RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Clstn2Q9ER65 966 aa21.57■■□□□ 1.04
Ret-202ENSMUST00000088790 Calr4Q3TQS0 420 aa21.57■■□□□ 1.04
Ret-202ENSMUST00000088790 Cep162Q6ZQ06 1403 aa21.55■■□□□ 1.04
Ret-202ENSMUST00000088790 Fmn1Q05860 1466 aa21.53■■□□□ 1.04
Ret-202ENSMUST00000088790 Pds5bQ4VA53 1446 aaKnown RBP21.49■■□□□ 1.03
Ret-202ENSMUST00000088790 CftrP26361 1476 aa21.49■■□□□ 1.03
Ret-202ENSMUST00000088790 Cecr2E9Q2Z1 1453 aa21.48■■□□□ 1.03
Ret-202ENSMUST00000088790 Rgl3Q3UYI5 709 aa21.47■■□□□ 1.03
Ret-202ENSMUST00000088790 ScribQ80U72 1612 aa21.43■■□□□ 1.02
Ret-202ENSMUST00000088790 Smarca2Q6DIC0 1577 aa21.42■■□□□ 1.02
Ret-202ENSMUST00000088790 Ppp4r2Q0VGB7 417 aa21.42■■□□□ 1.02
Ret-202ENSMUST00000088790 Polr3glQ8R0C0 218 aa21.42■■□□□ 1.02
Ret-202ENSMUST00000088790 Arhgap27A2AB59 869 aa21.39■■□□□ 1.02
Ret-202ENSMUST00000088790 Upf2A2AT37 1269 aaKnown RBP21.37■■□□□ 1.01
Ret-202ENSMUST00000088790 Rad21Q61550 635 aaKnown RBP21.37■■□□□ 1.01
Ret-202ENSMUST00000088790 Mia2Q91ZV0 1396 aa21.34■■□□□ 1.01
Ret-202ENSMUST00000088790 Gm13695A2AK44 830 aa21.34■■□□□ 1.01
Ret-202ENSMUST00000088790 Wdr43Q6ZQL4 677 aaKnown RBP21.33■■□□□ 1
Ret-202ENSMUST00000088790 DaxxO35613 739 aa21.31■■□□□ 1
Ret-202ENSMUST00000088790 Hspa5P20029 655 aaKnown RBP21.29■■□□□ 1
Ret-202ENSMUST00000088790 Grwd1Q810D6 446 aaKnown RBP21.28■■□□□ 1
Ret-202ENSMUST00000088790 1700123L14RikQ3V2K7 440 aa21.27■■□□□ 1
Ret-202ENSMUST00000088790 Mtus2Q3UHD3 1353 aa21.24■□□□□ 0.99
Ret-202ENSMUST00000088790 Synj1Q8CHC4 1574 aa21.24■□□□□ 0.99
Ret-202ENSMUST00000088790 Aebp1Q640N1 1128 aa21.23■□□□□ 0.99
Ret-202ENSMUST00000088790 Card11Q8CIS0 1159 aa21.2■□□□□ 0.98
Ret-202ENSMUST00000088790 Cwc22Q8C5N3 908 aaKnown RBP21.2■□□□□ 0.98
Ret-202ENSMUST00000088790 Kif27Q7M6Z4 1394 aa21.18■□□□□ 0.98
Ret-202ENSMUST00000088790 Ofd1Q80Z25 1017 aa21.17■□□□□ 0.98
Ret-202ENSMUST00000088790 Rapgef2Q8CHG7 1496 aa21.16■□□□□ 0.98
Ret-202ENSMUST00000088790 Rrp7aQ9D1C9 280 aaKnown RBP21.16■□□□□ 0.98
Ret-202ENSMUST00000088790 P3h3Q8CG70 732 aa21.14■□□□□ 0.97
Ret-202ENSMUST00000088790 Mroh3A0A1D5RM54 893 aa21.14■□□□□ 0.97
Ret-202ENSMUST00000088790 Kdm2aP59997 1161 aa21.14■□□□□ 0.97
Ret-202ENSMUST00000088790 Plppr3Q7TPB0 716 aa21.13■□□□□ 0.97
Ret-202ENSMUST00000088790 ArxO35085 564 aa21.12■□□□□ 0.97
Ret-202ENSMUST00000088790 Atad2bE9Q166 1460 aaKnown RBP21.11■□□□□ 0.97
Ret-202ENSMUST00000088790 Rangap1P46061 589 aaKnown RBP21.1■□□□□ 0.97
Ret-202ENSMUST00000088790 Cux2P70298 1426 aa21.1■□□□□ 0.97
Ret-202ENSMUST00000088790 Fyco1Q8VDC1 1437 aa21.09■□□□□ 0.97
Ret-202ENSMUST00000088790 CntlnA2AM05 1397 aa21.09■□□□□ 0.97
Ret-202ENSMUST00000088790 Pkd2O35245 966 aa21.07■□□□□ 0.96
Ret-202ENSMUST00000088790 Baz1bQ9Z277 1479 aa21.07■□□□□ 0.96
Ret-202ENSMUST00000088790 Smarca4Q3TKT4 1613 aaKnown RBP21.02■□□□□ 0.96
Ret-202ENSMUST00000088790 Cabp1Q9JLK7 227 aa21.02■□□□□ 0.95
Ret-202ENSMUST00000088790 Wwc2Q6NXJ0 1187 aa21■□□□□ 0.95
Ret-202ENSMUST00000088790 Srpk2O54781 681 aaKnown RBP20.99■□□□□ 0.95
Ret-202ENSMUST00000088790 4930567H17RikQ3V0K5 233 aa20.99■□□□□ 0.95
Ret-202ENSMUST00000088790 Phldb1Q6PDH0 1371 aaKnown RBP20.99■□□□□ 0.95
Ret-202ENSMUST00000088790 Sin3aQ60520 1274 aaKnown RBP20.99■□□□□ 0.95
Ret-202ENSMUST00000088790 Gm20521D3Z5F7 333 aa20.99■□□□□ 0.95
Ret-202ENSMUST00000088790 Carmil1Q6EDY6 1374 aa20.99■□□□□ 0.95
Ret-202ENSMUST00000088790 Map4P27546 1125 aaKnown RBP20.98■□□□□ 0.95
Ret-202ENSMUST00000088790 Arhgap35Q91YM2 1499 aa20.97■□□□□ 0.95
Ret-202ENSMUST00000088790 Fam71e1A1L3C1 212 aa20.97■□□□□ 0.95
Ret-202ENSMUST00000088790 Rpap1Q80TE0 1409 aa20.97■□□□□ 0.95
Ret-202ENSMUST00000088790 Mphosph9A6H5Y1 991 aa20.96■□□□□ 0.95
Ret-202ENSMUST00000088790 Cttnbp2B9EJA2 1648 aa20.93■□□□□ 0.94
Ret-202ENSMUST00000088790 IqubQ8CDK3 788 aa20.92■□□□□ 0.94
Ret-202ENSMUST00000088790 DiexfQ8BTT6 772 aaKnown RBP20.92■□□□□ 0.94
Ret-202ENSMUST00000088790 SafbD3YXK2 937 aaKnown RBP20.91■□□□□ 0.94
Ret-202ENSMUST00000088790 Trim26Q99PN3 545 aa20.91■□□□□ 0.94
Ret-202ENSMUST00000088790 Trak1Q6PD31 939 aa20.9■□□□□ 0.94
Ret-202ENSMUST00000088790 Rundc1Q0VDN7 615 aa20.9■□□□□ 0.94
Ret-202ENSMUST00000088790 LrpprcQ6PB66 1392 aaKnown RBP20.88■□□□□ 0.93
Ret-202ENSMUST00000088790 Stk24Q99KH8 431 aa20.87■□□□□ 0.93
Ret-202ENSMUST00000088790 Safb2Q80YR5 991 aaKnown RBP20.86■□□□□ 0.93
