RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Ncapd3Q6ZQK0 1506 aa15.66■□□□□ 0.1
Ccdc87-201ENSMUST00000088653 Pcf11G3X9Z4 1553 aa15.65■□□□□ 0.1
Ccdc87-201ENSMUST00000088653 Cux1P53564 1515 aa15.64■□□□□ 0.09
Ccdc87-201ENSMUST00000088653 Polr1aO35134 1717 aaKnown RBP15.61■□□□□ 0.09
Ccdc87-201ENSMUST00000088653 Urb2E9Q7L1 1524 aaKnown RBP15.6■□□□□ 0.09
Ccdc87-201ENSMUST00000088653 Naip1Q9QWK5 1403 aa15.59■□□□□ 0.09
Ccdc87-201ENSMUST00000088653 Dnajc5bQ9CQ94 199 aa15.59■□□□□ 0.09
Ccdc87-201ENSMUST00000088653 Pcgf6Q99NA9 353 aa15.58■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Peg3Q3URU2 1571 aa15.58■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Slx4Q6P1D7 1565 aa15.58■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Rad54l2Q99NG0 1466 aa15.56■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Fyco1Q8VDC1 1437 aa15.56■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Ap3b1Q9Z1T1 1105 aa15.55■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Rpap1Q80TE0 1409 aa15.54■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 CntlnA2AM05 1397 aa15.52■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 Pla2r1Q62028 1487 aa15.52■□□□□ 0.08
Ccdc87-201ENSMUST00000088653 TchhA0A0B4J1F9 1599 aa15.52■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 Magi3Q9EQJ9 1476 aa15.51■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 Gpatch8A2A6A1 1505 aa15.5■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 Plb1Q3TTY0 1478 aa15.48■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 Kdm5bQ80Y84 1544 aa15.48■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 EprsQ8CGC7 1512 aaKnown RBP15.48■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 BlmO88700 1416 aa15.47■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 Abca5Q8K448 1642 aa15.47■□□□□ 0.07
Ccdc87-201ENSMUST00000088653 Supt5hO55201 1082 aaKnown RBP15.46■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Grin2aP35436 1464 aa15.45■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Disp1Q3TDN0 1521 aa15.45■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Setd1bQ8CFT2 1985 aa15.45■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Pbrm1Q8BSQ9 1634 aaKnown RBP15.45■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Adamts12Q811B3 1600 aa15.42■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Gm1043A0A140LJC2 1431 aa15.4■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Aebp1Q640N1 1128 aa15.4■□□□□ 0.06
Ccdc87-201ENSMUST00000088653 Ift140E9PY46 1464 aa15.39■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 WizO88286 1684 aaKnown RBP15.39■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 CadpsQ80TJ1 1355 aa15.39■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 Gm7298A0A0N4SVU1 1476 aa15.37■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 Lrriq1Q0P5X1 1673 aa15.37■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 Nup160Q9Z0W3 1402 aaKnown RBP15.36■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 Abca16E9PWJ7 1678 aa15.34■□□□□ 0.05
Ccdc87-201ENSMUST00000088653 3425401B19RikD3Z1D3 1412 aa15.33■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 Soga1E1U8D0 1418 aa15.33■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 Las1lA2BE28 776 aaKnown RBP15.32■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 Lmod2Q3UHZ5 550 aa15.3■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 Lmtk2Q3TYD6 1471 aa15.29■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 PxdnQ3UQ28 1475 aa15.29■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 TonslQ6NZL6 1363 aa15.29■□□□□ 0.04
Ccdc87-201ENSMUST00000088653 Gcc2Q8CHG3 1679 aa15.26■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Kif27Q7M6Z4 1394 aa15.24■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Cc2d2bA0A286YDU8 1405 aa15.23■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Fhad1A6PWD2 1420 aa15.23■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Sall2Q9QX96 1004 aa15.22■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Abcc2Q8VI47 1543 aa15.22■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Mia2Q91ZV0 1396 aa15.22■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 Naip2Q9QUK4 1447 aa15.21■□□□□ 0.03
Ccdc87-201ENSMUST00000088653 BC005561E9Q5E2 1589 aa15.2■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Vps8Q0P5W1 1427 aa15.2■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 A2mQ6GQT1 1474 aa15.19■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 NexmifQ5DTT1 1515 aa15.19■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Ccnb3Q810T2 1396 aa15.18■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Rapgef6Q5NCJ1 1609 aa15.18■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Rusc2Q80U22 1514 aa15.18■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Aebp2Q9Z248 504 aaKnown RBP15.17■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Shroom2A2ALU4 1481 aa15.15■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 WrnO09053 1401 aa15.15■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Eif4g3Q80XI3 1579 aaKnown RBP15.15■□□□□ 0.02
Ccdc87-201ENSMUST00000088653 Fam50aQ9WV03 339 aaKnown RBP15.14■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Ankrd36D3Z4K0 1415 aa15.12■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 ClspnQ80YR7 1315 aa15.12■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Arhgef11Q68FM7 1552 aa15.12■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Mug1P28665 1476 aa15.11■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Map3k4O08648 1597 aa15.11■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Ccer2J3QPU5 274 aa15.11■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Cdc42bpaQ3UU96 1719 aa15.11■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Wdr66E9Q743 1299 aa15.1■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Fhod3Q76LL6 1578 aa15.1■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Ncoa3O09000 1398 aa15.09■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Eid3Q3V124 375 aa15.09■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Dennd4bQ3U1Y4 1499 aa15.09■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 UacaQ8CGB3 1411 aa15.08■□□□□ 0.01
Ccdc87-201ENSMUST00000088653 Arhgap27A2AB59 869 aa15.08■□□□□ 0
Ccdc87-201ENSMUST00000088653 Dnmt1P13864 1620 aaKnown RBP15.07■□□□□ 0
Ccdc87-201ENSMUST00000088653 Kiaa1551Q5DTW7 1521 aa15.06■□□□□ 0
Ccdc87-201ENSMUST00000088653 Zcchc11B2RX14 1644 aaKnown RBP15.06■□□□□ 0
Ccdc87-201ENSMUST00000088653 Cul7Q8VE73 1689 aa15.05■□□□□ 0
Ccdc87-201ENSMUST00000088653 Rfx7F8VPJ6 1459 aa15.05■□□□□ -0
Ccdc87-201ENSMUST00000088653 Ncoa2Q61026 1462 aa15.03■□□□□ -0
Ccdc87-201ENSMUST00000088653 Mroh2aD3Z750 1679 aa15.01□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Arhgap31A6X8Z5 1425 aa15.01□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Ccdc141E9Q8Q6 1531 aa15□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Arhgef40Q3UPH7 1517 aa15□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Adcy10Q8C0T9 1614 aa15□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Kdm6bQ5NCY0 1641 aa14.99□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Rrbp1Q99PL5 1605 aaKnown RBP14.99□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Dhx57Q6P5D3 1388 aaKnown RBP14.98□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Abcc5Q9R1X5 1436 aa14.98□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Magi1Q6RHR9 1471 aa14.98□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Mapkbp1Q6NS57 1503 aa14.98□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Setbp1Q9Z180 1582 aa14.97□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Plekhh2Q8C115 1491 aa14.96□□□□□ -0.01
Ccdc87-201ENSMUST00000088653 Chic2Q9D9G3 165 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms