RNA–Protein interactions for RNA: ENSMUST00000103580.3

Trav8d-1-201, Transcript of T cell receptor alpha variable 8D-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav8d-1, Length 400 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1-201ENSMUST00000103580 Ccdc88bQ4QRL3 1481 aa11.74□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 TnnQ80Z71 1560 aa11.74□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 Chd1P40201 1711 aa11.73□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 Samd9lQ69Z37 1561 aa11.72□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 AqrQ8CFQ3 1481 aaKnown RBP11.72□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 Fbxo41Q6NS60 873 aa11.69□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 MlecQ6ZQI3 291 aaKnown RBP11.69□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 Ifnlr1Q8CGK5 535 aa11.69□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 Rad54l2Q99NG0 1466 aa11.67□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 Hecw2Q6I6G8 1578 aa11.67□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 AdgbG3UZ78 1657 aa11.66□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 Arhgef11Q68FM7 1552 aa11.66□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 Ercc6l2Q9JIM3 1537 aa11.65□□□□□ -0.54
Trav8d-1-201ENSMUST00000103580 Grin2aP35436 1464 aa11.64□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 Soga1E1U8D0 1418 aa11.64□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 CadpsQ80TJ1 1355 aa11.63□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 Magi3Q9EQJ9 1476 aa11.61□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 EprsQ8CGC7 1512 aaKnown RBP11.6□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 Dnajc5gQ8C632 165 aa11.6□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 Mapkbp1Q6NS57 1503 aa11.6□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 AI481877A2ALV5 1481 aa11.59□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 Ttc37F8VPK0 1563 aa11.58□□□□□ -0.55
Trav8d-1-201ENSMUST00000103580 Brwd3A2AHJ4 1799 aa11.58□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Grin2bQ01097 1482 aa11.57□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Neo1P97798 1493 aa11.57□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Clasp1Q80TV8 1535 aaKnown RBP11.55□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 BC005561E9Q5E2 1589 aa11.54□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Depdc5P61460 1591 aa11.54□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Dnmt1P13864 1620 aaKnown RBP11.53□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Fndc1E9Q043 1732 aa11.52□□□□□ -0.56
Trav8d-1-201ENSMUST00000103580 Gm14025A2AP89 1413 aa11.52□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Arid3cA6PWV5 409 aa11.51□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Arhgap27A2AB59 869 aa11.48□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Cngb1E1AZ71 1325 aa11.48□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Pla2r1Q62028 1487 aa11.48□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Ecm2Q5FW85 670 aa11.47□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Efcab5A0JP43 1406 aa11.46□□□□□ -0.57
Trav8d-1-201ENSMUST00000103580 Arhgef12Q8R4H2 1543 aaKnown RBP11.44□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Abcc2Q8VI47 1543 aa11.44□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Kdm6bQ5NCY0 1641 aa11.43□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Map3k4O08648 1597 aa11.43□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Zfyve16Q80U44 1528 aa11.42□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Fkbp15Q6P9Q6 1216 aaKnown RBP11.42□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Abca16E9PWJ7 1678 aa11.42□□□□□ -0.58
Trav8d-1-201ENSMUST00000103580 Gpatch8A2A6A1 1505 aa11.4□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 Fmn1Q05860 1466 aa11.38□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 PxdnQ3UQ28 1475 aa11.38□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 NrkQ9R0G8 1455 aa11.36□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 TchhA0A0B4J1F9 1599 aa11.36□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 WizO88286 1684 aaKnown RBP11.36□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 Znf608Q56A10 1511 aa11.35□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 Lrrc9Q8CDN9 1456 aa11.35□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 Eif4g1Q6NZJ6 1600 aaKnown RBP11.35□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 SynmQ70IV5 1561 aa11.34□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 GapdhsQ64467 440 aa11.34□□□□□ -0.59
Trav8d-1-201ENSMUST00000103580 Rnf17Q99MV7 1640 aa11.31□□□□□ -0.6
Trav8d-1-201ENSMUST00000103580 Slx4Q6P1D7 1565 aa11.31□□□□□ -0.6
Trav8d-1-201ENSMUST00000103580 Jph4Q80WT0 628 aa11.29□□□□□ -0.6
Trav8d-1-201ENSMUST00000103580 Zeb1Q64318 1117 aa11.28□□□□□ -0.6
Trav8d-1-201ENSMUST00000103580 Naip2Q9QUK4 1447 aa11.26□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 PtprmP28828 1452 aa11.26□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 Adamts12Q811B3 1600 aa11.24□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 Wdr7Q920I9 1489 aa11.24□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 AglF8VPN4 1532 aa11.22□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 MyclP10166 368 aa11.22□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 Igf1rQ60751 1373 aa11.22□□□□□ -0.61
Trav8d-1-201ENSMUST00000103580 Rpap1Q80TE0 1409 aa11.2□□□□□ -0.62
Trav8d-1-201ENSMUST00000103580 Shroom4Q1W617 1475 aa11.19□□□□□ -0.62
Trav8d-1-201ENSMUST00000103580 Kdm5bQ80Y84 1544 aa11.16□□□□□ -0.62
Trav8d-1-201ENSMUST00000103580 Qser1A2BIE1 1698 aa11.14□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Abca5Q8K448 1642 aa11.14□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Neurl4Q5NCX5 1563 aa11.14□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Ahdc1Q6PAL7 1594 aaKnown RBP11.12□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 SphkapQ6NSW3 1687 aa11.12□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Cul7Q8VE73 1689 aa11.12□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Rrbp1Q99PL5 1605 aaKnown RBP11.12□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Camsap2Q8C1B1 1461 aa11.12□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Atp10dQ8K2X1 1416 aa11.11□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Kif7B7ZNG0 1348 aa11.1□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 NhsB1AV60 1647 aa11.1□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 A2mQ6GQT1 1474 aa11.1□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Kif14L0N7N1 1674 aaKnown RBP11.1□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Gm7298A0A0N4SVU1 1476 aa11.09□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Scn4aQ9ER60 1841 aa11.09□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 WrnO09053 1401 aa11.09□□□□□ -0.63
Trav8d-1-201ENSMUST00000103580 Adamtsl3G3UXC7 1706 aa11.05□□□□□ -0.64
Trav8d-1-201ENSMUST00000103580 Safb2Q80YR5 991 aaKnown RBP11.05□□□□□ -0.64
Trav8d-1-201ENSMUST00000103580 Pip4k2bQ80XI4 416 aa11.04□□□□□ -0.64
Trav8d-1-201ENSMUST00000103580 Abca8bQ8K440 1620 aa11.02□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 HrcG5E8J6 738 aa11□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Supt6hQ62383 1726 aaKnown RBP11□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Arhgap31A6X8Z5 1425 aa10.99□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Synj2Q9D2G5 1434 aa10.99□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Atp10aO54827 1508 aa10.99□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Mroh2bQ7M6Y6 1581 aa10.99□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Ccdc141E9Q8Q6 1531 aa10.97□□□□□ -0.65
Trav8d-1-201ENSMUST00000103580 Dip2aQ8BWT5 1523 aa10.95□□□□□ -0.66
Trav8d-1-201ENSMUST00000103580 Gcc2Q8CHG3 1679 aa10.95□□□□□ -0.66
Trav8d-1-201ENSMUST00000103580 OvosQ3UU35 1456 aa10.94□□□□□ -0.66
Trav8d-1-201ENSMUST00000103580 Hspa1lP16627 641 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms