RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Polr1aO35134 1717 aaKnown RBP42,53■■■■■ 4,4
Shf-201ENSMUST00000048635 Clip1Q922J3 1391 aa42,5■■■■■ 4,39
Shf-201ENSMUST00000048635 EprsQ8CGC7 1512 aaKnown RBP42,44■■■■■ 4,39
Shf-201ENSMUST00000048635 Adamts12Q811B3 1600 aa42,42■■■■■ 4,38
Shf-201ENSMUST00000048635 TchhA0A0B4J1F9 1599 aa42,37■■■■■ 4,37
Shf-201ENSMUST00000048635 Shroom2A2ALU4 1481 aa42,36■■■■■ 4,37
Shf-201ENSMUST00000048635 Myt1lP97500 1187 aa42,36■■■■■ 4,37
Shf-201ENSMUST00000048635 Rpap1Q80TE0 1409 aa42,33■■■■■ 4,37
Shf-201ENSMUST00000048635 WizO88286 1684 aaKnown RBP42,31■■■■■ 4,36
Shf-201ENSMUST00000048635 Abca16E9PWJ7 1678 aa42,29■■■■■ 4,36
Shf-201ENSMUST00000048635 Fgd6Q69ZL1 1399 aa42,24■■■■■ 4,35
Shf-201ENSMUST00000048635 Fyco1Q8VDC1 1437 aa42,14■■■■■ 4,34
Shf-201ENSMUST00000048635 Cux1P53564 1515 aa42,12■■■■■ 4,33
Shf-201ENSMUST00000048635 CadpsQ80TJ1 1355 aa42,12■■■■■ 4,33
Shf-201ENSMUST00000048635 Gm7298A0A0N4SVU1 1476 aa42,1■■■■■ 4,33
Shf-201ENSMUST00000048635 PxdnQ3UQ28 1475 aa42,1■■■■■ 4,33
Shf-201ENSMUST00000048635 Abca5Q8K448 1642 aa42,08■■■■■ 4,33
Shf-201ENSMUST00000048635 Abcc2Q8VI47 1543 aa42,07■■■■■ 4,33
Shf-201ENSMUST00000048635 Dnmt1P13864 1620 aaKnown RBP42,04■■■■■ 4,32
Shf-201ENSMUST00000048635 Soga1E1U8D0 1418 aa42,04■■■■■ 4,32
Shf-201ENSMUST00000048635 Map3k4O08648 1597 aa42,03■■■■■ 4,32
Shf-201ENSMUST00000048635 Ankrd26Q811D2 1581 aa42,03■■■■■ 4,32
Shf-201ENSMUST00000048635 Pabpn1Q8CCS6 302 aaKnown RBP42,02■■■■■ 4,32
Shf-201ENSMUST00000048635 Erich3F6QRE9 1637 aa41,99■■■■■ 4,31
Shf-201ENSMUST00000048635 Eea1Q8BL66 1411 aa41,95■■■■■ 4,31
Shf-201ENSMUST00000048635 Arhgap27A2AB59 869 aa41,95■■■■■ 4,31
Shf-201ENSMUST00000048635 AknaQ80VW7 1404 aa41,89■■■■■ 4,3
Shf-201ENSMUST00000048635 Setd5Q5XJV7 1441 aa41,88■■■■■ 4,29
Shf-201ENSMUST00000048635 BC005561E9Q5E2 1589 aa41,81■■■■■ 4,28
Shf-201ENSMUST00000048635 Slx4Q6P1D7 1565 aa41,81■■■■■ 4,28
Shf-201ENSMUST00000048635 Abcc1O35379 1528 aa41,79■■■■■ 4,28
Shf-201ENSMUST00000048635 Pelp1Q9DBD5 1123 aaKnown RBP41,78■■■■■ 4,28
Shf-201ENSMUST00000048635 Lmo7E9PYF4 1699 aaKnown RBP41,75■■■■■ 4,27
Shf-201ENSMUST00000048635 Neo1P97798 1493 aa41,75■■■■■ 4,27
Shf-201ENSMUST00000048635 Chd1P40201 1711 aa41,74■■■■■ 4,27
Shf-201ENSMUST00000048635 WrnO09053 1401 aa41,65■■■■■ 4,26
Shf-201ENSMUST00000048635 Gm14025A2AP89 1413 aa41,62■■■■■ 4,25
Shf-201ENSMUST00000048635 Pcf11G3X9Z4 1553 aa41,6■■■■■ 4,25
Shf-201ENSMUST00000048635 Arap1Q4LDD4 1452 aa41,58■■■■■ 4,25
Shf-201ENSMUST00000048635 Aebp1Q640N1 1128 aa41,57■■■■■ 4,25
Shf-201ENSMUST00000048635 Zcchc11B2RX14 1644 aaKnown RBP41,57■■■■■ 4,24
Shf-201ENSMUST00000048635 Rrbp1Q99PL5 1605 aaKnown RBP41,56■■■■■ 4,24
Shf-201ENSMUST00000048635 Arhgef12Q8R4H2 1543 aaKnown RBP41,55■■■■■ 4,24
Shf-201ENSMUST00000048635 BlmO88700 1416 aa41,52■■■■■ 4,24
Shf-201ENSMUST00000048635 Gapvd1Q6PAR5 1458 aa41,52■■■■■ 4,24
Shf-201ENSMUST00000048635 Arhgef5E9Q7D5 1581 aa41,51■■■■■ 4,24
Shf-201ENSMUST00000048635 Jph4Q80WT0 628 aa41,5■■■■■ 4,23
Shf-201ENSMUST00000048635 Col17a1Q07563 1470 aa41,46■■■■■ 4,23
Shf-201ENSMUST00000048635 CntlnA2AM05 1397 aa41,44■■■■■ 4,22
Shf-201ENSMUST00000048635 Cep170Q6A065 1588 aa41,43■■■■■ 4,22
Shf-201ENSMUST00000048635 Ythdc2B2RR83 1445 aaKnown RBP41,39■■■■■ 4,22
Shf-201ENSMUST00000048635 Kif27Q7M6Z4 1394 aa41,38■■■■■ 4,21
Shf-201ENSMUST00000048635 Peg3Q3URU2 1571 aa41,37■■■■■ 4,21
Shf-201ENSMUST00000048635 Rapgef6Q5NCJ1 1609 aa41,35■■■■■ 4,21
Shf-201ENSMUST00000048635 Ap3b1Q9Z1T1 1105 aa41,34■■■■■ 4,21
Shf-201ENSMUST00000048635 Tiam1Q60610 1591 aa41,31■■■■■ 4,2
Shf-201ENSMUST00000048635 Ccdc141E9Q8Q6 1531 aa41,29■■■■■ 4,2
Shf-201ENSMUST00000048635 Arhgap31A6X8Z5 1425 aa41,29■■■■■ 4,2
Shf-201ENSMUST00000048635 Ncoa2Q61026 1462 aa41,26■■■■■ 4,2
Shf-201ENSMUST00000048635 PtprtQ99M80 1454 aa41,21■■■■■ 4,19
Shf-201ENSMUST00000048635 Naip1Q9QWK5 1403 aa41,2■■■■■ 4,19
Shf-201ENSMUST00000048635 Kdm5bQ80Y84 1544 aa41,2■■■■■ 4,19
Shf-201ENSMUST00000048635 Adgrl3Q80TS3 1537 aa41,18■■■■■ 4,18
Shf-201ENSMUST00000048635 Dnajc5P60904 198 aa41,11■■■■■ 4,17
Shf-201ENSMUST00000048635 AI481877A2ALV5 1481 aa41,1■■■■■ 4,17
Shf-201ENSMUST00000048635 Gm156Q58A37 223 aa41,1■■■■■ 4,17
Shf-201ENSMUST00000048635 Igf1rQ60751 1373 aa41,07■■■■■ 4,16
Shf-201ENSMUST00000048635 Arhgef11Q68FM7 1552 aa41,07■■■■■ 4,16
Shf-201ENSMUST00000048635 Mroh2aD3Z750 1679 aa41,05■■■■■ 4,16
Shf-201ENSMUST00000048635 Gm1043A0A140LJC2 1431 aa41,03■■■■■ 4,16
Shf-201ENSMUST00000048635 Gcc2Q8CHG3 1679 aa41,02■■■■■ 4,16
Shf-201ENSMUST00000048635 Cul7Q8VE73 1689 aa41■■■■■ 4,15
Shf-201ENSMUST00000048635 NhsB1AV60 1647 aa41■■■■■ 4,15
Shf-201ENSMUST00000048635 Magi1Q6RHR9 1471 aa40,99■■■■■ 4,15
Shf-201ENSMUST00000048635 Kiaa1210E9Q0C6 1637 aa40,98■■■■■ 4,15
Shf-201ENSMUST00000048635 Dhx57Q6P5D3 1388 aaKnown RBP40,98■■■■■ 4,15
Shf-201ENSMUST00000048635 Fkbp15Q6P9Q6 1216 aaKnown RBP40,96■■■■■ 4,15
Shf-201ENSMUST00000048635 Plekhg3Q4VAC9 1341 aa40,94■■■■■ 4,14
Shf-201ENSMUST00000048635 Mug1P28665 1476 aa40,94■■■■■ 4,14
Shf-201ENSMUST00000048635 Fancd2Q80V62 1450 aa40,93■■■■■ 4,14
Shf-201ENSMUST00000048635 Fam163aQ8CAA5 168 aa40,9■■■■■ 4,14
Shf-201ENSMUST00000048635 Wdr7Q920I9 1489 aa40,89■■■■■ 4,14
Shf-201ENSMUST00000048635 Cdc42bpaQ3UU96 1719 aa40,88■■■■■ 4,13
Shf-201ENSMUST00000048635 Setbp1Q9Z180 1582 aa40,87■■■■■ 4,13
Shf-201ENSMUST00000048635 Ncoa3O09000 1398 aa40,86■■■■■ 4,13
Shf-201ENSMUST00000048635 Kiaa1551Q5DTW7 1521 aa40,84■■■■■ 4,13
Shf-201ENSMUST00000048635 Lmod2Q3UHZ5 550 aa40,84■■■■■ 4,13
Shf-201ENSMUST00000048635 Ak9G3UYQ4 1894 aa40,8■■■■■ 4,12
Shf-201ENSMUST00000048635 Mapkbp1Q6NS57 1503 aa40,78■■■■■ 4,12
Shf-201ENSMUST00000048635 NexmifQ5DTT1 1515 aa40,76■■■■■ 4,12
Shf-201ENSMUST00000048635 Prex2Q3LAC4 1598 aa40,76■■■■■ 4,12
Shf-201ENSMUST00000048635 Lrrc9Q8CDN9 1456 aa40,74■■■■■ 4,11
Shf-201ENSMUST00000048635 Lmtk2Q3TYD6 1471 aa40,73■■■■■ 4,11
Shf-201ENSMUST00000048635 Pprc1Q6NZN1 1644 aa40,7■■■■■ 4,11
Shf-201ENSMUST00000048635 Abca8bQ8K440 1620 aa40,69■■■■■ 4,1
Shf-201ENSMUST00000048635 Atp10dQ8K2X1 1416 aa40,68■■■■■ 4,1
Shf-201ENSMUST00000048635 Fam208aQ69ZR9 1610 aaKnown RBP40,63■■■■■ 4,1
Shf-201ENSMUST00000048635 Ifnlr1Q8CGK5 535 aa40,58■■■■■ 4,09
Shf-201ENSMUST00000048635 Znf608Q56A10 1511 aa40,55■■■■■ 4,08
Shf-201ENSMUST00000048635 Ttbk1Q6PCN3 1308 aa40,53■■■■■ 4,08
Retrieved 100 of 22,080 RNA–protein pairs in 11,3 ms