RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 NefmP08553 848 aa27.98■■■□□ 2.07
Trim47-202ENSMUST00000106441 Pla2r1Q62028 1487 aa27.94■■■□□ 2.06
Trim47-202ENSMUST00000106441 Cc2d2bA0A286YDU8 1405 aa27.92■■■□□ 2.06
Trim47-202ENSMUST00000106441 Gpatch8A2A6A1 1505 aa27.89■■■□□ 2.05
Trim47-202ENSMUST00000106441 AqrQ8CFQ3 1481 aaKnown RBP27.87■■■□□ 2.05
Trim47-202ENSMUST00000106441 Myt1lP97500 1187 aa27.84■■■□□ 2.05
Trim47-202ENSMUST00000106441 Carmil1Q6EDY6 1374 aa27.83■■■□□ 2.05
Trim47-202ENSMUST00000106441 Clip1Q922J3 1391 aa27.77■■■□□ 2.04
Trim47-202ENSMUST00000106441 Mier1Q5UAK0 511 aa27.76■■■□□ 2.03
Trim47-202ENSMUST00000106441 EprsQ8CGC7 1512 aaKnown RBP27.72■■■□□ 2.03
Trim47-202ENSMUST00000106441 Polr1aO35134 1717 aaKnown RBP27.67■■■□□ 2.02
Trim47-202ENSMUST00000106441 Adamts12Q811B3 1600 aa27.66■■■□□ 2.02
Trim47-202ENSMUST00000106441 WizO88286 1684 aaKnown RBP27.66■■■□□ 2.02
Trim47-202ENSMUST00000106441 TchhA0A0B4J1F9 1599 aa27.65■■■□□ 2.02
Trim47-202ENSMUST00000106441 Neurod1Q60867 357 aa27.65■■■□□ 2.02
Trim47-202ENSMUST00000106441 Abca16E9PWJ7 1678 aa27.63■■■□□ 2.01
Trim47-202ENSMUST00000106441 Cux1P53564 1515 aa27.59■■■□□ 2.01
Trim47-202ENSMUST00000106441 PxdnQ3UQ28 1475 aa27.56■■■□□ 2
Trim47-202ENSMUST00000106441 Rpap1Q80TE0 1409 aa27.54■■■□□ 2
Trim47-202ENSMUST00000106441 Las1lA2BE28 776 aaKnown RBP27.52■■■□□ 2
Trim47-202ENSMUST00000106441 Ankrd26Q811D2 1581 aa27.52■■■□□ 2
Trim47-202ENSMUST00000106441 CadpsQ80TJ1 1355 aa27.52■■■□□ 2
Trim47-202ENSMUST00000106441 Fgd6Q69ZL1 1399 aa27.51■■□□□ 1.99
Trim47-202ENSMUST00000106441 Gm7298A0A0N4SVU1 1476 aa27.5■■□□□ 1.99
Trim47-202ENSMUST00000106441 Shroom2A2ALU4 1481 aa27.5■■□□□ 1.99
Trim47-202ENSMUST00000106441 Fyco1Q8VDC1 1437 aa27.5■■□□□ 1.99
Trim47-202ENSMUST00000106441 Abcc2Q8VI47 1543 aa27.5■■□□□ 1.99
Trim47-202ENSMUST00000106441 Abca5Q8K448 1642 aa27.47■■□□□ 1.99
Trim47-202ENSMUST00000106441 Arhgap27A2AB59 869 aa27.43■■□□□ 1.98
Trim47-202ENSMUST00000106441 Erich3F6QRE9 1637 aa27.42■■□□□ 1.98
Trim47-202ENSMUST00000106441 Soga1E1U8D0 1418 aa27.42■■□□□ 1.98
Trim47-202ENSMUST00000106441 Eea1Q8BL66 1411 aa27.42■■□□□ 1.98
Trim47-202ENSMUST00000106441 Dnmt1P13864 1620 aaKnown RBP27.41■■□□□ 1.98
Trim47-202ENSMUST00000106441 Map3k4O08648 1597 aa27.41■■□□□ 1.98
Trim47-202ENSMUST00000106441 Setd5Q5XJV7 1441 aa27.41■■□□□ 1.98
Trim47-202ENSMUST00000106441 AknaQ80VW7 1404 aa27.38■■□□□ 1.97
Trim47-202ENSMUST00000106441 Pabpn1Q8CCS6 302 aaKnown RBP27.35■■□□□ 1.97
Trim47-202ENSMUST00000106441 BC005561E9Q5E2 1589 aa27.34■■□□□ 1.97
Trim47-202ENSMUST00000106441 Pelp1Q9DBD5 1123 aaKnown RBP27.32■■□□□ 1.96
Trim47-202ENSMUST00000106441 Neo1P97798 1493 aa27.3■■□□□ 1.96
Trim47-202ENSMUST00000106441 Sall2Q9QX96 1004 aa27.29■■□□□ 1.96
Trim47-202ENSMUST00000106441 Lmo7E9PYF4 1699 aaKnown RBP27.29■■□□□ 1.96
Trim47-202ENSMUST00000106441 Slx4Q6P1D7 1565 aa27.28■■□□□ 1.96
Trim47-202ENSMUST00000106441 Arap1Q4LDD4 1452 aa27.27■■□□□ 1.96
Trim47-202ENSMUST00000106441 Pcf11G3X9Z4 1553 aa27.26■■□□□ 1.95
Trim47-202ENSMUST00000106441 Abcc1O35379 1528 aa27.25■■□□□ 1.95
Trim47-202ENSMUST00000106441 WrnO09053 1401 aa27.23■■□□□ 1.95
Trim47-202ENSMUST00000106441 Ap3b1Q9Z1T1 1105 aa27.22■■□□□ 1.95
Trim47-202ENSMUST00000106441 UbtfP25976 765 aaKnown RBP27.2■■□□□ 1.94
Trim47-202ENSMUST00000106441 Chd1P40201 1711 aa27.19■■□□□ 1.94
Trim47-202ENSMUST00000106441 Aebp1Q640N1 1128 aa27.18■■□□□ 1.94
Trim47-202ENSMUST00000106441 BlmO88700 1416 aa27.17■■□□□ 1.94
Trim47-202ENSMUST00000106441 Arhgef5E9Q7D5 1581 aa27.16■■□□□ 1.94
Trim47-202ENSMUST00000106441 Anks4bQ8K3X6 423 aa27.15■■□□□ 1.94
Trim47-202ENSMUST00000106441 Gm14025A2AP89 1413 aa27.14■■□□□ 1.93
Trim47-202ENSMUST00000106441 Arhgef12Q8R4H2 1543 aaKnown RBP27.12■■□□□ 1.93
Trim47-202ENSMUST00000106441 Zcchc11B2RX14 1644 aaKnown RBP27.1■■□□□ 1.93
Trim47-202ENSMUST00000106441 Gapvd1Q6PAR5 1458 aa27.07■■□□□ 1.92
Trim47-202ENSMUST00000106441 Jph4Q80WT0 628 aa27.07■■□□□ 1.92
Trim47-202ENSMUST00000106441 CntlnA2AM05 1397 aa27.05■■□□□ 1.92
Trim47-202ENSMUST00000106441 Rrbp1Q99PL5 1605 aaKnown RBP27.05■■□□□ 1.92
Trim47-202ENSMUST00000106441 Kif27Q7M6Z4 1394 aa27.05■■□□□ 1.92
Trim47-202ENSMUST00000106441 Tiam1Q60610 1591 aa27.02■■□□□ 1.92
Trim47-202ENSMUST00000106441 Cep170Q6A065 1588 aa27.01■■□□□ 1.91
Trim47-202ENSMUST00000106441 Ythdc2B2RR83 1445 aaKnown RBP27■■□□□ 1.91
Trim47-202ENSMUST00000106441 Rapgef6Q5NCJ1 1609 aa26.99■■□□□ 1.91
Trim47-202ENSMUST00000106441 Peg3Q3URU2 1571 aa26.99■■□□□ 1.91
Trim47-202ENSMUST00000106441 Arhgap31A6X8Z5 1425 aa26.98■■□□□ 1.91
Trim47-202ENSMUST00000106441 Naip1Q9QWK5 1403 aa26.97■■□□□ 1.91
Trim47-202ENSMUST00000106441 Col17a1Q07563 1470 aa26.97■■□□□ 1.91
Trim47-202ENSMUST00000106441 Ccdc141E9Q8Q6 1531 aa26.97■■□□□ 1.91
Trim47-202ENSMUST00000106441 Plekhg3Q4VAC9 1341 aa26.94■■□□□ 1.9
Trim47-202ENSMUST00000106441 ClspnQ80YR7 1315 aa26.93■■□□□ 1.9
Trim47-202ENSMUST00000106441 PtprtQ99M80 1454 aa26.92■■□□□ 1.9
Trim47-202ENSMUST00000106441 Ncoa2Q61026 1462 aa26.9■■□□□ 1.9
Trim47-202ENSMUST00000106441 Wdr66E9Q743 1299 aa26.89■■□□□ 1.9
Trim47-202ENSMUST00000106441 Fkbp15Q6P9Q6 1216 aaKnown RBP26.89■■□□□ 1.9
Trim47-202ENSMUST00000106441 1700123L14RikQ3V2K7 440 aa26.86■■□□□ 1.89
Trim47-202ENSMUST00000106441 Aebp2Q9Z248 504 aaKnown RBP26.86■■□□□ 1.89
Trim47-202ENSMUST00000106441 Gm1043A0A140LJC2 1431 aa26.86■■□□□ 1.89
Trim47-202ENSMUST00000106441 Mroh2aD3Z750 1679 aa26.85■■□□□ 1.89
Trim47-202ENSMUST00000106441 Lmod2Q3UHZ5 550 aa26.84■■□□□ 1.89
Trim47-202ENSMUST00000106441 Kdm5bQ80Y84 1544 aa26.84■■□□□ 1.89
Trim47-202ENSMUST00000106441 Arhgef11Q68FM7 1552 aa26.84■■□□□ 1.89
Trim47-202ENSMUST00000106441 Ncapd3Q6ZQK0 1506 aa26.83■■□□□ 1.89
Trim47-202ENSMUST00000106441 Adgrl3Q80TS3 1537 aa26.83■■□□□ 1.89
Trim47-202ENSMUST00000106441 TonslQ6NZL6 1363 aa26.8■■□□□ 1.88
Trim47-202ENSMUST00000106441 Gm156Q58A37 223 aa26.78■■□□□ 1.88
Trim47-202ENSMUST00000106441 AI481877A2ALV5 1481 aa26.77■■□□□ 1.88
Trim47-202ENSMUST00000106441 Magi1Q6RHR9 1471 aa26.77■■□□□ 1.88
Trim47-202ENSMUST00000106441 Mug1P28665 1476 aa26.76■■□□□ 1.87
Trim47-202ENSMUST00000106441 Cul7Q8VE73 1689 aa26.76■■□□□ 1.87
Trim47-202ENSMUST00000106441 Myt1Q8CFC2 1127 aa26.75■■□□□ 1.87
Trim47-202ENSMUST00000106441 Gcc2Q8CHG3 1679 aa26.75■■□□□ 1.87
Trim47-202ENSMUST00000106441 Ncoa3O09000 1398 aa26.74■■□□□ 1.87
Trim47-202ENSMUST00000106441 NhsB1AV60 1647 aa26.73■■□□□ 1.87
Trim47-202ENSMUST00000106441 Fancd2Q80V62 1450 aa26.71■■□□□ 1.87
Trim47-202ENSMUST00000106441 NexmifQ5DTT1 1515 aa26.69■■□□□ 1.86
Trim47-202ENSMUST00000106441 Csrnp3P59055 597 aa26.69■■□□□ 1.86
Trim47-202ENSMUST00000106441 Cdk11bP24788 784 aaKnown RBP26.68■■□□□ 1.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms