RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Gm13697A2AK42 830 aa14.05□□□□□ -0.16
Cpsf1-201ENSMUST00000071898 BlmO88700 1416 aa14.04□□□□□ -0.16
Cpsf1-201ENSMUST00000071898 Thoc2B1AZI6 1594 aaKnown RBP14.03□□□□□ -0.16
Cpsf1-201ENSMUST00000071898 Fam135aQ6NS59 1506 aa14.02□□□□□ -0.16
Cpsf1-201ENSMUST00000071898 Eea1Q8BL66 1411 aa14.02□□□□□ -0.16
Cpsf1-201ENSMUST00000071898 Tnnt3Q9QZ47 272 aa14.02□□□□□ -0.16
Cpsf1-201ENSMUST00000071898 Rpap1Q80TE0 1409 aa14.01□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Ppp1r18Q8BQ30 594 aa14□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Eid3Q3V124 375 aa13.99□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Efcab5A0JP43 1406 aa13.99□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Cep162Q6ZQ06 1403 aa13.99□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Duox2A2AQ99 1517 aa13.97□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Carmil1Q6EDY6 1374 aa13.96□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 PogzQ8BZH4 1409 aaKnown RBP13.96□□□□□ -0.17
Cpsf1-201ENSMUST00000071898 Arid3cA6PWV5 409 aa13.95□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 Plb1Q3TTY0 1478 aa13.93□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 Lamc3Q9R0B6 1581 aa13.92□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 NrdcQ8BHG1 1161 aa13.92□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 Os9Q8K2C7 672 aa13.92□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 Kif27Q7M6Z4 1394 aa13.92□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 Rad54l2Q99NG0 1466 aa13.9□□□□□ -0.18
Cpsf1-201ENSMUST00000071898 Aebp1Q640N1 1128 aa13.89□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Safb2Q80YR5 991 aaKnown RBP13.89□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Rapgef2Q8CHG7 1496 aa13.89□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Ift140E9PY46 1464 aa13.88□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Grin2bQ01097 1482 aa13.88□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Chic2Q9D9G3 165 aa13.87□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Shroom4Q1W617 1475 aa13.87□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Bcl11aQ9QYE3 773 aa13.86□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Camsap1A2AHC3 1581 aa13.85□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Erich6D3Z6S9 713 aa13.85□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Soga1E1U8D0 1418 aa13.85□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Anks4bQ8K3X6 423 aa13.84□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 NrkQ9R0G8 1455 aa13.83□□□□□ -0.19
Cpsf1-201ENSMUST00000071898 Mapk8ip2Q9ERE9 830 aa13.83□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Eif5bQ05D44 1216 aaKnown RBP13.83□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Crocc2F6XLV1 1638 aa13.82□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Top2bQ64511 1612 aa13.82□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Top2aQ01320 1528 aaKnown RBP13.82□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Fgd6Q69ZL1 1399 aa13.81□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Cc2d2bA0A286YDU8 1405 aa13.81□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Jph4Q80WT0 628 aa13.8□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Anp32bQ9EST5 272 aaKnown RBP13.79□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 WrnO09053 1401 aa13.78□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Aebp2Q9Z248 504 aaKnown RBP13.77□□□□□ -0.2
Cpsf1-201ENSMUST00000071898 Clstn2Q9ER65 966 aa13.76□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Fyco1Q8VDC1 1437 aa13.76□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Gm38655A0A286YDK6 273 aa13.75□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Gm13695A2AK44 830 aa13.75□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Ccer2J3QPU5 274 aa13.75□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Csrnp3P59055 597 aa13.74□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Atp1b4Q99ME6 356 aa13.74□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Rtl5Q5DTT4 599 aa13.73□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Hdac5Q9Z2V6 1113 aa13.73□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 CntlnA2AM05 1397 aa13.71□□□□□ -0.21
Cpsf1-201ENSMUST00000071898 Rrp7aQ9D1C9 280 aaKnown RBP13.7□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 Dhx57Q6P5D3 1388 aaKnown RBP13.7□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 PtprkP35822 1457 aa13.7□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 Lemd3Q9WU40 921 aa13.69□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 Mtus2Q3UHD3 1353 aa13.69□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 CadpsQ80TJ1 1355 aa13.68□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 MyclP10166 368 aa13.66□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 Polr1aO35134 1717 aaKnown RBP13.65□□□□□ -0.22
Cpsf1-201ENSMUST00000071898 Mroh2bQ7M6Y6 1581 aa13.64□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 4930567H17RikQ3V0K5 233 aa13.64□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Gm14025A2AP89 1413 aa13.63□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Kif21aQ9QXL2 1672 aa13.63□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Arhgap35Q91YM2 1499 aa13.62□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 NeflP08551 543 aa13.62□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Grin2aP35436 1464 aa13.62□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 EprsQ8CGC7 1512 aaKnown RBP13.62□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Gm7298A0A0N4SVU1 1476 aa13.61□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 1700123L14RikQ3V2K7 440 aa13.61□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Aplp2Q06335 707 aa13.59□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 SynmQ70IV5 1561 aa13.59□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 MlecQ6ZQI3 291 aaKnown RBP13.58□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Map3k1P53349 1493 aa13.58□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Ncoa2Q61026 1462 aa13.58□□□□□ -0.23
Cpsf1-201ENSMUST00000071898 Anp32aO35381 247 aa13.56□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 TnnQ80Z71 1560 aa13.56□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 4933416C03RikQ3V063 378 aa13.55□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 Arhgap31A6X8Z5 1425 aa13.54□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 Disp1Q3TDN0 1521 aa13.54□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 Zbtb4Q5F293 982 aa13.53□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 P3h3Q8CG70 732 aa13.53□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 TchhA0A0B4J1F9 1599 aa13.53□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 Neo1P97798 1493 aa13.53□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 Sart1Q9Z315 806 aaKnown RBP13.52□□□□□ -0.24
Cpsf1-201ENSMUST00000071898 AqrQ8CFQ3 1481 aaKnown RBP13.51□□□□□ -0.25
Cpsf1-201ENSMUST00000071898 Ccnb3Q810T2 1396 aa13.5□□□□□ -0.25
Cpsf1-201ENSMUST00000071898 Cabp1Q9JLK7 227 aa13.5□□□□□ -0.25
Cpsf1-201ENSMUST00000071898 Lrriq1Q0P5X1 1673 aa13.47□□□□□ -0.25
Cpsf1-201ENSMUST00000071898 Mia2Q91ZV0 1396 aa13.46□□□□□ -0.25
Cpsf1-201ENSMUST00000071898 Kif3bQ61771 747 aa13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Map4P27546 1125 aaKnown RBP13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Gm156Q58A37 223 aa13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Mrs2Q5NCE8 434 aa13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Calr4Q3TQS0 420 aa13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Tdrd9Q14BI7 1383 aa13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Ccdc141E9Q8Q6 1531 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms