RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Carmil1Q6EDY6 1374 aa36.08■■■■□ 3.37
Scn1b-201ENSMUST00000098548 EprsQ8CGC7 1512 aaKnown RBP36.03■■■■□ 3.36
Scn1b-201ENSMUST00000098548 Shroom2A2ALU4 1481 aa36.03■■■■□ 3.36
Scn1b-201ENSMUST00000098548 WizO88286 1684 aaKnown RBP35.99■■■■□ 3.35
Scn1b-201ENSMUST00000098548 Clip1Q922J3 1391 aa35.97■■■■□ 3.35
Scn1b-201ENSMUST00000098548 Abca16E9PWJ7 1678 aa35.94■■■■□ 3.34
Scn1b-201ENSMUST00000098548 Adamts12Q811B3 1600 aa35.93■■■■□ 3.34
Scn1b-201ENSMUST00000098548 TchhA0A0B4J1F9 1599 aa35.91■■■■□ 3.34
Scn1b-201ENSMUST00000098548 PxdnQ3UQ28 1475 aa35.91■■■■□ 3.34
Scn1b-201ENSMUST00000098548 Fgd6Q69ZL1 1399 aa35.89■■■■□ 3.34
Scn1b-201ENSMUST00000098548 Pabpn1Q8CCS6 302 aaKnown RBP35.85■■■■□ 3.33
Scn1b-201ENSMUST00000098548 Abcc2Q8VI47 1543 aa35.84■■■■□ 3.33
Scn1b-201ENSMUST00000098548 Pelp1Q9DBD5 1123 aaKnown RBP35.82■■■■□ 3.32
Scn1b-201ENSMUST00000098548 Cux1P53564 1515 aa35.82■■■■□ 3.32
Scn1b-201ENSMUST00000098548 Polr1aO35134 1717 aaKnown RBP35.8■■■■□ 3.32
Scn1b-201ENSMUST00000098548 Arhgap27A2AB59 869 aa35.8■■■■□ 3.32
Scn1b-201ENSMUST00000098548 CadpsQ80TJ1 1355 aa35.78■■■■□ 3.32
Scn1b-201ENSMUST00000098548 Rpap1Q80TE0 1409 aa35.76■■■■□ 3.32
Scn1b-201ENSMUST00000098548 Gm7298A0A0N4SVU1 1476 aa35.76■■■■□ 3.31
Scn1b-201ENSMUST00000098548 AknaQ80VW7 1404 aa35.73■■■■□ 3.31
Scn1b-201ENSMUST00000098548 Dnmt1P13864 1620 aaKnown RBP35.71■■■■□ 3.31
Scn1b-201ENSMUST00000098548 Map3k4O08648 1597 aa35.67■■■■□ 3.3
Scn1b-201ENSMUST00000098548 Ankrd26Q811D2 1581 aa35.66■■■■□ 3.3
Scn1b-201ENSMUST00000098548 Abca5Q8K448 1642 aa35.64■■■■□ 3.3
Scn1b-201ENSMUST00000098548 BC005561E9Q5E2 1589 aa35.63■■■■□ 3.29
Scn1b-201ENSMUST00000098548 Soga1E1U8D0 1418 aa35.63■■■■□ 3.29
Scn1b-201ENSMUST00000098548 Fyco1Q8VDC1 1437 aa35.61■■■■□ 3.29
Scn1b-201ENSMUST00000098548 Neo1P97798 1493 aa35.58■■■■□ 3.29
Scn1b-201ENSMUST00000098548 Abcc1O35379 1528 aa35.57■■■■□ 3.28
Scn1b-201ENSMUST00000098548 Slx4Q6P1D7 1565 aa35.53■■■■□ 3.28
Scn1b-201ENSMUST00000098548 Setd5Q5XJV7 1441 aa35.48■■■■□ 3.27
Scn1b-201ENSMUST00000098548 Chd1P40201 1711 aa35.48■■■■□ 3.27
Scn1b-201ENSMUST00000098548 Col17a1Q07563 1470 aa35.46■■■■□ 3.27
Scn1b-201ENSMUST00000098548 Erich3F6QRE9 1637 aa35.44■■■■□ 3.26
Scn1b-201ENSMUST00000098548 WrnO09053 1401 aa35.43■■■■□ 3.26
Scn1b-201ENSMUST00000098548 Rpgrip1Q9EPQ2 1331 aa35.42■■■■□ 3.26
Scn1b-201ENSMUST00000098548 Eea1Q8BL66 1411 aa35.42■■■■□ 3.26
Scn1b-201ENSMUST00000098548 Gapvd1Q6PAR5 1458 aa35.39■■■■□ 3.26
Scn1b-201ENSMUST00000098548 Ap3b1Q9Z1T1 1105 aa35.38■■■■□ 3.25
Scn1b-201ENSMUST00000098548 Gm14025A2AP89 1413 aa35.35■■■■□ 3.25
Scn1b-201ENSMUST00000098548 Dnajc5P60904 198 aa35.34■■■■□ 3.25
Scn1b-201ENSMUST00000098548 Zcchc11B2RX14 1644 aaKnown RBP35.34■■■■□ 3.25
Scn1b-201ENSMUST00000098548 Lmo7E9PYF4 1699 aaKnown RBP35.32■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Cep170Q6A065 1588 aa35.32■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Jph4Q80WT0 628 aa35.31■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Aebp1Q640N1 1128 aa35.3■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Arhgef12Q8R4H2 1543 aaKnown RBP35.3■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Ythdc2B2RR83 1445 aaKnown RBP35.3■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Pcf11G3X9Z4 1553 aa35.29■■■■□ 3.24
Scn1b-201ENSMUST00000098548 Arap1Q4LDD4 1452 aa35.29■■■■□ 3.24
Scn1b-201ENSMUST00000098548 PtprtQ99M80 1454 aa35.23■■■■□ 3.23
Scn1b-201ENSMUST00000098548 BlmO88700 1416 aa35.2■■■■□ 3.23
Scn1b-201ENSMUST00000098548 Fkbp15Q6P9Q6 1216 aaKnown RBP35.15■■■■□ 3.22
Scn1b-201ENSMUST00000098548 Adgrl3Q80TS3 1537 aa35.14■■■■□ 3.22
Scn1b-201ENSMUST00000098548 Gm156Q58A37 223 aa35.13■■■■□ 3.21
Scn1b-201ENSMUST00000098548 Rrbp1Q99PL5 1605 aaKnown RBP35.11■■■■□ 3.21
Scn1b-201ENSMUST00000098548 Arhgef5E9Q7D5 1581 aa35.11■■■■□ 3.21
Scn1b-201ENSMUST00000098548 Arhgap31A6X8Z5 1425 aa35.09■■■■□ 3.21
Scn1b-201ENSMUST00000098548 Kif27Q7M6Z4 1394 aa35.09■■■■□ 3.21
Scn1b-201ENSMUST00000098548 Acin1Q9JIX8 1338 aaKnown RBP35.08■■■■□ 3.21
Scn1b-201ENSMUST00000098548 Ehmt2Q9Z148 1263 aaKnown RBP35.04■■■■□ 3.2
Scn1b-201ENSMUST00000098548 Rapgef6Q5NCJ1 1609 aa35.02■■■■□ 3.2
Scn1b-201ENSMUST00000098548 Ccdc141E9Q8Q6 1531 aa35.01■■■■□ 3.2
Scn1b-201ENSMUST00000098548 CntlnA2AM05 1397 aa35■■■■□ 3.19
Scn1b-201ENSMUST00000098548 Kdm5bQ80Y84 1544 aa34.92■■■■□ 3.18
Scn1b-201ENSMUST00000098548 Mroh2aD3Z750 1679 aa34.92■■■■□ 3.18
Scn1b-201ENSMUST00000098548 Naip1Q9QWK5 1403 aa34.91■■■■□ 3.18
Scn1b-201ENSMUST00000098548 AI481877A2ALV5 1481 aa34.91■■■■□ 3.18
Scn1b-201ENSMUST00000098548 Ifnlr1Q8CGK5 535 aa34.91■■■■□ 3.18
Scn1b-201ENSMUST00000098548 Tiam1Q60610 1591 aa34.9■■■■□ 3.18
Scn1b-201ENSMUST00000098548 Plekhg3Q4VAC9 1341 aa34.87■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Lmod2Q3UHZ5 550 aa34.87■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Ncoa2Q61026 1462 aa34.86■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Arhgef11Q68FM7 1552 aa34.84■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Cul7Q8VE73 1689 aa34.84■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Peg3Q3URU2 1571 aa34.84■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Gm1043A0A140LJC2 1431 aa34.83■■■■□ 3.17
Scn1b-201ENSMUST00000098548 Ncoa3O09000 1398 aa34.79■■■■□ 3.16
Scn1b-201ENSMUST00000098548 NhsB1AV60 1647 aa34.78■■■■□ 3.16
Scn1b-201ENSMUST00000098548 Pprc1Q6NZN1 1644 aa34.78■■■■□ 3.16
Scn1b-201ENSMUST00000098548 Gcc2Q8CHG3 1679 aa34.77■■■■□ 3.16
Scn1b-201ENSMUST00000098548 Setbp1Q9Z180 1582 aa34.77■■■■□ 3.16
Scn1b-201ENSMUST00000098548 Magi1Q6RHR9 1471 aa34.76■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Igf1rQ60751 1373 aa34.75■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Mug1P28665 1476 aa34.73■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Znf608Q56A10 1511 aa34.73■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Ttbk1Q6PCN3 1308 aa34.72■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Ak9G3UYQ4 1894 aa34.71■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Fancd2Q80V62 1450 aa34.7■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Lrrc9Q8CDN9 1456 aa34.7■■■■□ 3.15
Scn1b-201ENSMUST00000098548 Prex2Q3LAC4 1598 aa34.67■■■■□ 3.14
Scn1b-201ENSMUST00000098548 Arid3cA6PWV5 409 aa34.63■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Wdr7Q920I9 1489 aa34.63■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Cdc42bpaQ3UU96 1719 aa34.62■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Atp10dQ8K2X1 1416 aa34.61■■■■□ 3.13
Scn1b-201ENSMUST00000098548 NexmifQ5DTT1 1515 aa34.59■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Kiaa1551Q5DTW7 1521 aa34.59■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Fam163aQ8CAA5 168 aa34.58■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Kiaa1210E9Q0C6 1637 aa34.58■■■■□ 3.13
Scn1b-201ENSMUST00000098548 Dhx57Q6P5D3 1388 aaKnown RBP34.55■■■■□ 3.12
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms