RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Arhgap35Q91YM2 1499 aa13.66□□□□□ -0.22
Pcdh1-201ENSMUST00000057185 Baz1bQ9Z277 1479 aa13.65□□□□□ -0.22
Pcdh1-201ENSMUST00000057185 Myt1Q8CFC2 1127 aa13.64□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Pelp1Q9DBD5 1123 aaKnown RBP13.64□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Cux2P70298 1426 aa13.63□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Fam71e1A1L3C1 212 aa13.63□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 NrdcQ8BHG1 1161 aa13.61□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Arap1Q4LDD4 1452 aa13.59□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Wdr62Q3U3T8 1523 aa13.59□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Hspa5P20029 655 aaKnown RBP13.58□□□□□ -0.23
Pcdh1-201ENSMUST00000057185 Shroom4Q1W617 1475 aa13.57□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Ttbk1Q6PCN3 1308 aa13.57□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Anp32aO35381 247 aa13.56□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Thoc2B1AZI6 1594 aaKnown RBP13.56□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Calr4Q3TQS0 420 aa13.54□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Zbtb7cQ8VCZ7 619 aa13.53□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Ncapd3Q6ZQK0 1506 aa13.53□□□□□ -0.24
Pcdh1-201ENSMUST00000057185 Aebp1Q640N1 1128 aa13.51□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Zbtb4Q5F293 982 aa13.51□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Sin3aQ60520 1274 aaKnown RBP13.5□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 LrpprcQ6PB66 1392 aaKnown RBP13.49□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 NrkQ9R0G8 1455 aa13.49□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Camsap1A2AHC3 1581 aa13.47□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Grin2bQ01097 1482 aa13.47□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Mrs2Q5NCE8 434 aa13.47□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 P3h3Q8CG70 732 aa13.47□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Fkbp15Q6P9Q6 1216 aaKnown RBP13.46□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Lamc3Q9R0B6 1581 aa13.46□□□□□ -0.25
Pcdh1-201ENSMUST00000057185 Ccer2J3QPU5 274 aa13.46□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Carmil1Q6EDY6 1374 aa13.46□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Ppp4r2Q0VGB7 417 aa13.45□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Arhgef5E9Q7D5 1581 aa13.45□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Naip1Q9QWK5 1403 aa13.45□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Mrc2Q64449 1479 aa13.44□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Mroh2bQ7M6Y6 1581 aa13.43□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 CntlnA2AM05 1397 aa13.43□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 TnnQ80Z71 1560 aa13.42□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 AqrQ8CFQ3 1481 aaKnown RBP13.41□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Dhx29Q6PGC1 1365 aaKnown RBP13.4□□□□□ -0.26
Pcdh1-201ENSMUST00000057185 Map3k1P53349 1493 aa13.39□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Fyco1Q8VDC1 1437 aa13.39□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Fam135aQ6NS59 1506 aa13.38□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Rad54l2Q99NG0 1466 aa13.37□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Duox2A2AQ99 1517 aa13.37□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Efcab5A0JP43 1406 aa13.37□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Tiam1Q60610 1591 aa13.36□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Mia2Q91ZV0 1396 aa13.35□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Gm13697A2AK42 830 aa13.35□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Arhgap27A2AB59 869 aa13.35□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Kif27Q7M6Z4 1394 aa13.35□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Rpap1Q80TE0 1409 aa13.35□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 DiexfQ8BTT6 772 aaKnown RBP13.33□□□□□ -0.27
Pcdh1-201ENSMUST00000057185 Wwc2Q6NXJ0 1187 aa13.33□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Eif4g1Q6NZJ6 1600 aaKnown RBP13.33□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Wdr43Q6ZQL4 677 aaKnown RBP13.33□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 PogzQ8BZH4 1409 aaKnown RBP13.31□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Ccnb3Q810T2 1396 aa13.31□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Pcf11G3X9Z4 1553 aa13.31□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Cux1P53564 1515 aa13.3□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Rgl3Q3UYI5 709 aa13.3□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Cabp1Q9JLK7 227 aa13.29□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Ifnlr1Q8CGK5 535 aa13.29□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Ankrd26Q811D2 1581 aa13.28□□□□□ -0.28
Pcdh1-201ENSMUST00000057185 Slx4Q6P1D7 1565 aa13.27□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Nolc1E9Q5C9 702 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Znf710Q3U288 666 aa13.26□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Anp32bQ9EST5 272 aaKnown RBP13.25□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 NeflP08551 543 aa13.24□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Slc4a3P16283 1227 aa13.24□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Mphosph9A6H5Y1 991 aa13.23□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Rtl5Q5DTT4 599 aa13.23□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Grwd1Q810D6 446 aaKnown RBP13.23□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Pkd2O35245 966 aa13.21□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Rad21Q61550 635 aaKnown RBP13.21□□□□□ -0.29
Pcdh1-201ENSMUST00000057185 Fhad1A6PWD2 1420 aa13.2□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Exoc6Q8R313 802 aa13.2□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 3425401B19RikD3Z1D3 1412 aa13.2□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Os9Q8K2C7 672 aa13.2□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Prdm10Q3UTQ7 1184 aa13.19□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Amer1Q7TS75 1132 aa13.19□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Mtus2Q3UHD3 1353 aa13.18□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Ofd1Q80Z25 1017 aa13.18□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Urb2E9Q7L1 1524 aaKnown RBP13.18□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Zfp644E9QA22 1323 aa13.18□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Unc13aQ4KUS2 1712 aa13.17□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 WrnO09053 1401 aa13.17□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Supt16hQ920B9 1047 aa13.17□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 4933416C03RikQ3V063 378 aa13.16□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 SynmQ70IV5 1561 aa13.16□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Gm7298A0A0N4SVU1 1476 aa13.15□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Smg6P61406 1418 aaKnown RBP13.15□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 Vps8Q0P5W1 1427 aa13.15□□□□□ -0.3
Pcdh1-201ENSMUST00000057185 EprsQ8CGC7 1512 aaKnown RBP13.14□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Erich6D3Z6S9 713 aa13.14□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 CadpsQ80TJ1 1355 aa13.13□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Polr1aO35134 1717 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Bcl11aQ9QYE3 773 aa13.12□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Plb1Q3TTY0 1478 aa13.12□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Samd9lQ69Z37 1561 aa13.11□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 TchhA0A0B4J1F9 1599 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 112.1 ms