Ret-202ENSMUST00000088790 Exosc9Q9JHI7 438 aaKnown RBP20.83■□□□□ 0.92
Ret-202ENSMUST00000088790 Apbb1Q9QXJ1 710 aa20.82■□□□□ 0.92
Ret-202ENSMUST00000088790 Trim30dE9PWL0 497 aa20.81■□□□□ 0.92
Ret-202ENSMUST00000088790 Neurod2Q62414 383 aa20.81■□□□□ 0.92
Ret-202ENSMUST00000088790 Exoc6Q8R313 802 aa20.8■□□□□ 0.92
Ret-202ENSMUST00000088790 CanxP35564 591 aaKnown RBP20.8■□□□□ 0.92
Ret-202ENSMUST00000088790 Ccnb3Q810T2 1396 aa20.78■□□□□ 0.92
Ret-202ENSMUST00000088790 AknaQ80VW7 1404 aa20.78■□□□□ 0.92
Ret-202ENSMUST00000088790 Ifit1bl1D3Z6F0 470 aa20.74■□□□□ 0.91
Ret-202ENSMUST00000088790 Stag3O70576 1240 aa20.74■□□□□ 0.91
Ret-202ENSMUST00000088790 Iqgap2Q3UQ44 1575 aa20.74■□□□□ 0.91
Ret-202ENSMUST00000088790 Dhx29Q6PGC1 1365 aaKnown RBP20.73■□□□□ 0.91
Ret-202ENSMUST00000088790 Fgd1P52734 960 aa20.73■□□□□ 0.91
Ret-202ENSMUST00000088790 Hsp90ab1P11499 724 aaKnown RBP20.71■□□□□ 0.91
Ret-202ENSMUST00000088790 Arid3cA6PWV5 409 aa20.7■□□□□ 0.9
Ret-202ENSMUST00000088790 Dhx57Q6P5D3 1388 aaKnown RBP20.69■□□□□ 0.9
Ret-202ENSMUST00000088790 Cnga1P29974 684 aa20.68■□□□□ 0.9
Ret-202ENSMUST00000088790 Plekhh2Q8C115 1491 aa20.68■□□□□ 0.9
Ret-202ENSMUST00000088790 Mapk8ip3Q9ESN9 1337 aa20.68■□□□□ 0.9
Ret-202ENSMUST00000088790 UacaQ8CGB3 1411 aa20.67■□□□□ 0.9
Ret-202ENSMUST00000088790 Hsp90aa1P07901 733 aaKnown RBP20.67■□□□□ 0.9
Ret-202ENSMUST00000088790 Zscan21Q07231 555 aa20.67■□□□□ 0.9
Ret-202ENSMUST00000088790 Nup155Q99P88 1391 aaKnown RBP20.66■□□□□ 0.9
Ret-202ENSMUST00000088790 Fhad1A6PWD2 1420 aa20.65■□□□□ 0.9
Ret-202ENSMUST00000088790 Slc4a3P16283 1227 aa20.63■□□□□ 0.89
Ret-202ENSMUST00000088790 Lemd3Q9WU40 921 aa20.63■□□□□ 0.89
Ret-202ENSMUST00000088790 Gtf2e1Q9D0D5 440 aa20.61■□□□□ 0.89
Ret-202ENSMUST00000088790 Tmf1B9EKI3 1091 aa20.61■□□□□ 0.89
Ret-202ENSMUST00000088790 Rwdd1Q9CQK7 243 aa20.61■□□□□ 0.89
Ret-202ENSMUST00000088790 Ccdc9Q8VC31 543 aaKnown RBP20.6■□□□□ 0.89
Ret-202ENSMUST00000088790 Mak16Q8BGS0 296 aaKnown RBP20.59■□□□□ 0.89
Ret-202ENSMUST00000088790 Dbr1Q923B1 550 aa20.59■□□□□ 0.89
Ret-202ENSMUST00000088790 Sart1Q9Z315 806 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms