RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Polr1aO35134 1717 aaKnown RBP42.53■■■■■ 4.4
Shf-201ENSMUST00000048635 Clip1Q922J3 1391 aa42.5■■■■■ 4.39
Shf-201ENSMUST00000048635 EprsQ8CGC7 1512 aaKnown RBP42.44■■■■■ 4.39
Shf-201ENSMUST00000048635 Adamts12Q811B3 1600 aa42.42■■■■■ 4.38
Shf-201ENSMUST00000048635 TchhA0A0B4J1F9 1599 aa42.37■■■■■ 4.37
Shf-201ENSMUST00000048635 Shroom2A2ALU4 1481 aa42.36■■■■■ 4.37
Shf-201ENSMUST00000048635 Myt1lP97500 1187 aa42.36■■■■■ 4.37
Shf-201ENSMUST00000048635 Rpap1Q80TE0 1409 aa42.33■■■■■ 4.37
Shf-201ENSMUST00000048635 WizO88286 1684 aaKnown RBP42.31■■■■■ 4.36
Shf-201ENSMUST00000048635 Abca16E9PWJ7 1678 aa42.29■■■■■ 4.36
Shf-201ENSMUST00000048635 Fgd6Q69ZL1 1399 aa42.24■■■■■ 4.35
Shf-201ENSMUST00000048635 Fyco1Q8VDC1 1437 aa42.14■■■■■ 4.34
Shf-201ENSMUST00000048635 Cux1P53564 1515 aa42.12■■■■■ 4.33
Shf-201ENSMUST00000048635 CadpsQ80TJ1 1355 aa42.12■■■■■ 4.33
Shf-201ENSMUST00000048635 Gm7298A0A0N4SVU1 1476 aa42.1■■■■■ 4.33
Shf-201ENSMUST00000048635 PxdnQ3UQ28 1475 aa42.1■■■■■ 4.33
Shf-201ENSMUST00000048635 Abca5Q8K448 1642 aa42.08■■■■■ 4.33
Shf-201ENSMUST00000048635 Abcc2Q8VI47 1543 aa42.07■■■■■ 4.33
Shf-201ENSMUST00000048635 Dnmt1P13864 1620 aaKnown RBP42.04■■■■■ 4.32
Shf-201ENSMUST00000048635 Soga1E1U8D0 1418 aa42.04■■■■■ 4.32
Shf-201ENSMUST00000048635 Map3k4O08648 1597 aa42.03■■■■■ 4.32
Shf-201ENSMUST00000048635 Ankrd26Q811D2 1581 aa42.03■■■■■ 4.32
Shf-201ENSMUST00000048635 Pabpn1Q8CCS6 302 aaKnown RBP42.02■■■■■ 4.32
Shf-201ENSMUST00000048635 Erich3F6QRE9 1637 aa41.99■■■■■ 4.31
Shf-201ENSMUST00000048635 Eea1Q8BL66 1411 aa41.95■■■■■ 4.31
Shf-201ENSMUST00000048635 Arhgap27A2AB59 869 aa41.95■■■■■ 4.31
Shf-201ENSMUST00000048635 AknaQ80VW7 1404 aa41.89■■■■■ 4.3
Shf-201ENSMUST00000048635 Setd5Q5XJV7 1441 aa41.88■■■■■ 4.29
Shf-201ENSMUST00000048635 BC005561E9Q5E2 1589 aa41.81■■■■■ 4.28
Shf-201ENSMUST00000048635 Slx4Q6P1D7 1565 aa41.81■■■■■ 4.28
Shf-201ENSMUST00000048635 Abcc1O35379 1528 aa41.79■■■■■ 4.28
Shf-201ENSMUST00000048635 Pelp1Q9DBD5 1123 aaKnown RBP41.78■■■■■ 4.28
Shf-201ENSMUST00000048635 Lmo7E9PYF4 1699 aaKnown RBP41.75■■■■■ 4.27
Shf-201ENSMUST00000048635 Neo1P97798 1493 aa41.75■■■■■ 4.27
Shf-201ENSMUST00000048635 Chd1P40201 1711 aa41.74■■■■■ 4.27
Shf-201ENSMUST00000048635 WrnO09053 1401 aa41.65■■■■■ 4.26
Shf-201ENSMUST00000048635 Gm14025A2AP89 1413 aa41.62■■■■■ 4.25
Shf-201ENSMUST00000048635 Pcf11G3X9Z4 1553 aa41.6■■■■■ 4.25
Shf-201ENSMUST00000048635 Arap1Q4LDD4 1452 aa41.58■■■■■ 4.25
Shf-201ENSMUST00000048635 Aebp1Q640N1 1128 aa41.57■■■■■ 4.25
Shf-201ENSMUST00000048635 Zcchc11B2RX14 1644 aaKnown RBP41.57■■■■■ 4.24
Shf-201ENSMUST00000048635 Rrbp1Q99PL5 1605 aaKnown RBP41.56■■■■■ 4.24
Shf-201ENSMUST00000048635 Arhgef12Q8R4H2 1543 aaKnown RBP41.55■■■■■ 4.24
Shf-201ENSMUST00000048635 BlmO88700 1416 aa41.52■■■■■ 4.24
Shf-201ENSMUST00000048635 Gapvd1Q6PAR5 1458 aa41.52■■■■■ 4.24
Shf-201ENSMUST00000048635 Arhgef5E9Q7D5 1581 aa41.51■■■■■ 4.24
Shf-201ENSMUST00000048635 Jph4Q80WT0 628 aa41.5■■■■■ 4.23
Shf-201ENSMUST00000048635 Col17a1Q07563 1470 aa41.46■■■■■ 4.23
Shf-201ENSMUST00000048635 CntlnA2AM05 1397 aa41.44■■■■■ 4.22
Shf-201ENSMUST00000048635 Cep170Q6A065 1588 aa41.43■■■■■ 4.22
Shf-201ENSMUST00000048635 Ythdc2B2RR83 1445 aaKnown RBP41.39■■■■■ 4.22
Shf-201ENSMUST00000048635 Kif27Q7M6Z4 1394 aa41.38■■■■■ 4.21
Shf-201ENSMUST00000048635 Peg3Q3URU2 1571 aa41.37■■■■■ 4.21
Shf-201ENSMUST00000048635 Rapgef6Q5NCJ1 1609 aa41.35■■■■■ 4.21
Shf-201ENSMUST00000048635 Ap3b1Q9Z1T1 1105 aa41.34■■■■■ 4.21
Shf-201ENSMUST00000048635 Tiam1Q60610 1591 aa41.31■■■■■ 4.2
Shf-201ENSMUST00000048635 Ccdc141E9Q8Q6 1531 aa41.29■■■■■ 4.2
Shf-201ENSMUST00000048635 Arhgap31A6X8Z5 1425 aa41.29■■■■■ 4.2
Shf-201ENSMUST00000048635 Ncoa2Q61026 1462 aa41.26■■■■■ 4.2
Shf-201ENSMUST00000048635 PtprtQ99M80 1454 aa41.21■■■■■ 4.19
Shf-201ENSMUST00000048635 Naip1Q9QWK5 1403 aa41.2■■■■■ 4.19
Shf-201ENSMUST00000048635 Kdm5bQ80Y84 1544 aa41.2■■■■■ 4.19
Shf-201ENSMUST00000048635 Adgrl3Q80TS3 1537 aa41.18■■■■■ 4.18
Shf-201ENSMUST00000048635 Dnajc5P60904 198 aa41.11■■■■■ 4.17
Shf-201ENSMUST00000048635 AI481877A2ALV5 1481 aa41.1■■■■■ 4.17
Shf-201ENSMUST00000048635 Gm156Q58A37 223 aa41.1■■■■■ 4.17
Shf-201ENSMUST00000048635 Igf1rQ60751 1373 aa41.07■■■■■ 4.16
Shf-201ENSMUST00000048635 Arhgef11Q68FM7 1552 aa41.07■■■■■ 4.16
Shf-201ENSMUST00000048635 Mroh2aD3Z750 1679 aa41.05■■■■■ 4.16
Shf-201ENSMUST00000048635 Gm1043A0A140LJC2 1431 aa41.03■■■■■ 4.16
Shf-201ENSMUST00000048635 Gcc2Q8CHG3 1679 aa41.02■■■■■ 4.16
Shf-201ENSMUST00000048635 Cul7Q8VE73 1689 aa41■■■■■ 4.15
Shf-201ENSMUST00000048635 NhsB1AV60 1647 aa41■■■■■ 4.15
Shf-201ENSMUST00000048635 Magi1Q6RHR9 1471 aa40.99■■■■■ 4.15
Shf-201ENSMUST00000048635 Kiaa1210E9Q0C6 1637 aa40.98■■■■■ 4.15
Shf-201ENSMUST00000048635 Dhx57Q6P5D3 1388 aaKnown RBP40.98■■■■■ 4.15
Shf-201ENSMUST00000048635 Fkbp15Q6P9Q6 1216 aaKnown RBP40.96■■■■■ 4.15
Shf-201ENSMUST00000048635 Plekhg3Q4VAC9 1341 aa40.94■■■■■ 4.14
Shf-201ENSMUST00000048635 Mug1P28665 1476 aa40.94■■■■■ 4.14
Shf-201ENSMUST00000048635 Fancd2Q80V62 1450 aa40.93■■■■■ 4.14
Shf-201ENSMUST00000048635 Fam163aQ8CAA5 168 aa40.9■■■■■ 4.14
Shf-201ENSMUST00000048635 Wdr7Q920I9 1489 aa40.89■■■■■ 4.14
Shf-201ENSMUST00000048635 Cdc42bpaQ3UU96 1719 aa40.88■■■■■ 4.13
Shf-201ENSMUST00000048635 Setbp1Q9Z180 1582 aa40.87■■■■■ 4.13
Shf-201ENSMUST00000048635 Ncoa3O09000 1398 aa40.86■■■■■ 4.13
Shf-201ENSMUST00000048635 Kiaa1551Q5DTW7 1521 aa40.84■■■■■ 4.13
Shf-201ENSMUST00000048635 Lmod2Q3UHZ5 550 aa40.84■■■■■ 4.13
Shf-201ENSMUST00000048635 Ak9G3UYQ4 1894 aa40.8■■■■■ 4.12
Shf-201ENSMUST00000048635 Mapkbp1Q6NS57 1503 aa40.78■■■■■ 4.12
Shf-201ENSMUST00000048635 NexmifQ5DTT1 1515 aa40.76■■■■■ 4.12
Shf-201ENSMUST00000048635 Prex2Q3LAC4 1598 aa40.76■■■■■ 4.12
Shf-201ENSMUST00000048635 Lrrc9Q8CDN9 1456 aa40.74■■■■■ 4.11
Shf-201ENSMUST00000048635 Lmtk2Q3TYD6 1471 aa40.73■■■■■ 4.11
Shf-201ENSMUST00000048635 Pprc1Q6NZN1 1644 aa40.7■■■■■ 4.11
Shf-201ENSMUST00000048635 Abca8bQ8K440 1620 aa40.69■■■■■ 4.1
Shf-201ENSMUST00000048635 Atp10dQ8K2X1 1416 aa40.68■■■■■ 4.1
Shf-201ENSMUST00000048635 Fam208aQ69ZR9 1610 aaKnown RBP40.63■■■■■ 4.1
Shf-201ENSMUST00000048635 Ifnlr1Q8CGK5 535 aa40.58■■■■■ 4.09
Shf-201ENSMUST00000048635 Znf608Q56A10 1511 aa40.55■■■■■ 4.08
Shf-201ENSMUST00000048635 Ttbk1Q6PCN3 1308 aa40.53■■■■■ 4.08
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms