RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Gm38655A0A286YDK6 273 aa19.7■□□□□ 0.74
Rrp1b-201ENSMUST00000081339 Atp1b4Q99ME6 356 aa19.7■□□□□ 0.74
Rrp1b-201ENSMUST00000081339 Cux2P70298 1426 aa19.68■□□□□ 0.74
Rrp1b-201ENSMUST00000081339 Fmn1Q05860 1466 aa19.63■□□□□ 0.73
Rrp1b-201ENSMUST00000081339 Eea1Q8BL66 1411 aa19.61■□□□□ 0.73
Rrp1b-201ENSMUST00000081339 Synj1Q8CHC4 1574 aa19.61■□□□□ 0.73
Rrp1b-201ENSMUST00000081339 Smarca4Q3TKT4 1613 aaKnown RBP19.61■□□□□ 0.73
Rrp1b-201ENSMUST00000081339 Ccer2J3QPU5 274 aa19.6■□□□□ 0.73
Rrp1b-201ENSMUST00000081339 Gm13695A2AK44 830 aa19.57■□□□□ 0.72
Rrp1b-201ENSMUST00000081339 DiexfQ8BTT6 772 aaKnown RBP19.55■□□□□ 0.72
Rrp1b-201ENSMUST00000081339 Aebp2Q9Z248 504 aaKnown RBP19.5■□□□□ 0.71
Rrp1b-201ENSMUST00000081339 Prdm10Q3UTQ7 1184 aa19.5■□□□□ 0.71
Rrp1b-201ENSMUST00000081339 1700123L14RikQ3V2K7 440 aa19.47■□□□□ 0.71
Rrp1b-201ENSMUST00000081339 Calr4Q3TQS0 420 aa19.45■□□□□ 0.7
Rrp1b-201ENSMUST00000081339 Cep162Q6ZQ06 1403 aa19.43■□□□□ 0.7
Rrp1b-201ENSMUST00000081339 Iqgap2Q3UQ44 1575 aa19.43■□□□□ 0.7
Rrp1b-201ENSMUST00000081339 Safb2Q80YR5 991 aaKnown RBP19.42■□□□□ 0.7
Rrp1b-201ENSMUST00000081339 Hdac5Q9Z2V6 1113 aa19.42■□□□□ 0.7
Rrp1b-201ENSMUST00000081339 Clstn2Q9ER65 966 aa19.42■□□□□ 0.7
Rrp1b-201ENSMUST00000081339 AknaQ80VW7 1404 aa19.39■□□□□ 0.69
Rrp1b-201ENSMUST00000081339 LrpprcQ6PB66 1392 aaKnown RBP19.35■□□□□ 0.69
Rrp1b-201ENSMUST00000081339 Cttnbp2B9EJA2 1648 aa19.34■□□□□ 0.69
Rrp1b-201ENSMUST00000081339 Aebp1Q640N1 1128 aa19.34■□□□□ 0.69
Rrp1b-201ENSMUST00000081339 Baz1bQ9Z277 1479 aa19.34■□□□□ 0.69
Rrp1b-201ENSMUST00000081339 DaxxO35613 739 aa19.34■□□□□ 0.69
Rrp1b-201ENSMUST00000081339 Arid3cA6PWV5 409 aa19.33■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Rpap1Q80TE0 1409 aa19.32■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Kif27Q7M6Z4 1394 aa19.31■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Ppp4r2Q0VGB7 417 aa19.31■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Rrp7aQ9D1C9 280 aaKnown RBP19.3■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Dhx29Q6PGC1 1365 aaKnown RBP19.3■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Mrs2Q5NCE8 434 aa19.28■□□□□ 0.68
Rrp1b-201ENSMUST00000081339 Rgl3Q3UYI5 709 aa19.26■□□□□ 0.67
Rrp1b-201ENSMUST00000081339 4930567H17RikQ3V0K5 233 aa19.25■□□□□ 0.67
Rrp1b-201ENSMUST00000081339 Wdr43Q6ZQL4 677 aaKnown RBP19.25■□□□□ 0.67
Rrp1b-201ENSMUST00000081339 P3h3Q8CG70 732 aa19.24■□□□□ 0.67
Rrp1b-201ENSMUST00000081339 Ppp1r18Q8BQ30 594 aa19.23■□□□□ 0.67
Rrp1b-201ENSMUST00000081339 Mtus2Q3UHD3 1353 aa19.22■□□□□ 0.67
Rrp1b-201ENSMUST00000081339 Rapgef2Q8CHG7 1496 aa19.2■□□□□ 0.66
Rrp1b-201ENSMUST00000081339 Nlrp6Q91WS2 869 aa19.2■□□□□ 0.66
Rrp1b-201ENSMUST00000081339 BicraF8VPZ9 1578 aa19.17■□□□□ 0.66
Rrp1b-201ENSMUST00000081339 Upf2A2AT37 1269 aaKnown RBP19.15■□□□□ 0.66
Rrp1b-201ENSMUST00000081339 Carmil1Q6EDY6 1374 aa19.14■□□□□ 0.65
Rrp1b-201ENSMUST00000081339 Grwd1Q810D6 446 aaKnown RBP19.12■□□□□ 0.65
Rrp1b-201ENSMUST00000081339 Fam71e1A1L3C1 212 aa19.12■□□□□ 0.65
Rrp1b-201ENSMUST00000081339 Kdm2aP59997 1161 aa19.11■□□□□ 0.65
Rrp1b-201ENSMUST00000081339 Mroh3A0A1D5RM54 893 aa19.07■□□□□ 0.64
Rrp1b-201ENSMUST00000081339 MyclP10166 368 aa19.05■□□□□ 0.64
Rrp1b-201ENSMUST00000081339 Frmpd1A2AKB4 1549 aa19.04■□□□□ 0.64
Rrp1b-201ENSMUST00000081339 CntlnA2AM05 1397 aa19.03■□□□□ 0.64
Rrp1b-201ENSMUST00000081339 Cabp1Q9JLK7 227 aa19.03■□□□□ 0.64
Rrp1b-201ENSMUST00000081339 Stk24Q99KH8 431 aa19.02■□□□□ 0.64
Rrp1b-201ENSMUST00000081339 Mia2Q91ZV0 1396 aa18.99■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Pabpn1Q8CCS6 302 aaKnown RBP18.99■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Dnajc5bQ9CQ94 199 aa18.99■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Lemd3Q9WU40 921 aa18.99■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Polr3glQ8R0C0 218 aa18.99■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Rad21Q61550 635 aaKnown RBP18.97■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Map4P27546 1125 aaKnown RBP18.97■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Fyco1Q8VDC1 1437 aa18.96■□□□□ 0.63
Rrp1b-201ENSMUST00000081339 Srpk2O54781 681 aaKnown RBP18.94■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 WrnO09053 1401 aa18.94■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Hspa5P20029 655 aaKnown RBP18.94■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Ccdc9Q8VC31 543 aaKnown RBP18.93■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Urb2E9Q7L1 1524 aaKnown RBP18.93■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Efcab5A0JP43 1406 aa18.93■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Gm20521D3Z5F7 333 aa18.92■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 ArxO35085 564 aa18.91■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Rad54l2Q99NG0 1466 aa18.91■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 SafbD3YXK2 937 aaKnown RBP18.9■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Ofd1Q80Z25 1017 aa18.9■□□□□ 0.62
Rrp1b-201ENSMUST00000081339 Mrc2Q64449 1479 aa18.89■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Card11Q8CIS0 1159 aa18.88■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Pkd2O35245 966 aa18.88■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Trak1Q6PD31 939 aa18.87■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Jph4Q80WT0 628 aa18.87■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 IqubQ8CDK3 788 aa18.87■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Cc2d2aQ8CFW7 1633 aa18.86■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Duox2A2AQ99 1517 aa18.86■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Hsp90aa1P07901 733 aaKnown RBP18.85■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Soga1E1U8D0 1418 aa18.85■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Dhx57Q6P5D3 1388 aaKnown RBP18.85■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Sart1Q9Z315 806 aaKnown RBP18.84■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Ccnb3Q810T2 1396 aa18.83■□□□□ 0.61
Rrp1b-201ENSMUST00000081339 Shroom4Q1W617 1475 aa18.83■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Kif3bQ61771 747 aa18.81■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Rangap1P46061 589 aaKnown RBP18.81■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Cwc22Q8C5N3 908 aaKnown RBP18.79■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Mphosph9A6H5Y1 991 aa18.78■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Wdr62Q3U3T8 1523 aa18.78■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Arhgap35Q91YM2 1499 aa18.78■□□□□ 0.6
Rrp1b-201ENSMUST00000081339 Exosc9Q9JHI7 438 aaKnown RBP18.77■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 PogzQ8BZH4 1409 aaKnown RBP18.77■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 CanxP35564 591 aaKnown RBP18.76■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 Stag3O70576 1240 aa18.74■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 Top2aQ01320 1528 aaKnown RBP18.74■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 Ccdc27Q3V036 639 aa18.73■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 MlecQ6ZQI3 291 aaKnown RBP18.73■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 NgefQ8CHT1 710 aa18.73■□□□□ 0.59
Rrp1b-201ENSMUST00000081339 Grin2bQ01097 1482 aa18.71■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms