92
Sptbn4-203ENSMUST00000108363 Fyco1Q8VDC1 1437 aa20.81■□□□□ 0.92
Sptbn4-203ENSMUST00000108363 Clstn2Q9ER65 966 aa20.8■□□□□ 0.92
Sptbn4-203ENSMUST00000108363 Ppm1gQ61074 542 aa20.78■□□□□ 0.92
Sptbn4-203ENSMUST00000108363 Mphosph9A6H5Y1 991 aa20.76■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Aebp1Q640N1 1128 aa20.76■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 PrkcshO08795 521 aa20.75■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Trim26Q99PN3 545 aa20.74■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 CntlnA2AM05 1397 aa20.74■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Rundc1Q0VDN7 615 aa20.73■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Mtus2Q3UHD3 1353 aa20.73■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Atp1b4Q99ME6 356 aa20.72■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Neurod2Q62414 383 aa20.72■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 DekQ7TNV0 380 aaKnown RBP20.71■□□□□ 0.91
Sptbn4-203ENSMUST00000108363 Htatsf1Q8BGC0 757 aa20.69■□□□□ 0.9
Sptbn4-203ENSMUST00000108363 Vsig10D3YX43 558 aa20.69■□□□□ 0.9
Sptbn4-203ENSMUST00000108363 Ncapd3Q6ZQK0 1506 aa20.66■□□□□ 0.9
Sptbn4-203ENSMUST00000108363 Cabp1Q9JLK7 227 aa20.66■□□□□ 0.9
Sptbn4-203ENSMUST00000108363 ChgaP26339 463 aaKnown RBP20.64■□□□□ 0.9
Sptbn4-203ENSMUST00000108363 Chmp5Q9D7S9 219 aa20.63■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Arid4bA2CG63 1314 aaKnown RBP20.63■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Kdm2aP59997 1161 aa20.63■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Spryd3E9Q9B3 442 aa20.63■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Trim44Q9QXA7 346 aa20.63■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Cttnbp2B9EJA2 1648 aa20.62■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Dnai1Q8C0M8 701 aa20.62■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Kif27Q7M6Z4 1394 aa20.62■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Zscan21Q07231 555 aa20.62■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Ercc6F8VPZ5 1481 aa20.61■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Rwdd1Q9CQK7 243 aa20.61■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Mbd3Q9Z2D8 285 aaKnown RBP20.6■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Gtf3c3Q3TMP1 882 aa20.6■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Mak16Q8BGS0 296 aaKnown RBP20.59■□□□□ 0.89
Sptbn4-203ENSMUST00000108363 Mroh3A0A1D5RM54 893 aa20.57■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Armcx1Q9CX83 456 aa20.57■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Plcb2A3KGF7 1181 aa20.56■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Arhgap27A2AB59 869 aa20.55■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Cc2d2aQ8CFW7 1633 aa20.55■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 EspnQ9ET47 871 aa20.55■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Trak1Q6PD31 939 aa20.54■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Top2aQ01320 1528 aaKnown RBP20.53■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Pak3Q61036 559 aa20.52■□□□□ 0.88
Sptbn4-203ENSMUST00000108363 Rrp7aQ9D1C9 280 aaKnown RBP20.51■□□□□ 0.87
Sptbn4-203ENSMUST00000108363 Usp47Q8BY87 1376 aa20.49■□□□□ 0.87
Sptbn4-203ENSMUST00000108363 Carmil1Q6EDY6 1374 aa20.49■□□□□ 0.87
Sptbn4-203ENSMUST00000108363 AU015836B2RUM3 263 aa20.49■□□□□ 0.87
Sptbn4-203ENSMUST00000108363 Smarca4Q3TKT4 1613 aaKnown RBP20.49■□□□□ 0.87
Sptbn4-203ENSMUST00000108363 Ccnb3Q810T2 1396 aa20.49■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms