RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Naip1Q9QWK5 1403 aa14.02□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Setd1bQ8CFT2 1985 aa14□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Ubl4bQ9CQ84 188 aa13.99□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Abca5Q8K448 1642 aa13.99□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Magi3Q9EQJ9 1476 aa13.98□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Dhx29Q6PGC1 1365 aaKnown RBP13.97□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Npm2Q80W85 207 aa13.97□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Pla2r1Q62028 1487 aa13.97□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 Setd5Q5XJV7 1441 aa13.96□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 Pbrm1Q8BSQ9 1634 aaKnown RBP13.95□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 EprsQ8CGC7 1512 aaKnown RBP13.95□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 Adamts12Q811B3 1600 aa13.94□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 BlmO88700 1416 aa13.94□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 Rpap1Q80TE0 1409 aa13.94□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 Pcgf6Q99NA9 353 aa13.93□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 Fyco1Q8VDC1 1437 aa13.93□□□□□ -0.18
Ctnna1-201ENSMUST00000042345 Myt1lP97500 1187 aa13.89□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Gm1043A0A140LJC2 1431 aa13.89□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 CntlnA2AM05 1397 aa13.89□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Disp1Q3TDN0 1521 aa13.87□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Il27Q8K3I6 234 aa13.87□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Npm1Q61937 292 aaKnown RBP13.86□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Rad54l2Q99NG0 1466 aa13.86□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Lmtk2Q3TYD6 1471 aa13.85□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Grin2aP35436 1464 aa13.85□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 Abca16E9PWJ7 1678 aa13.84□□□□□ -0.19
Ctnna1-201ENSMUST00000042345 3425401B19RikD3Z1D3 1412 aa13.83□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Nup160Q9Z0W3 1402 aaKnown RBP13.82□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Gcc2Q8CHG3 1679 aa13.82□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 UbtfP25976 765 aaKnown RBP13.81□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Plb1Q3TTY0 1478 aa13.81□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 WizO88286 1684 aaKnown RBP13.8□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Plekhg3Q4VAC9 1341 aa13.8□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Dnajc5bQ9CQ94 199 aa13.79□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Lrriq1Q0P5X1 1673 aa13.79□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Fhod3Q76LL6 1578 aa13.78□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 CadpsQ80TJ1 1355 aa13.78□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Soga1E1U8D0 1418 aa13.77□□□□□ -0.2
Ctnna1-201ENSMUST00000042345 Supt5hO55201 1082 aaKnown RBP13.77□□□□□ -0.21
Ctnna1-201ENSMUST00000042345 Ift140E9PY46 1464 aa13.77□□□□□ -0.21
Ctnna1-201ENSMUST00000042345 Gm7298A0A0N4SVU1 1476 aa13.75□□□□□ -0.21
Ctnna1-201ENSMUST00000042345 Abcc2Q8VI47 1543 aa13.74□□□□□ -0.21
Ctnna1-201ENSMUST00000042345 Dennd4bQ3U1Y4 1499 aa13.72□□□□□ -0.21
Ctnna1-201ENSMUST00000042345 Cul7Q8VE73 1689 aa13.72□□□□□ -0.21
Ctnna1-201ENSMUST00000042345 PxdnQ3UQ28 1475 aa13.71□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Naip2Q9QUK4 1447 aa13.7□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Zcchc11B2RX14 1644 aaKnown RBP13.7□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Fhad1A6PWD2 1420 aa13.7□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Aebp1Q640N1 1128 aa13.68□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Vps8Q0P5W1 1427 aa13.67□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Cdc42bpaQ3UU96 1719 aa13.67□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Setbp1Q9Z180 1582 aa13.66□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 BC005561E9Q5E2 1589 aa13.65□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 A2mQ6GQT1 1474 aa13.65□□□□□ -0.22
Ctnna1-201ENSMUST00000042345 Rapgef6Q5NCJ1 1609 aa13.64□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Map3k4O08648 1597 aa13.64□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Kiaa1551Q5DTW7 1521 aa13.63□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Arhgef11Q68FM7 1552 aa13.63□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Eif4g3Q80XI3 1579 aaKnown RBP13.63□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Ankrd36D3Z4K0 1415 aa13.62□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Rusc2Q80U22 1514 aa13.62□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 NexmifQ5DTT1 1515 aa13.61□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Cc2d2bA0A286YDU8 1405 aa13.61□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Dnmt1P13864 1620 aaKnown RBP13.61□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Shroom2A2ALU4 1481 aa13.6□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Kif21bQ9QXL1 1668 aa13.59□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Mia2Q91ZV0 1396 aa13.59□□□□□ -0.23
Ctnna1-201ENSMUST00000042345 Zeb1Q64318 1117 aa13.58□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Rfx7F8VPJ6 1459 aa13.58□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Ap3b1Q9Z1T1 1105 aa13.58□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Camsap2Q8C1B1 1461 aa13.57□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Sall2Q9QX96 1004 aa13.57□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 UacaQ8CGB3 1411 aa13.57□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Mroh2aD3Z750 1679 aa13.55□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 TonslQ6NZL6 1363 aa13.54□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Mug1P28665 1476 aa13.53□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Aebp2Q9Z248 504 aaKnown RBP13.53□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Ncoa3O09000 1398 aa13.53□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Lamc1P02468 1607 aaKnown RBP13.53□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Ccnb3Q810T2 1396 aa13.52□□□□□ -0.24
Ctnna1-201ENSMUST00000042345 Mapkbp1Q6NS57 1503 aa13.52□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Kdm6bQ5NCY0 1641 aa13.51□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Kif27Q7M6Z4 1394 aa13.51□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Pprc1Q6NZN1 1644 aa13.5□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Rrbp1Q99PL5 1605 aaKnown RBP13.5□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Arhgef40Q3UPH7 1517 aa13.49□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Adcy10Q8C0T9 1614 aa13.49□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 SphkapQ6NSW3 1687 aa13.48□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 ClspnQ80YR7 1315 aa13.47□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 Fam208aQ69ZR9 1610 aaKnown RBP13.47□□□□□ -0.25
Ctnna1-201ENSMUST00000042345 WrnO09053 1401 aa13.45□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Kiaa1210E9Q0C6 1637 aa13.44□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Kdm3bQ6ZPY7 1562 aa13.44□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Las1lA2BE28 776 aaKnown RBP13.44□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Ncoa2Q61026 1462 aa13.44□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Ccer2J3QPU5 274 aa13.43□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Abcc5Q9R1X5 1436 aa13.43□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Pdcd11Q6NS46 1862 aaKnown RBP13.42□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Arhgef12Q8R4H2 1543 aaKnown RBP13.41□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Naip5Q9R016 1403 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms