RNA–Protein interactions for RNA: ENSMUST00000064129.13

Ttc39a-201, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ttc39a, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-201ENSMUST00000064129 Cux1P53564 1515 aa26.16■■□□□ 1.78
Ttc39a-201ENSMUST00000064129 Tiam1Q60610 1591 aa26.14■■□□□ 1.78
Ttc39a-201ENSMUST00000064129 Pcf11G3X9Z4 1553 aa26.13■■□□□ 1.77
Ttc39a-201ENSMUST00000064129 Rad54l2Q99NG0 1466 aa26.11■■□□□ 1.77
Ttc39a-201ENSMUST00000064129 Lmo7E9PYF4 1699 aaKnown RBP26.09■■□□□ 1.77
Ttc39a-201ENSMUST00000064129 Ncapd3Q6ZQK0 1506 aa26.09■■□□□ 1.77
Ttc39a-201ENSMUST00000064129 Naip1Q9QWK5 1403 aa26.06■■□□□ 1.76
Ttc39a-201ENSMUST00000064129 Urb2E9Q7L1 1524 aaKnown RBP26.03■■□□□ 1.76
Ttc39a-201ENSMUST00000064129 Slx4Q6P1D7 1565 aa26.01■■□□□ 1.75
Ttc39a-201ENSMUST00000064129 Pcgf6Q99NA9 353 aa26■■□□□ 1.75
Ttc39a-201ENSMUST00000064129 Fyco1Q8VDC1 1437 aa26■■□□□ 1.75
Ttc39a-201ENSMUST00000064129 Polr1aO35134 1717 aaKnown RBP25.99■■□□□ 1.75
Ttc39a-201ENSMUST00000064129 Plb1Q3TTY0 1478 aa25.97■■□□□ 1.75
Ttc39a-201ENSMUST00000064129 Pla2r1Q62028 1487 aa25.96■■□□□ 1.75
Ttc39a-201ENSMUST00000064129 Magi3Q9EQJ9 1476 aa25.94■■□□□ 1.74
Ttc39a-201ENSMUST00000064129 BlmO88700 1416 aa25.93■■□□□ 1.74
Ttc39a-201ENSMUST00000064129 CntlnA2AM05 1397 aa25.92■■□□□ 1.74
Ttc39a-201ENSMUST00000064129 Rpap1Q80TE0 1409 aa25.9■■□□□ 1.74
Ttc39a-201ENSMUST00000064129 EprsQ8CGC7 1512 aaKnown RBP25.89■■□□□ 1.73
Ttc39a-201ENSMUST00000064129 Peg3Q3URU2 1571 aa25.88■■□□□ 1.73
Ttc39a-201ENSMUST00000064129 Grin2aP35436 1464 aa25.87■■□□□ 1.73
Ttc39a-201ENSMUST00000064129 Disp1Q3TDN0 1521 aa25.86■■□□□ 1.73
Ttc39a-201ENSMUST00000064129 Supt5hO55201 1082 aaKnown RBP25.85■■□□□ 1.73
Ttc39a-201ENSMUST00000064129 Aebp1Q640N1 1128 aa25.81■■□□□ 1.72
Ttc39a-201ENSMUST00000064129 CadpsQ80TJ1 1355 aa25.77■■□□□ 1.72
Ttc39a-201ENSMUST00000064129 Abca5Q8K448 1642 aa25.77■■□□□ 1.72
Ttc39a-201ENSMUST00000064129 TchhA0A0B4J1F9 1599 aa25.76■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Lmod2Q3UHZ5 550 aa25.76■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Kdm5bQ80Y84 1544 aa25.75■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Ift140E9PY46 1464 aa25.74■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Adamts12Q811B3 1600 aa25.72■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Gm7298A0A0N4SVU1 1476 aa25.72■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Gm1043A0A140LJC2 1431 aa25.72■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Setd1bQ8CFT2 1985 aa25.72■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Gpatch8A2A6A1 1505 aa25.71■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 WizO88286 1684 aaKnown RBP25.71■■□□□ 1.71
Ttc39a-201ENSMUST00000064129 Lrriq1Q0P5X1 1673 aa25.7■■□□□ 1.7
Ttc39a-201ENSMUST00000064129 Pbrm1Q8BSQ9 1634 aaKnown RBP25.68■■□□□ 1.7
Ttc39a-201ENSMUST00000064129 Nup160Q9Z0W3 1402 aaKnown RBP25.67■■□□□ 1.7
Ttc39a-201ENSMUST00000064129 3425401B19RikD3Z1D3 1412 aa25.63■■□□□ 1.69
Ttc39a-201ENSMUST00000064129 Las1lA2BE28 776 aaKnown RBP25.62■■□□□ 1.69
Ttc39a-201ENSMUST00000064129 PxdnQ3UQ28 1475 aa25.62■■□□□ 1.69
Ttc39a-201ENSMUST00000064129 Soga1E1U8D0 1418 aa25.61■■□□□ 1.69
Ttc39a-201ENSMUST00000064129 Abca16E9PWJ7 1678 aa25.59■■□□□ 1.69
Ttc39a-201ENSMUST00000064129 TonslQ6NZL6 1363 aa25.56■■□□□ 1.68
Ttc39a-201ENSMUST00000064129 Kif27Q7M6Z4 1394 aa25.54■■□□□ 1.68
Ttc39a-201ENSMUST00000064129 Cc2d2bA0A286YDU8 1405 aa25.49■■□□□ 1.67
Ttc39a-201ENSMUST00000064129 Fam50aQ9WV03 339 aaKnown RBP25.49■■□□□ 1.67
Ttc39a-201ENSMUST00000064129 Lmtk2Q3TYD6 1471 aa25.48■■□□□ 1.67
Ttc39a-201ENSMUST00000064129 Sall2Q9QX96 1004 aa25.46■■□□□ 1.67
Ttc39a-201ENSMUST00000064129 Ccnb3Q810T2 1396 aa25.43■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 Abcc2Q8VI47 1543 aa25.43■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 WrnO09053 1401 aa25.42■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 Aebp2Q9Z248 504 aaKnown RBP25.41■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 BC005561E9Q5E2 1589 aa25.41■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 Fhad1A6PWD2 1420 aa25.4■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 Eid3Q3V124 375 aa25.4■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 NexmifQ5DTT1 1515 aa25.4■■□□□ 1.66
Ttc39a-201ENSMUST00000064129 Naip2Q9QUK4 1447 aa25.39■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Mia2Q91ZV0 1396 aa25.38■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 A2mQ6GQT1 1474 aa25.38■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Rusc2Q80U22 1514 aa25.37■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Gcc2Q8CHG3 1679 aa25.36■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Arhgap27A2AB59 869 aa25.36■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Shroom2A2ALU4 1481 aa25.35■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Wdr66E9Q743 1299 aa25.34■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Vps8Q0P5W1 1427 aa25.34■■□□□ 1.65
Ttc39a-201ENSMUST00000064129 Rapgef6Q5NCJ1 1609 aa25.32■■□□□ 1.64
Ttc39a-201ENSMUST00000064129 Eif4g3Q80XI3 1579 aaKnown RBP25.29■■□□□ 1.64
Ttc39a-201ENSMUST00000064129 Mug1P28665 1476 aa25.27■■□□□ 1.64
Ttc39a-201ENSMUST00000064129 Ncoa3O09000 1398 aa25.26■■□□□ 1.63
Ttc39a-201ENSMUST00000064129 ClspnQ80YR7 1315 aa25.23■■□□□ 1.63
Ttc39a-201ENSMUST00000064129 Map3k4O08648 1597 aa25.21■■□□□ 1.63
Ttc39a-201ENSMUST00000064129 Arhgef11Q68FM7 1552 aa25.21■■□□□ 1.63
Ttc39a-201ENSMUST00000064129 Ccer2J3QPU5 274 aa25.19■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 Ankrd36D3Z4K0 1415 aa25.18■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 UacaQ8CGB3 1411 aa25.17■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 Dennd4bQ3U1Y4 1499 aa25.17■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 Arhgap31A6X8Z5 1425 aa25.16■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 Chic2Q9D9G3 165 aa25.16■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 Dnmt1P13864 1620 aaKnown RBP25.15■■□□□ 1.62
Ttc39a-201ENSMUST00000064129 Cdc42bpaQ3UU96 1719 aa25.14■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Kiaa1551Q5DTW7 1521 aa25.12■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Zcchc11B2RX14 1644 aaKnown RBP25.11■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Ncoa2Q61026 1462 aa25.1■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Ccdc141E9Q8Q6 1531 aa25.09■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Arhgef40Q3UPH7 1517 aa25.09■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Neo1P97798 1493 aa25.08■■□□□ 1.61
Ttc39a-201ENSMUST00000064129 Mroh2aD3Z750 1679 aa25.07■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Abcc5Q9R1X5 1436 aa25.05■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Rfx7F8VPJ6 1459 aa25.05■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Magi1Q6RHR9 1471 aa25.05■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Adcy10Q8C0T9 1614 aa25.04■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Plekhh2Q8C115 1491 aa25.04■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Fhod3Q76LL6 1578 aa25.03■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Kdm6bQ5NCY0 1641 aa25.02■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Dhx57Q6P5D3 1388 aaKnown RBP25.02■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Ppargc1bQ8VHJ7 1014 aa25.02■■□□□ 1.6
Ttc39a-201ENSMUST00000064129 Arhgef12Q8R4H2 1543 aaKnown RBP25.01■■□□□ 1.59
Ttc39a-201ENSMUST00000064129 Fgd6Q69ZL1 1399 aa24.99■■□□□ 1.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms